Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20880
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 73 1e-12
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 73 1e-12
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 73 1e-12
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 73 1e-12
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 73 1e-12
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 73 1e-12
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 73 1e-12
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 73 1e-12
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 73 1e-12
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 73 1e-12
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 73 1e-12
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 73 1e-12
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 73 1e-12
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 56 2e-07
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 56 2e-07
BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for IM... 56 2e-07
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 56 2e-07
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 56 2e-07
AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open read... 48 5e-05
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 33 1.4
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 33 1.4
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 1.4
U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Fac... 32 1.9
AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein. 32 1.9
M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subu... 31 3.3
EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot... 31 3.3
EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot... 31 3.3
EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel, voltage... 31 3.3
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ... 31 3.3
AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel ... 31 3.3
AY043484-1|AAK95360.1| 1998|Homo sapiens voltage-gated sodium ch... 31 3.3
AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium ch... 31 3.3
AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel ... 31 3.3
AC010127-1|AAX81984.1| 1998|Homo sapiens unknown protein. 31 3.3
AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium ch... 31 3.3
AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium ch... 31 3.3
AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium ch... 31 3.3
AB098335-1|BAC45228.1| 1981|Homo sapiens Voltage-gated sodium ch... 31 3.3
AB093549-1|BAC21102.1| 1998|Homo sapiens Voltage-gated sodium ch... 31 3.3
AB093548-1|BAC21101.1| 2009|Homo sapiens voltage-gated sodium ch... 31 3.3
X82835-1|CAA58042.1| 1977|Homo sapiens sodium channel alpha subu... 31 5.8
DQ857292-1|ABI51981.1| 1977|Homo sapiens voltage-gated sodium ch... 31 5.8
AJ251507-1|CAB85895.1| 1951|Homo sapiens type III sodium channel... 31 5.8
AF330135-2|AAG53415.1| 1951|Homo sapiens voltage-gated sodium ch... 31 5.8
AF330135-1|AAG53414.1| 1951|Homo sapiens voltage-gated sodium ch... 31 5.8
AF225987-1|AAK00219.1| 2000|Homo sapiens voltage-gated sodium ch... 31 5.8
AF225986-1|AAK00218.1| 1951|Homo sapiens voltage-gated sodium ch... 31 5.8
AF035686-1|AAC29515.1| 1366|Homo sapiens voltage-gated sodium ch... 31 5.8
AF035685-1|AAC29514.1| 1366|Homo sapiens voltage-gated sodium ch... 31 5.8
AC108146-1|AAY14794.1| 1146|Homo sapiens unknown protein. 31 5.8
AC013463-1|AAY15072.1| 2000|Homo sapiens unknown protein. 31 5.8
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPNCNA 436
+ CPSC+ IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPNC A
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 437 YIGTY 451
+GTY
Sbjct: 154 LLGTY 158
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 266 CPSCHAAIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCMESCQNATHYCPNCNAYI 442
CP C AI T++ ++ + C +GC C IP + ++ TH CP+C AYI
Sbjct: 142 CPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYI 201
Query: 443 GTY 451
TY
Sbjct: 202 YTY 204
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 266 CPSCHAAIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCMESCQNATHYCPNCNAYI 442
CP C AI T++ ++ + C +GC C IP + ++ TH CP+C AYI
Sbjct: 142 CPHCQQAIATKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYI 201
Query: 443 GTY 451
TY
Sbjct: 202 YTY 204
>BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for
IMAGE:3350242) protein.
Length = 125
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 266 CPSCHAAIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCMESCQNATHYCPNCNAYI 442
CP C AI T++ ++ + C +GC C IP + ++ TH CP+C AYI
Sbjct: 59 CPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYI 118
Query: 443 GTY 451
TY
Sbjct: 119 YTY 121
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 266 CPSCHAAIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCMESCQNATHYCPNCNAYI 442
CP C AI T++ ++ + C +GC C IP + ++ TH CP+C AYI
Sbjct: 142 CPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYI 201
Query: 443 GTY 451
TY
Sbjct: 202 YTY 204
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 266 CPSCHAAIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCMESCQNATHYCPNCNAYI 442
CP C AI T++ ++ + C +GC C IP + ++ TH CP+C AYI
Sbjct: 142 CPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYI 201
Query: 443 GTY 451
TY
Sbjct: 202 YTY 204
>AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 261
Score = 47.6 bits (108), Expect = 5e-05
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 266 CPSCHAAIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCMESCQNATHYCPNCNA 436
CP C AI T++ ++ + C +GC C IP + ++ TH CP+C A
Sbjct: 142 CPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKA 199
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 359 CWPCACIPYCMESCQNATHYCPNCNAYIGTYTN**VCDKC 478
C PC C + ESC + T C NC + G CDKC
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTGGP----YCDKC 788
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain
protein.
Length = 3110
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 359 CWPCACIPYCMESCQNATHYCPNCNAYIGTYTN**VCDKC 478
C PC C + ESC + T C NC + G CDKC
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTGGP----YCDKC 788
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 359 CWPCACIPYCMESCQNATHYCPNCNAYIGTYTN**VCDKC 478
C PC C + ESC + T C NC + G CDKC
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTGGP----YCDKC 788
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 359 CWPCACIPYCMESCQNATHYCPNCNAYIGTYTN**VCDKC 478
C PC C + ESC + T C NC + G CDKC
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTGGP----YCDKC 788
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 359 CWPCACIPYCMESCQNATHYCPNCNAYIGTYTN**VCDKC 478
C PC C + ESC + T C NC + G CDKC
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTGGP----YCDKC 788
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 359 CWPCACIPYCMESCQNATHYCPNCNAYIGTYTN**VCDKC 478
C PC C + ESC + T C NC + G CDKC
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTGGP----YCDKC 788
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 359 CWPCACIPYCMESCQNATHYCPNCNAYIGTYTN**VCDKC 478
C PC C + ESC + T C NC + G CDKC
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTGGP----YCDKC 788
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 359 CWPCACIPYCMESCQNATHYCPNCNAYIGTYTN**VCDKC 478
C PC C + ESC + T C NC + G CDKC
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTGGP----YCDKC 788
>U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Factor
protein.
Length = 228
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIG 358
+ CPSC+ IV+++ ++A + T L LCL+G
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLG 126
>AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein.
Length = 228
Score = 32.3 bits (70), Expect = 1.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 260 LTCPSCHAAIVTRVQHDASSKTHLFALILCLIG 358
+ CPSC+ IV+++ ++A + T L LCL+G
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLG 126
>M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subunit
protein.
Length = 2016
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel
protein.
Length = 1998
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel
protein.
Length = 2016
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel,
voltage-gated, type V, alpha (long QT syndrome 3)
protein.
Length = 2015
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein
type V alpha subunit protein.
Length = 2016
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel
alpha subunit Nav1.5 protein.
Length = 2015
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>AY043484-1|AAK95360.1| 1998|Homo sapiens voltage-gated sodium channel
type I protein.
Length = 1998
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 848 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 907
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C+ +W +N F+
Sbjct: 908 CVCKIASDCQLPRWHMNDFFH 928
>AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium
channel type V alpha subunit jejunal variant protein.
Length = 2015
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel
alpha subunit protein.
Length = 2015
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>AC010127-1|AAX81984.1| 1998|Homo sapiens unknown protein.
Length = 1998
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 848 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 907
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C+ +W +N F+
Sbjct: 908 CVCKIASDCQLPRWHMNDFFH 928
>AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium
channel type V alpha isoform b variant protein.
Length = 1576
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 378 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 427
>AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium
channel splicing variant protein.
Length = 1962
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium
channel protein.
Length = 2016
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 TRRTELCSCRHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTI 153
+R + L R + +LRV K WPTLN + ++G L + L+ I
Sbjct: 799 SRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAI 848
>AB098335-1|BAC45228.1| 1981|Homo sapiens Voltage-gated sodium channel
alpha 1 subunit protein.
Length = 1981
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 831 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 890
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C+ +W +N F+
Sbjct: 891 CVCKIASDCQLPRWHMNDFFH 911
>AB093549-1|BAC21102.1| 1998|Homo sapiens Voltage-gated sodium channel
alpha1 subunit protein.
Length = 1998
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 848 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 907
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C+ +W +N F+
Sbjct: 908 CVCKIASDCQLPRWHMNDFFH 928
>AB093548-1|BAC21101.1| 2009|Homo sapiens voltage-gated sodium channel
alpha1 subunit protein.
Length = 2009
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 859 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD 918
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C+ +W +N F+
Sbjct: 919 CVCKIASDCQLPRWHMNDFFH 939
>X82835-1|CAA58042.1| 1977|Homo sapiens sodium channel alpha subunit
protein.
Length = 1977
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 824 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 884 CVCKINDDCTLPRWHMNDFFH 904
>DQ857292-1|ABI51981.1| 1977|Homo sapiens voltage-gated sodium channel
Nav1.7 protein.
Length = 1977
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 824 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 884 CVCKINDDCTLPRWHMNDFFH 904
>AJ251507-1|CAB85895.1| 1951|Homo sapiens type III sodium channel
protein protein.
Length = 1951
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 802 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 862 CVCKINDDCTLPRWHMNDFFH 882
>AF330135-2|AAG53415.1| 1951|Homo sapiens voltage-gated sodium channel
type III alpha subunit protein.
Length = 1951
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 802 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 862 CVCKINDDCTLPRWHMNDFFH 882
>AF330135-1|AAG53414.1| 1951|Homo sapiens voltage-gated sodium channel
type III alpha subunit protein.
Length = 1951
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 802 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 862 CVCKINDDCTLPRWHMNDFFH 882
>AF225987-1|AAK00219.1| 2000|Homo sapiens voltage-gated sodium channel
alpha subunit SCN3A protein.
Length = 2000
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 851 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 911 CVCKINDDCTLPRWHMNDFFH 931
>AF225986-1|AAK00218.1| 1951|Homo sapiens voltage-gated sodium channel
alpha subunit splice variant SCN3A-s protein.
Length = 1951
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 802 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 862 CVCKINDDCTLPRWHMNDFFH 882
>AF035686-1|AAC29515.1| 1366|Homo sapiens voltage-gated sodium
channel, subtype III protein.
Length = 1366
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 802 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 862 CVCKINDDCTLPRWHMNDFFH 882
>AF035685-1|AAC29514.1| 1366|Homo sapiens voltage-gated sodium
channel, subtype III protein.
Length = 1366
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 802 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 861
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 862 CVCKINDDCTLPRWHMNDFFH 882
>AC108146-1|AAY14794.1| 1146|Homo sapiens unknown protein.
Length = 1146
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 824 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 883
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 884 CVCKINDDCTLPRWHMNDFFH 904
>AC013463-1|AAY15072.1| 2000|Homo sapiens unknown protein.
Length = 2000
Score = 30.7 bits (66), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 31 RHYNILRVVK*QLKWPTLNIKEICLARTMGLLHKIRLLTTISPSKF---HMLMFXXXXXX 201
R + +LRV K WPTLN+ + ++G L + L+ I F M +F
Sbjct: 851 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE 910
Query: 202 XXXXXXXXCKRNQWALNHKFN 264
C +W +N F+
Sbjct: 911 CVCKINDDCTLPRWHMNDFFH 931
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,537,895
Number of Sequences: 237096
Number of extensions: 2116191
Number of successful extensions: 8714
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 8312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8646
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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