Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20880
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   2.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   6.0  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   6.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.0  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 606 IVVKNILFMFCYIYNKLFCDKFSNTGMSYYSTICI 710
           I    I+F FCY Y  +     S  G  ++S + I
Sbjct: 544 IQFNTIVFAFCYCYYSISIRPISTLGWFFWSLLRI 578


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 98  ISFMFKVGHFSCYFTTRNIL 39
           +SF F +  F  +FTT NI+
Sbjct: 237 VSFYFFISTFFYFFTTGNII 256


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 98  ISFMFKVGHFSCYFTTRNIL 39
           +SF F +  F  +FTT NI+
Sbjct: 233 VSFYFFISTFFYFFTTGNII 252


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 225 VQAQPMGPEPQV*PAPPVMRPS 290
           V+ +P  PEP     PP+  PS
Sbjct: 19  VRKRPHSPEPYPPRCPPIYEPS 40


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 496 LFQLAYIYLSSTVYSLVNFILNVSQYIL 579
           LF + YIY S    S++NF   ++++++
Sbjct: 153 LFTVYYIYYSVHEASIINFGYTLAKFMI 180


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 458 NLYRFQCRRCN 426
           N+YR+ CR C+
Sbjct: 283 NVYRYSCRDCS 293


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 458 NLYRFQCRRCN 426
           N+YR+ CR C+
Sbjct: 41  NVYRYSCRDCS 51


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/32 (21%), Positives = 13/32 (40%)
 Frame = +2

Query: 329 LFALILCLIGCWPCACIPYCMESCQNATHYCP 424
           +F+  +     W CA + Y +       +Y P
Sbjct: 38  VFSFAVTFFSAWICALVNYNVSEISENFYYLP 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,491
Number of Sequences: 336
Number of extensions: 4107
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)