Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20870
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin... 44 2e-04
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 33 0.22
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 33 0.22
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 33 0.22
Z70310-6|CAE17904.1| 293|Caenorhabditis elegans Hypothetical pr... 29 2.7
U58732-7|AAB00597.1| 345|Caenorhabditis elegans Taf (tbp-associ... 29 3.6
AF106581-5|AAC78210.1| 588|Caenorhabditis elegans Hypothetical ... 29 4.7
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 28 6.2
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 28 6.2
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 28 6.2
AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical ... 28 6.2
AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical ... 28 8.2
>U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
a protein.
Length = 906
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +2
Query: 542 ICSYKNESKCDLSLEPEITEIFSTSQDPEELKHAWVEWHNAAGATAKKNFTDYVNLYNEA 721
IC C L + ++ IF +D L+H WV + A A +K ++ + + + NE
Sbjct: 288 ICDKDVPPPCALQ-KIDMDSIFRNEKDASRLQHLWVSYVTAI-AKSKPSYNNIITISNEG 345
Query: 722 AKLNGFDN 745
AKLNGF N
Sbjct: 346 AKLNGFAN 353
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 393 MYGW-QDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVLEWNRTTPLRRSARTRMRV 566
M+G QDF + TLR++ +K+ G L D+F AL+ TV L + R R+
Sbjct: 44 MHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALVYTVANTVDKETLEKELREAFRL 102
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 393 MYGW-QDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVLEWNRTTPLRRSARTRMRV 566
M+G QDF + TLR++ +K+ G L D+F AL+ TV L + R R+
Sbjct: 44 MHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALVYTVANTVDKETLEKELREAFRL 102
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 393 MYGW-QDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVLEWNRTTPLRRSARTRMRV 566
M+G QDF + TLR++ +K+ G L D+F AL+ TV L + R R+
Sbjct: 44 MHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALVYTVANTVDKETLEKELREAFRL 102
>Z70310-6|CAE17904.1| 293|Caenorhabditis elegans Hypothetical
protein R11A8.8 protein.
Length = 293
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 242 IWIKHRPEEEQGQLSRMGVHLEYHEGERREIDTNSPGALAS 364
+ IK RP E Q +G+ ++Y+ +R E+D +P +LAS
Sbjct: 136 VLIKVRPTPEM-QFIDLGLFVKYNNRDRLEVDYVTPNSLAS 175
>U58732-7|AAB00597.1| 345|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 11.1
protein.
Length = 345
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 315 KENEEKSIQTHLELSRQEKAAWEETKMYGWQDFQDFTLRRMFKKYS 452
+ENE ++T + LS + E + Y FQ T+RR+ +Y+
Sbjct: 227 EENELSRLKTQVLLSNFSQEQLERYESYRRSSFQKSTIRRLISQYT 272
>AF106581-5|AAC78210.1| 588|Caenorhabditis elegans Hypothetical
protein VC5.2 protein.
Length = 588
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +2
Query: 539 KICSYKNESKCDLSLEPEITEIFSTSQDPEELKHAWVEWHNAAG 670
K Y NES ++ + QD E+++H W ++H G
Sbjct: 236 KFMKYCNESLLEIIGRDNFATLEEMVQDSEQVEHIWNKYHQIIG 279
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 387 TKMYGWQDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVLEWNRTTPLRRSARTRMRV 566
T+ G QD DF SQL + A+ + Q +R VL+W R RR R R+
Sbjct: 3562 TEPAGMQDEFDFVTNMTNMMVSQLDIHAVDAPRPQGYIRIVLDWIRAI-RRRFDRLPRRI 3620
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 387 TKMYGWQDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVLEWNRTTPLRRSARTRMRV 566
T+ G QD DF SQL + A+ + Q +R VL+W R RR R R+
Sbjct: 3573 TEPAGMQDEFDFVTNMTNMMVSQLDIHAVDAPRPQGYIRIVLDWIRAI-RRRFDRLPRRI 3631
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 387 TKMYGWQDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVLEWNRTTPLRRSARTRMRV 566
T+ G QD DF SQL + A+ + Q +R VL+W R RR R R+
Sbjct: 3573 TEPAGMQDEFDFVTNMTNMMVSQLDIHAVDAPRPQGYIRIVLDWIRAI-RRRFDRLPRRI 3631
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 387 TKMYGWQDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVLEWNRTTPLRRSARTRMRV 566
T+ G QD DF SQL + A+ + Q +R VL+W R RR R R+
Sbjct: 3573 TEPAGMQDEFDFVTNMTNMMVSQLDIHAVDAPRPQGYIRIVLDWIRAI-RRRFDRLPRRI 3631
>AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical
protein M04F3.4 protein.
Length = 172
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 402 WQDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVLEW 518
W F T R M + G A+ +FQAL R + +W
Sbjct: 37 WNPFNPETCRLMIGMFDSNGDGAINFQEFQALWRYINDW 75
>AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical
protein F36F12.2 protein.
Length = 487
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 575 LSLEPEITEIFSTSQDPEELKHAWVEWHNAAGATAKKNFTDYVNLYNEAAKLNG 736
+S+EP +T FST+ +P + VE N A A TD + +Y EA G
Sbjct: 178 VSIEPWLTIKFSTTDEPYLEPNRNVELRNQAAA-----HTDCILMYKEAVSFIG 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,112,849
Number of Sequences: 27780
Number of extensions: 288123
Number of successful extensions: 951
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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