Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20869
         (810 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...   100   3e-21
BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    99   4e-21
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    99   4e-21
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    93   3e-19
BT025057-1|ABE73228.1|  481|Drosophila melanogaster IP15830p pro...    29   5.7  
BT004882-1|AAO45238.1|  481|Drosophila melanogaster GH13361p pro...    29   5.7  
AE014298-2818|AAF48935.1|  481|Drosophila melanogaster CG7874-PA...    29   5.7  

>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score =  100 bits (239), Expect = 3e-21
 Identities = 49/104 (47%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
 Frame = +1

Query: 502 EEVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNILKFLSV*SS 681
           ++++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNI+K+     +
Sbjct: 147 KKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEA 206

Query: 682 NEED*R*QHLGLYCSH-KCKQAPYQGCSKKLYDINVAKVNTLIR 810
             +     +  ++ +H +  ++  +   +KLYDI VAKVN LIR
Sbjct: 207 AMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIR 250


>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score =   99 bits (238), Expect = 4e-21
 Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = +1

Query: 502 EEVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNILKFLSV*SS 681
           ++++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNI+K+     +
Sbjct: 139 KKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEA 198

Query: 682 NEED*R*QHLGLYCSH-KCKQAPYQGCSKKLYDINVAKVNTLIR 810
             +     +  ++ +H +  +   +   +KLYDI VAKVN LIR
Sbjct: 199 AMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIR 242


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score =   99 bits (238), Expect = 4e-21
 Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = +1

Query: 502 EEVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNILKFLSV*SS 681
           ++++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNI+K+     +
Sbjct: 147 KKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEA 206

Query: 682 NEED*R*QHLGLYCSH-KCKQAPYQGCSKKLYDINVAKVNTLIR 810
             +     +  ++ +H +  +   +   +KLYDI VAKVN LIR
Sbjct: 207 AMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIR 250


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 48/104 (46%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = +1

Query: 502 EEVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNILKFLSV*SS 681
           ++++K   G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNI+K+     +
Sbjct: 140 KKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEA 198

Query: 682 NEED*R*QHLGLYCSH-KCKQAPYQGCSKKLYDINVAKVNTLIR 810
             +     +  ++ +H +  +   +   +KLYDI VAKVN LIR
Sbjct: 199 AMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIR 242


>BT025057-1|ABE73228.1|  481|Drosophila melanogaster IP15830p
           protein.
          Length = 481

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 11  QNTGTCPESSCACPEISCACPETSCACPESS 103
           + T + PE S + PE S + PE + + PE S
Sbjct: 159 EETTSAPEESSSAPEESSSAPEETTSAPEES 189



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 11  QNTGTCPESSCACPEISCACPETSCACPESS 103
           + T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210



 Score = 28.7 bits (61), Expect = 9.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 11  QNTGTCPESSCACPEISCACPETSCACPESS 103
           + + + PE S + PE + + PE S + PE S
Sbjct: 166 EESSSAPEESSSAPEETTSAPEESSSAPEES 196


>BT004882-1|AAO45238.1|  481|Drosophila melanogaster GH13361p
           protein.
          Length = 481

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 11  QNTGTCPESSCACPEISCACPETSCACPESS 103
           + T + PE S + PE S + PE + + PE S
Sbjct: 159 EETTSAPEESSSAPEESSSAPEETTSAPEES 189



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 11  QNTGTCPESSCACPEISCACPETSCACPESS 103
           + T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210



 Score = 28.7 bits (61), Expect = 9.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 11  QNTGTCPESSCACPEISCACPETSCACPESS 103
           + + + PE S + PE + + PE S + PE S
Sbjct: 166 EESSSAPEESSSAPEETTSAPEESSSAPEES 196


>AE014298-2818|AAF48935.1|  481|Drosophila melanogaster CG7874-PA
           protein.
          Length = 481

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 11  QNTGTCPESSCACPEISCACPETSCACPESS 103
           + T + PE S + PE S + PE + + PE S
Sbjct: 159 EETTSAPEESSSAPEESSSAPEETTSAPEES 189



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 11  QNTGTCPESSCACPEISCACPETSCACPESS 103
           + T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210



 Score = 28.7 bits (61), Expect = 9.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 11  QNTGTCPESSCACPEISCACPETSCACPESS 103
           + + + PE S + PE + + PE S + PE S
Sbjct: 166 EESSSAPEESSSAPEETTSAPEESSSAPEES 196


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,951,814
Number of Sequences: 53049
Number of extensions: 393344
Number of successful extensions: 1426
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)