Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20873
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40264| Best HMM Match : DUF667 (HMM E-Value=0) 48 1e-05
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 34 0.10
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 34 0.13
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 32 0.41
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_43458| Best HMM Match : MAT1 (HMM E-Value=1.8) 31 0.95
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007) 30 1.7
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_5435| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_33744| Best HMM Match : SMC_N (HMM E-Value=0) 30 2.2
SB_33687| Best HMM Match : Filament (HMM E-Value=0.1) 30 2.2
SB_643| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 29 2.9
SB_58405| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 3.8
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 29 3.8
SB_30188| Best HMM Match : fn1 (HMM E-Value=0.48) 29 3.8
SB_27802| Best HMM Match : Filament (HMM E-Value=0.2) 29 5.1
SB_8393| Best HMM Match : DUF662 (HMM E-Value=3.9e-26) 29 5.1
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 29 5.1
SB_30655| Best HMM Match : DUF1279 (HMM E-Value=0.5) 28 6.7
SB_26622| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 28 6.7
SB_30204| Best HMM Match : DUF1644 (HMM E-Value=7.7) 28 6.7
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 28 6.7
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 6.7
SB_40917| Best HMM Match : Filament (HMM E-Value=1.7) 28 8.9
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_3675| Best HMM Match : TRAP_alpha (HMM E-Value=0) 28 8.9
>SB_40264| Best HMM Match : DUF667 (HMM E-Value=0)
Length = 2074
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 509 WNALRDDFMMGAKMKDWDKE 568
WN LRDDFMMGAK+KDWDKE
Sbjct: 831 WNILRDDFMMGAKLKDWDKE 850
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +1
Query: 73 KKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEK 252
K+ + KK +EEK E E E E + K+EEIN + KK + EK + + +K
Sbjct: 364 KEKERLEKKQREEKDRLEK-KEKKEEEKRKKEEEINAKIEEKKKREEKKKQEEEEKMKKK 422
Query: 253 EE 258
E+
Sbjct: 423 EQ 424
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 33.9 bits (74), Expect = 0.13
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Frame = +1
Query: 16 KILGSSKPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVK-----KEEIN 180
KI + K+K+ K+ + ++K K+EK +I + + K K KEE
Sbjct: 906 KIEKEKREKDKREREEKERKRRQQQLEKEKKEKEKKLLIEKEKREKEKQKERLREKEEKE 965
Query: 181 VEPPAKKVKHEKPSIRIKPNVLEKEEKDY*TK*PLKV*CNYSMQ*EINKNLLRKKWIGMT 360
+ A++ K EK + + + EKEEKD K KV + E +K + ++K +
Sbjct: 966 KQKEAERAKKEKERLLQEDKLHEKEEKDRKDKEKRKV---EKEKREKDKQVEKEKKDSLK 1022
Query: 361 CLKERK 378
+K+RK
Sbjct: 1023 RVKKRK 1028
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 33.9 bits (74), Expect = 0.13
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +3
Query: 213 KTINKN*AKRLRKGRERLLNKIATKGVV-QLFNAVRNQQKSIEKEMDRNDLSEGKKEKIL 389
K + KN AK +G++ LLN +A KGV+ + AV N EK +E K+++L
Sbjct: 673 KELAKNLAKE--EGQKELLNTLAEKGVLNKQGEAVVN-----EKNKQEGKATEENKQEVL 725
Query: 390 KKFDKRTFLDTLMGQSKSIVVDEHVKS-LKDEVKDETDRPNG 512
KK + L+ K ++V E K+ LKD + P G
Sbjct: 726 KKLGESGLLNE---NGKQMLVQEDQKAMLKDLQRQGLLSPQG 764
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = +1
Query: 4 DSISKILGSSKPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINV 183
DS K+ S + ++ + A E +VK+E + E+ E E E KEE
Sbjct: 422 DSSEKMETSKEEAEQQKTAIDDASAGDEEKTEVKKEDATVEIQKERTEEEESSSKEEKKQ 481
Query: 184 EPPAKKVKHEKPSIRIKPNVLEKEEKD 264
E +K+ K ++ S + + + ++KD
Sbjct: 482 ESSSKEEKKQESSSKEEKKQEKDDKKD 508
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 61 LSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPN 240
++ AK E +K E + + E + EIE K KKEE + +K + E+ RI
Sbjct: 895 IAEAKHQQEEREKDMERERTEEKARIMKEIEEKEKKEEAERKAKEEKEREERERKRICQL 954
Query: 241 VLEKEEKD 264
+ EK E++
Sbjct: 955 LKEKAEQE 962
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 31.1 bits (67), Expect = 0.95
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 240 RLRKGRERLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSEGKK 377
R R GR+ L + K L N ++ Q++S+EKE R E K+
Sbjct: 153 RRRSGRQNYLQMLTGKNSSSLVNQLKLQEESLEKERRRQREKEKKE 198
>SB_43458| Best HMM Match : MAT1 (HMM E-Value=1.8)
Length = 230
Score = 31.1 bits (67), Expect = 0.95
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +1
Query: 10 ISKILGSSKPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEP 189
++K+ + +P N + LV+S AK SE+ +K+E EV E E ++K EE E
Sbjct: 17 LNKLGFAYEPTNFRDLVVSSAKVESELKTAIKQE--FREVKEEQRRYEKQLKDEERRQEQ 74
Query: 190 PAKKVKHEKPSIRIKPNVLEKEEK 261
+ + + + ++E+E++
Sbjct: 75 RKRALIENIEREKREKELIEREKR 98
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +3
Query: 237 KRLRKGRERLLNKIATKGVVQLFNAVRNQQKSIEKEM-DRNDLSEGKKEKILKKFDKRTF 413
KR+ + E++ +K+ATK +++ ++ ++Q ++++ + D L K K LK+ R
Sbjct: 3190 KRIDQLDEQVSSKVATKTLMKSYDFTQSQFAALKQRVKDLEQLCMSLKLKELKEEISREV 3249
Query: 414 LDTLMG-QSKSIVVDEHVKSLKDEVKD 491
L + G ++ + V +L+ +V+D
Sbjct: 3250 LAEVSGLMTRLDITSGEVSNLRQQVRD 3276
>SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)
Length = 881
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 324 QKSIEKEMDRNDLSEGKKEKILKKFDK--RTFLDTLMGQSKSIVVDEH-VKSLKDEVKDE 494
++ EK +L + K+EK + +K +T L+ Q+ IVV EH V S +DE+ D+
Sbjct: 652 ERKREKLQKERELKKAKREKERDENEKARKTLLELAKEQALEIVVPEHEVISKEDELDDD 711
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 94 KKVKEEKPSFEVIGEVNEIESKVKKEEINVEP---PAKKVKHEKPSIRIKPNVLEKEEKD 264
++ + KP+ + E ++ SK K ++P P K+VK E+PS+ ++P V K KD
Sbjct: 77 ERPRRAKPAEKTPDESGKVRSKTKDSGSVIDPQGTPLKEVKPEEPSV-VEPEV-AKSAKD 134
>SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1045
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 34 KPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHE 213
K + K+ L ++ K+ E ++ S+E IG + +SK K +++ KKVK
Sbjct: 386 KTQEKQPLEKTKDKEKEEANRRSYNRMASYESIGNIGPEKSKSAKSCESLKEAVKKVKRT 445
Query: 214 KPSI 225
K ++
Sbjct: 446 KQNL 449
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Frame = +1
Query: 34 KPKNKKTLVLSRAKKHSEIVKKVKEE-----KPSFEVIGEVNEIE--SKVKKEEINVEPP 192
K KNKK K + +KK KEE + + E E +IE K K EE +E
Sbjct: 36 KKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEAENEEEKIEETEKEKDEEEKIEEE 95
Query: 193 AKKVKHEKPSIRIKPNVLEKEEKD 264
K+ E+ + E+EEK+
Sbjct: 96 EKEGGEEENEEEEEEETEEEEEKE 119
>SB_5435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 61 LSRAKKHSEIV-----KKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHE 213
+ AKK S+++ K ++EEK +V+ E IES K ++ + AK ++ E
Sbjct: 79 IESAKKTSKLIADSSAKGIEEEKTLTDVVSEAKSIESAKKTSKLIADSSAKGIEEE 134
>SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 255 RERLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSEGKKEKILKKFDKR 407
+E N + TKG L + +NQ+K + K R E KK++ LKK +K+
Sbjct: 39 KEEDKNVVPTKGFANLASLSKNQRKKLLK---RQKYLEEKKDRKLKKKEKQ 86
>SB_33744| Best HMM Match : SMC_N (HMM E-Value=0)
Length = 1014
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 297 QLFNAVRNQQKSIEKEMDRNDLSEGKKEKIL-KKFDKRTF 413
Q F+A+ + IE EM + + +GK+EK++ +KF F
Sbjct: 290 QAFDAIEKSKAKIEGEMKKLNYEDGKEEKLVSRKFPNLQF 329
>SB_33687| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 700
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 291 VVQLFNAVRNQQKSIEKEMDRNDLSEGKKE-KILKKFDKRTFLDTLMGQSKSIVVDEHVK 467
+V + +A Q + +E E + N + + KK+ +ILK D++ DTL ++KS ++DE K
Sbjct: 353 IVDVNHAWDVQYRKLEVETN-NQIGDLKKQLEILKSGDQQKRFDTLWVKAKS-MMDEETK 410
Query: 468 SLKDEVK 488
++ +K
Sbjct: 411 HKENAIK 417
>SB_643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/65 (23%), Positives = 34/65 (52%)
Frame = +1
Query: 52 TLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRI 231
++VL A KH EI ++++ +KP FE + ++E+ E + ++ + S+ +
Sbjct: 468 SVVLGHAIKHMEIQQELEYQKPDFEKLYPYRQLEANGHDLEKRKSNVVRWLEKNRLSVTV 527
Query: 232 KPNVL 246
K ++
Sbjct: 528 KDELV 532
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 97 KVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIK-PNVLEKEEKD 264
++KE+K + + E E + K+E ++ KK + + P+ + K NV + EEKD
Sbjct: 246 EIKEDKTAELELEETTEKSNHAKRENLSPSKIHKKDREKTPTKKNKEKNVKKNEEKD 302
>SB_58405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 139 VNEIESKVKKEEINVEPPAKKVKHEKPSIRI 231
VNE ESK K E N KK+K +K S R+
Sbjct: 687 VNEDESKEKDHEPNARDNKKKLKTKKHSFRV 717
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 243 LRKGRERLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSEGKKEKILKKFDKRTFLDT 422
L+K +RL N+I+ ++ RN+ EK+ + D + KKE + L+
Sbjct: 1864 LKKENDRLQNEISAINRKLVYLETRNENLESEKDRLKKDFANSKKESAELRARLEALLNE 1923
Query: 423 LMG-QSKSIVVDEHVKSLKDEVKDETDR 503
Q++ +V+ + + D+ D+
Sbjct: 1924 KSRLQNEVTLVNRKYTEYRSSIDDKRDK 1951
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 34 KPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEE-INVEPPAKKVKH 210
K + ++ LV KK + ++ K+E+P E + ++ + KKEE ++ EP ++
Sbjct: 247 KEREQEELVEEEPKKEEPVEEETKQEEPVEEEPKQEEAVDEEPKKEEQVDGEPKQEEQVE 306
Query: 211 E 213
E
Sbjct: 307 E 307
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +1
Query: 34 KPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVI---GEVNE---IESKVKKEEINVEPPA 195
KPK ++ V K+ + ++ K+E+P E G+V E +E V++E EP
Sbjct: 84 KPKQEEP-VEEEPKQEEPVEEEQKQEEPVKEEPKQEGQVEEEPKLEEPVEEEPKQEEPVE 142
Query: 196 KKVKHEKPSIRIKPNVLEKEEKD 264
++ K E+P K V E+ + D
Sbjct: 143 EEPKQEEPFEEQKEAVAEESKVD 165
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 16 KILGSSKPKNKKTLVLSRAKKHSEIVKKV-KEEKPSFEVIGEVNEIESKVKKEEINVEPP 192
K L +PK ++T R K EIV++ K+E P E + E + ++EE+ E P
Sbjct: 202 KELVGEEPKTRRTS--RRRTKQEEIVEEEPKQEGPVEEETRQEEPDEKEREQEELVEEEP 259
Query: 193 AKKVKHEKPSIRIKPNVLEKEEK 261
K+ E+ + + +P +E+E K
Sbjct: 260 KKEEPVEEETKQEEP--VEEEPK 280
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +1
Query: 34 KPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHE 213
+PK ++ V KK ++ + K+E+ E + + +IE ++E + EP +K E
Sbjct: 278 EPKQEEA-VDEEPKKEEQVDGEPKQEE-QVEELKQEEQIEEPKQEEPVEEEPKQEKPVEE 335
Query: 214 KPSIRIKPNVLEKEEK 261
+P K +E+E K
Sbjct: 336 EPK---KEEPVEEEPK 348
>SB_30188| Best HMM Match : fn1 (HMM E-Value=0.48)
Length = 334
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 327 KSIEKEMDRNDLSEGKKEKILKKFDKR-TFLDTLMGQSKSIVVDEHVKSLKDEVKDET 497
K EK+MD N + ++ I TF+D+ S S+V + +SLK +V+D T
Sbjct: 188 KGEEKQMDINAIPNNMEKYIAFMLGNHLTFIDSFQFMSSSLVGNLARESLKLKVRDST 245
>SB_27802| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 528
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +3
Query: 297 QLFNAVRNQQKSIEKEMDRNDLSEGKKEKILKKFDKRTFLDTLMGQSKSIVVDEHVKSLK 476
+L + V+ + S+ K+M R KEK L ++ D + + + DE + L+
Sbjct: 143 RLLHEVQRKNDSLAKDMKRVKEKLKAKEKELSAMAEKMSYDQINSFNLAANCDEKLMKLE 202
Query: 477 DEVKDETDR 503
E++++T R
Sbjct: 203 REIREKTAR 211
>SB_8393| Best HMM Match : DUF662 (HMM E-Value=3.9e-26)
Length = 319
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +1
Query: 28 SSKPKNKKTLVLSRAKK-HSEIVKKVKE--EKPSFEVIGE-VNEI--ESKVKKEEINVEP 189
S K KK+ V + +K +I+K+ E E +V E V EI E+ + E ++ P
Sbjct: 38 SLKVVTKKSRVREKIRKSEKKIIKESVESVENDKDQVNDESVREIPRENPAPESERSLSP 97
Query: 190 PAKKVKHEKPS 222
P K++ EKPS
Sbjct: 98 PDSKIQEEKPS 108
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 94 KKVKEEKPSFEVIGE--VNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKEEK 261
K+++EE+ + E EIE + +EEI E K+ + E+ ++ + LEKE K
Sbjct: 316 KRIEEEEQKRKEAEEKKAKEIEQRRMEEEIKKEEEKKRKEAEEKRVKEEQIRLEKERK 373
>SB_30655| Best HMM Match : DUF1279 (HMM E-Value=0.5)
Length = 692
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 1 ADSISKILGSSKPKNKKTLVLSRAKKH--SEIVKKVKEE 111
A +SK L S K++ T+VLS +KK+ SE+V K ++
Sbjct: 639 AGIVSKSLTSKVAKHEDTMVLSESKKNSISELVSKALQD 677
>SB_26622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 1 ADSISKILGSSKPKNKKTLVLSRAKKH--SEIVKKVKEE 111
A +SK L S K++ T+VLS +KK+ SE+V K ++
Sbjct: 580 AGIVSKSLTSKVAKHEDTIVLSESKKNSISELVSKALQD 618
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 73 KKHSEIVKKVKEEKPSFEVIGEV-NEIESKVKK---EEINVEPPAKKVKHEKPSIRIKPN 240
K+++++ +++K+E+ + + NE+ KVKK E+ N+ + + S+ N
Sbjct: 1113 KENTDLKRQLKDEEREKDAVSHTANELRGKVKKSEAEKTNLRRQLDEASQKIASLEETRN 1172
Query: 241 VLEKEEKD 264
L+KE D
Sbjct: 1173 GLQKEAGD 1180
>SB_30204| Best HMM Match : DUF1644 (HMM E-Value=7.7)
Length = 267
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 28 SSKPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVN-EIESKVKKEEINVEPPAKKV 204
SS+ +N S + S V +E S + GE + ++E VKK E + P K
Sbjct: 54 SSEIENIMPAESSEPEHMSVEVSTTEEAASSTKQAGEDHPQVEQAVKKHEERRKKPLKHY 113
Query: 205 KHEKP 219
KH++P
Sbjct: 114 KHKEP 118
>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
Length = 524
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/75 (22%), Positives = 35/75 (46%)
Frame = +1
Query: 40 KNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKP 219
K ++L R K+ ++ + KE+KPSF+ + +K + PP + V +P
Sbjct: 198 KRSESLRKERMKEAEALIAQGKEQKPSFQEQKAPPPVPQTKRKPPAKL-PPRQPVAEPEP 256
Query: 220 SIRIKPNVLEKEEKD 264
+ +P ++E +
Sbjct: 257 ERQPEPEPEPEQEPE 271
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 85 EIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKP 219
++ ++ + E S E G +E ESK KK+E P KK K EKP
Sbjct: 469 DVREEFESEPSSSEASGSDSEGESKKKKKE----KPEKKRKAEKP 509
>SB_40917| Best HMM Match : Filament (HMM E-Value=1.7)
Length = 421
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = +1
Query: 10 ISKILGSSKPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEP 189
I ++ SKP++ + V + K EI + VK+E+ + +V +V ESK E+ +
Sbjct: 100 IERMEKESKPQSTRVQVKVGSPK-KEISRPVKQEEQNTQVQTKVEVSESKKADEQEIGKQ 158
Query: 190 PAKKVKHEKPSIRIKPNVLEKEEKD 264
VK +P ++ + LE+E D
Sbjct: 159 SEAAVKDIEP-LKENKSYLEREIGD 182
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +1
Query: 34 KPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHE 213
+ K K+ L SRAK+ E +K + EK V +++ +++K + +E K KH+
Sbjct: 26 REKEKQLLAESRAKEEEEKKRKREVEKKK----ETVEDVKIEIEKLKAKLE-SLKNEKHQ 80
Query: 214 KPSIRIKPNVLEKEEK 261
+++K + E EEK
Sbjct: 81 M-FLQLKKVLSEDEEK 95
>SB_3675| Best HMM Match : TRAP_alpha (HMM E-Value=0)
Length = 667
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 133 GEVNEIESKVKKEEINVEPPAKKVKHEKPSI 225
GE I+ + E+ N+EPPAKK++ E +
Sbjct: 349 GEEGTIQVEDTSEKENLEPPAKKLRTEAKKV 379
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,689,333
Number of Sequences: 59808
Number of extensions: 318031
Number of successful extensions: 1260
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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