Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20871
         (822 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p pro...    29   5.8  
AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p pro...    29   5.8  
AY071554-1|AAL49176.1|  102|Drosophila melanogaster RE62456p pro...    29   5.8  
AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA...    29   5.8  
AE014296-1084|AAG22329.1|  102|Drosophila melanogaster CG18777-P...    29   5.8  

>AY094745-1|AAM11098.1|  892|Drosophila melanogaster GM03859p
           protein.
          Length = 892

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 483 KCSALSWARSYFVCLLFPLLESCR 412
           KC  L W R   VC++ P L  CR
Sbjct: 31  KCQKLDWQRHRQVCIIMPPLVECR 54


>AY071649-1|AAL49271.1|  892|Drosophila melanogaster RE70955p
           protein.
          Length = 892

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 483 KCSALSWARSYFVCLLFPLLESCR 412
           KC  L W R   VC++ P L  CR
Sbjct: 31  KCQKLDWQRHRQVCIIMPPLVECR 54


>AY071554-1|AAL49176.1|  102|Drosophila melanogaster RE62456p
           protein.
          Length = 102

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = -3

Query: 457 VIFCLFTVSVIG---ELSETVSTVIVETKPSVVEPFDGSCREEIVVTLSFTTKASVLVLF 287
           V+F LF V++     E+  + S V ++     VE  DG+ + E  V  +  T+   +   
Sbjct: 6   VLFALFAVALAALTVEVLRSDSNVGIDNYSYAVETSDGTSKSEEGVLKNAGTELEAISTH 65

Query: 286 NGFRVVPPDG 257
             F  V PDG
Sbjct: 66  GSFSYVGPDG 75


>AE014297-1777|AAF55005.1|  892|Drosophila melanogaster CG9925-PA
           protein.
          Length = 892

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 483 KCSALSWARSYFVCLLFPLLESCR 412
           KC  L W R   VC++ P L  CR
Sbjct: 31  KCQKLDWQRHRQVCIIMPPLVECR 54


>AE014296-1084|AAG22329.1|  102|Drosophila melanogaster CG18777-PA
           protein.
          Length = 102

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 457 VIFCLFTVSVIGELSETV---STVIVETKPSVVEPFDGSCREEIVVTLSFTTKASVLVLF 287
           V+F LF V++     E +   S V ++     VE  DG+ + E  V  +  T+   +   
Sbjct: 6   VLFALFAVALAAPTVEVLRSDSNVGIDNYSYAVETSDGTSKSEEGVLKNAGTELEAISTH 65

Query: 286 NGFRVVPPDG 257
             F  V PDG
Sbjct: 66  GSFSYVGPDG 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,815,981
Number of Sequences: 53049
Number of extensions: 551823
Number of successful extensions: 1343
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)