Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20874
(751 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 25 1.0
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 25 1.0
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 1.0
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.3
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 4.0
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 5.3
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 5.3
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 5.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 7.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 7.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 7.1
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 7.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 9.3
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.6 bits (51), Expect = 1.0
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -3
Query: 392 TRHYLTVVN*EGYREYILSMVLESS 318
+++Y+T+++ G+R++I +M+ +S
Sbjct: 10 SKYYVTIIDAPGHRDFIKNMITGTS 34
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.6 bits (51), Expect = 1.0
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -3
Query: 392 TRHYLTVVN*EGYREYILSMVLESS 318
+++Y+T+++ G+R++I +M+ +S
Sbjct: 26 SKYYVTIIDAPGHRDFIKNMITGTS 50
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.0
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -3
Query: 392 TRHYLTVVN*EGYREYILSMVLESS 318
+++Y+T+++ G+R++I +M+ +S
Sbjct: 83 SKYYVTIIDAPGHRDFIKNMITGTS 107
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.3
Identities = 7/24 (29%), Positives = 19/24 (79%)
Frame = -3
Query: 389 RHYLTVVN*EGYREYILSMVLESS 318
++Y+T+++ G+R++I +M+ +S
Sbjct: 84 KYYVTIIDAPGHRDFIKNMITGTS 107
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +2
Query: 509 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTV 622
P +S W + W L CKL+ S Y++ +T+
Sbjct: 88 PFELSVFWQQYPWQWGLGICKLRAYVSETSSYVSVLTI 125
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.2 bits (45), Expect = 5.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 344 ILSMVLESSGSLACSEIPQTQSLVPRTGKG*LPSL 240
+L+ L +S L EIP ++ TGKG L SL
Sbjct: 154 LLTFDLTTSQLLKQVEIPHDVAVNATTGKGRLSSL 188
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 5.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 344 ILSMVLESSGSLACSEIPQTQSLVPRTGKG*LPSL 240
+L+ L +S L EIP ++ TGKG L SL
Sbjct: 154 LLTFDLTTSQLLKQVEIPHDVAVNATTGKGRLSSL 188
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 5.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 344 ILSMVLESSGSLACSEIPQTQSLVPRTGKG*LPSL 240
+L+ L +S L EIP ++ TGKG L SL
Sbjct: 154 LLTFDLTTSQLLKQVEIPHDVAVNATTGKGRLSSL 188
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 115 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDV 231
I+SS +KT+ +K + NNY K+LY + ++I +
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 115 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDV 231
I+SS +KT+ +K + NNY K+LY + ++I +
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 115 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDV 231
I+SS +KT+ +K + NNY K+LY + ++I +
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 329 LESSGSLACSEIPQTQSLVPRTGKG*LPSL 240
L++S L EIP ++ TGKG L SL
Sbjct: 160 LKTSNHLKQIEIPHDIAVNATTGKGGLVSL 189
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 9.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -1
Query: 454 SWMVYLHSARVFQSLIVLSREPDTI*RLSTEKATESTSLVW 332
SW + +F L++L+ +++ LS + ST+L W
Sbjct: 2 SWQRVFLAVGLFGVLLLLTNADNSVHILSKYQLITSTTLNW 42
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,059
Number of Sequences: 438
Number of extensions: 5255
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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