Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20874
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457564-1|AAL68794.1|   91|Anopheles gambiae hypothetical prote...    26   1.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.3  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   4.4  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.8  

>AF457564-1|AAL68794.1|   91|Anopheles gambiae hypothetical protein
           17 protein.
          Length = 91

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 167 TKTTTVYLKSVYTVIRTSFLMLCCLVTVISP 259
           T+ TT+ L S Y ++    + +CCL+  I+P
Sbjct: 10  TRETTMKLYSGYRLLVLLVMTVCCLLLFIAP 40


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 16  FSKMSETLKLRGTLRGHNGWVTQ 84
           F K+ E  ++   LRG+  W+TQ
Sbjct: 396 FQKLREKQQIEEDLRGYLDWITQ 418


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 556 MPDLDSSVPTTGYDN 512
           +PD D S P+ GY N
Sbjct: 367 LPDYDDSTPSNGYTN 381


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 489 FSPNHANPLSYPVVGTELSR 548
           FSP    P++ P+VG  +SR
Sbjct: 591 FSPQTQQPVNLPLVGVAVSR 610


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,461
Number of Sequences: 2352
Number of extensions: 18411
Number of successful extensions: 99
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)