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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20884
         (785 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)          31   1.4  
SB_29795| Best HMM Match : ResIII (HMM E-Value=0.16)                   31   1.4  
SB_25339| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.4  
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)               30   2.4  
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)                   29   4.3  
SB_3454| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.3  
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_52263| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_56837| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)                       29   5.6  
SB_2118| Best HMM Match : PAN (HMM E-Value=0.0011)                     28   7.5  
SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14)                28   7.5  
SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82)              28   9.9  
SB_23498| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_52466| Best HMM Match : Cation_ATPase_C (HMM E-Value=6.7e-12)       28   9.9  
SB_6064| Best HMM Match : DDHD (HMM E-Value=8e-05)                     28   9.9  

>SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)
          Length = 1001

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = +2

Query: 92   EPRKNRLSIDGGQVKEDEHVATYKAIPESDTEFRSSKTNLGKSKEKISADGAEENY*RRK 271
            EP++NR  ID   VK + H  ++++ P S T  R  K ++ K  +    D  +E     +
Sbjct: 924  EPKENRAPIDVTLVKTENHNPSFQS-PLSPT--RGKKPSVKKKGKVPKKDKTQEKEVEPR 980

Query: 272  TRPKS*PVW 298
              PKS   W
Sbjct: 981  ENPKSPDEW 989


>SB_29795| Best HMM Match : ResIII (HMM E-Value=0.16)
          Length = 818

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
 Frame = +1

Query: 220 EGEDICRRRRGELLKKEDEAKIITRVDMSDAKYVVG-----------DHRNGDAKIEL-D 363
           EG D+  R  G+  +  DE+ I+ R D  +A Y+             +H +G   I+  D
Sbjct: 293 EGRDLAVRFVGKCARHGDESSIVVR-DREEAAYLTNLLAGTDHLLNFEHADGAHLIQYKD 351

Query: 364 ANKRQFTGMTREEVLKYADDPF---WVNLRWSLFVLFWVA 474
           A +R    + RE+VL+   D     W   R + F ++ VA
Sbjct: 352 ALRRMLRRIPREDVLRVCTDAIYAQWCKARGAKFEVWRVA 391


>SB_25339| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1049

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -3

Query: 462 QHEQRPTQVHPERIVSI-LQYLLSRHPSELPFISIEFNLRVTIPVVPDDI 316
           Q+ +  T V P+R +S+ L YL+++ P + PF      L V++PV  D +
Sbjct: 301 QNPRLRTSVRPKRPLSVMLSYLMNKWPVKSPFTGEAQELCVSVPVGFDSL 350


>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
          Length = 1079

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +1

Query: 202 NEPRQIEGEDICRRRRGELLKKEDEAKIITRVDMSDAKYVVGDHRNGDAK---IELDANK 372
           N+PRQ  G    RRR  +  +K  ++K   +      ++   +HR  + K    E+DA K
Sbjct: 742 NDPRQNRGRHHHRRRHNKKNRKHRKSK---KNKNHRRRHSAHEHRKDNDKEKIFEMDAKK 798

Query: 373 RQFTGMTREE 402
            Q  G T +E
Sbjct: 799 EQENGNTNDE 808


>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3213

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 22   IVKGLLSRSEKLVLRV*YTINDVGATEKPSLD*W 123
            +V+ LL   E+LVLR  Y   D+GA  +  L+ W
Sbjct: 2136 LVQALLETGEQLVLRGHYAERDIGAKSQMLLELW 2169


>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
          Length = 300

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = +2

Query: 446 GRCSCCSGWPG--CACSPG 496
           G C C  GW G  C CSPG
Sbjct: 245 GTCQCKPGWTGIDCECSPG 263


>SB_3454| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 123

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 449 RCSCCSGWPGCACSPG 496
           RC+C SGW G +C  G
Sbjct: 68  RCNCMSGWQGLSCEVG 83


>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1822

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -2

Query: 775 SSGSINNHSYSDLLNFVEQNFEFVQCVTFVEHS*VGTWTNTP 650
           +SGSI NH +  +++FV+   +  + +  V H    +++ TP
Sbjct: 379 ASGSIRNHQWPHIIDFVKSTVDGFEILESVTHVGAISYSTTP 420


>SB_52263| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1024

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
 Frame = +1

Query: 220 EGEDICRRRRGELLKKEDEAKIITRVDMSDAKYVVG-----------DHRNGDAKIEL-D 363
           EG D+  R  G+  +  DE+ I+ R D  +A Y+             +H +G   I+  D
Sbjct: 531 EGRDLAVRYVGKCARHGDESSIVVR-DREEAAYLTNLLAGTDHLLNFEHADGAHLIQYKD 589

Query: 364 ANKRQFTGMTREEVLKYADDPFW 432
           A +R    + RE+VL+   D  +
Sbjct: 590 ALRRMLRRIPREDVLRVCTDAIY 612


>SB_56837| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 730

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 446 GRCSCCSGWPGCACS 490
           GRC C  GW G ACS
Sbjct: 374 GRCDCKPGWYGSACS 388


>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
          Length = 960

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 446 GRCSCCSGWPGCACS 490
           GRCSC +GW G +C+
Sbjct: 685 GRCSCGTGWTGPSCN 699


>SB_2118| Best HMM Match : PAN (HMM E-Value=0.0011)
          Length = 521

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 20/69 (28%), Positives = 29/69 (42%)
 Frame = +1

Query: 541 PGHGTNSVLWSDWSWSMPSNHKIYNRIWNC*RHSKFRACSSKCRLTNARQT*HTGRIQNS 720
           P H  N + W +W +    +   Y    N  +H  F A +S    T+ R T      Q S
Sbjct: 356 PLHAVNGLEWKEWMYCPTVDKSNYWPAINTSQHEAFEALASV--NTDQRST-QVNTDQRS 412

Query: 721 VQQN*EDRS 747
           +Q N + RS
Sbjct: 413 IQVNTDKRS 421


>SB_16758| Best HMM Match : EGF_CA (HMM E-Value=5.5e-14)
          Length = 338

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = +2

Query: 449 RCSCCSGWPGCACSPG--LLQSCTRSQVRPAR 538
           RC C  G+ G AC  G  L    T S V+P +
Sbjct: 143 RCECPQGYTGAACETGWRLKNPITSSDVKPEK 174


>SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82)
          Length = 1642

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +1

Query: 403 VLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVMYALPSAARPNPGH 549
           V+  A  P W      L    ++A+L  LA  +A   A P+A  P P +
Sbjct: 12  VIAAAKPPVWKASHEQLLPALYIAFLINLAKNVAAEGAEPAAQEPKPAY 60


>SB_23498| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 661

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 205 EPRQIEGEDICRRRRGELLKKEDEAKIITRVDMSDAKYV 321
           +P+  EG D+  R  G+  ++ DE+ I+ R D  +A Y+
Sbjct: 427 DPQYPEGRDLAVRFVGKCARRGDESSIVVR-DREEAAYL 464


>SB_52466| Best HMM Match : Cation_ATPase_C (HMM E-Value=6.7e-12)
          Length = 573

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 410 FSTSSLVIPVNCRLLASSSIFASPFLW 330
           F    L   VNCR ++S ++F+ PF W
Sbjct: 331 FILMQLFNEVNCRRVSSRNVFSGPFDW 357


>SB_6064| Best HMM Match : DDHD (HMM E-Value=8e-05)
          Length = 295

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 292 RVDMSDAKYVVGD-HRNGDAKIELDANKRQFTGMTREEVLKYA 417
           RV++S A+  V +      ++IE D N+R   G T E+V +YA
Sbjct: 140 RVELSKARSKVMELEAKLKSQIEFDQNRRGENGSTAEDVCQYA 182


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,943,254
Number of Sequences: 59808
Number of extensions: 563621
Number of successful extensions: 1935
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1932
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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