Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20867
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 35 0.055
01_06_0366 - 28779899-28780543,28780813-28781076,28781165-287814... 34 0.13
01_06_0365 + 28767538-28767696,28768299-28768520,28768630-287688... 34 0.13
02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,499... 33 0.17
02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,498... 33 0.17
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 33 0.22
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 33 0.22
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 33 0.29
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 33 0.29
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 32 0.39
05_07_0004 + 26990250-26990516,26990877-26990931,26991286-269914... 32 0.39
04_04_0961 + 29715938-29716034,29716918-29717133,29717438-297177... 32 0.39
04_04_0118 - 22889608-22890816,22891990-22892261,22892306-228931... 32 0.51
02_02_0028 + 6196453-6196512,6196936-6197320,6197843-6197925,619... 31 0.89
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 31 1.2
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 31 1.2
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 30 1.6
03_06_0579 + 34870958-34874578 30 1.6
05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,210... 30 2.1
01_05_0735 - 24749975-24750601,24751411-24751541,24752150-247523... 30 2.1
01_05_0215 + 19374279-19374327,19374629-19374633,19376902-193769... 30 2.1
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 29 2.7
10_08_0290 + 16549048-16549262,16549770-16549833,16550106-165502... 29 3.6
03_02_0569 - 9528027-9529256,9530019-9530260,9530374-9531161,953... 29 3.6
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 29 3.6
01_07_0370 - 43119049-43120278,43121376-43121420,43121421-431216... 29 3.6
12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730 29 4.8
11_04_0359 + 16735204-16735676,16736597-16736647,16736860-167369... 29 4.8
06_03_0912 + 25896152-25896451,25896528-25897296,25897492-258976... 29 4.8
11_08_0077 - 28180918-28183269,28183553-28184608 28 6.3
11_04_0331 + 16456577-16456579,16456664-16456911,16457625-164578... 28 6.3
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426... 28 6.3
08_01_0378 + 3360215-3360253,3360326-3360437,3362176-3362213,336... 28 6.3
01_05_0703 - 24404580-24406373 28 6.3
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 28 6.3
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 28 8.3
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 28 8.3
01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 28 8.3
>02_02_0682 - 12923103-12923747,12924607-12924870,12924953-12925219,
12925301-12925529,12925614-12926295,12926409-12926682,
12926822-12927347,12927460-12927698,12927799-12927896,
12928017-12928020,12928657-12928832,12929593-12929647,
12930787-12931047
Length = 1239
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGS 172
++PS K V ++G++ +GK+T+VA L+ DP G+
Sbjct: 1020 RIPSGKTVALVGESGSGKSTVVALLERFYDPDSGA 1054
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+PS + ++G++ +GK+T+++ ++ DP+ G L
Sbjct: 352 IPSGMTMALVGESGSGKSTVISLVERFYDPQSGEVL 387
>01_06_0366 - 28779899-28780543,28780813-28781076,28781165-28781431,
28781546-28781774,28781868-28781985,28782229-28782486,
28782585-28782858,28782950-28783475,28784289-28784527,
28784626-28784847,28784912-28784914,28785124-28785299,
28786147-28786201,28786288-28786557
Length = 1181
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGS 172
+PS K + ++G++ +GK+T++A L+ DP G+
Sbjct: 963 IPSQKTIALVGESGSGKSTIIALLERFYDPDSGN 996
>01_06_0365 + 28767538-28767696,28768299-28768520,28768630-28768868,
28769499-28770024,28770115-28770388,28770495-28771134,
28771220-28771448,28771682-28771948,28772031-28772294,
28772700-28773344
Length = 1154
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGS 172
+PS K V ++G++ +GK+T++A L+ DP G+
Sbjct: 936 IPSGKTVALVGESGSGKSTVIALLERFYDPHSGT 969
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/37 (24%), Positives = 24/37 (64%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
++P+ + ++G + +GK+T+++ ++ DP+ G L
Sbjct: 280 QVPNGTTMAIVGQSGSGKSTIISLVERFYDPQDGEVL 316
>02_01_0672 -
4989053-4990432,4990523-4991410,4995896-4996436,
4996532-4997168,4997266-4997320,4997439-4997675
Length = 1245
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +2
Query: 62 NTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVR 202
N ++P+ + V ++G + +GK+T++A L+ DP G + +D+R
Sbjct: 381 NLRVPAGRTVALVGGSGSGKSTVIALLERFYDPSAGEVMVDG-VDIR 426
>02_01_0670 -
4976658-4978037,4978128-4979015,4982590-4983130,
4983209-4983845,4983962-4983992,4984094-4984324
Length = 1235
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +2
Query: 62 NTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVR 202
N ++P+ + V ++G + +GK+T++A L+ DP G + +D+R
Sbjct: 371 NLRVPAGRTVALVGGSGSGKSTVIALLERFYDPSAGEVMVDG-VDIR 416
>05_07_0003 + 26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGS 172
++PS K V ++G++ GK+T++A L+ DP G+
Sbjct: 1075 RIPSGKMVALVGESGCGKSTVIALLERFYDPDSGT 1109
>01_06_0371 + 28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+PS K V ++G++ +GK+T +A L+ +P+ G+ L
Sbjct: 1056 IPSGKTVALVGESGSGKSTAIALLERFYNPESGTIL 1091
>04_04_1331 -
32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 74 PSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
P+ K V V+G + +GK+T+VA ++ DP +G L
Sbjct: 399 PAAKTVAVVGGSGSGKSTVVALIERFYDPNEGQVL 433
>01_05_0212 +
19347142-19347444,19348853-19348907,19349117-19349292,
19350033-19350254,19350359-19350597,19351100-19351625,
19351707-19351980,19352166-19352225,19352362-19353025,
19353747-19353975,19354071-19354337,19354414-19354602,
19354771-19355415
Length = 1282
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/52 (28%), Positives = 33/52 (63%)
Frame = +2
Query: 47 VQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVR 202
V N + ++PS + + ++G++ +GK+T+++ ++ DP+ G L ID+R
Sbjct: 398 VFNGFSLQIPSGRTMALVGESGSGKSTVISLVERFYDPQSGEVL-IDGIDIR 448
>08_01_0344 +
3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+P+ K V ++G + GK+T+++ LQ DP GS L
Sbjct: 404 IPAGKVVALVGSSGCGKSTVISLLQRFYDPTSGSIL 439
>05_07_0004 + 26990250-26990516,26990877-26990931,26991286-26991461,
26991702-26991923,26992001-26992239,26992437-26992962,
26993042-26993315,26993391-26994009,26994082-26994121,
26994263-26994310,26994548-26994814,26994892-26995155,
26995260-26995904
Length = 1213
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+PS K V ++G + +GK+T +A L+ DP G L
Sbjct: 995 IPSGKTVALVGQSGSGKSTAIALLERFYDPDSGVIL 1030
>04_04_0961 + 29715938-29716034,29716918-29717133,29717438-29717776,
29718247-29719274,29719465-29719551,29719636-29720043,
29720394-29720558,29720742-29721036,29721131-29721345,
29721838-29722143,29722474-29722537,29722644-29722883,
29722959-29723062
Length = 1187
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDV-RDEYRDDHTRLSV 238
+P K V ++G +GK+TL+ L + +P++G+ +E ID+ R D RLS+
Sbjct: 968 IPGRKKVGIVGRTGSGKSTLIQALFRIVEPREGT-IEIDNIDICRIGLHDLRGRLSI 1023
>04_04_0118 -
22889608-22890816,22891990-22892261,22892306-22893131,
22893311-22893534,22893620-22893936,22894035-22894294,
22894723-22894923,22895015-22895190,22895445-22895718
Length = 1252
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 74 PSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
P+ K V+G + +GK+T+VA ++ DP +G L
Sbjct: 379 PAGKTAAVVGGSGSGKSTVVALIERFYDPNQGQVL 413
>02_02_0028 +
6196453-6196512,6196936-6197320,6197843-6197925,
6198060-6198183,6198404-6198523,6198595-6198755,
6198999-6199157,6199272-6199434,6199604-6199729,
6199775-6199900,6200400-6200764,6201204-6201404,
6201685-6201794,6201919-6202003,6202553-6202681,
6202763-6202868,6202984-6203072,6203172-6203474
Length = 964
Score = 31.1 bits (67), Expect = 0.89
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTRLSV---- 238
+P + VLG N GKTTL+ L G P G+A +D++ E + + V
Sbjct: 669 MPRGQCFGVLGPNGAGKTTLINMLTGFTKPTSGTAY-IEGMDIQFEMNKIYAGIGVCPQH 727
Query: 239 ---W-VLDGVQVTLIYSSLRSVR 295
W L G + L Y L+++R
Sbjct: 728 DLLWETLTGREHLLFYGRLKNLR 750
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2
Query: 53 NQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKK 166
NQG PS K V+V GD TGKTT V + E KK
Sbjct: 5 NQGTVDYPSFKLVIV-GDGGTGKTTFVKRHLTGEFEKK 41
>01_02_0042 -
10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +2
Query: 41 EEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
E++ + +PS V ++G + +GK+T+++ ++ DP+ G L
Sbjct: 409 EQIFRGFSLSIPSGTTVALVGQSGSGKSTVISLIERFYDPQLGDVL 454
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 77 SNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
S K V ++G++ +GK+T ++ LQ DP G L
Sbjct: 1068 SGKTVALVGESGSGKSTAISLLQRFYDPDVGHIL 1101
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 41 EEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
E++ N N + + + ++G N GK+TL+ + G+E + G L
Sbjct: 446 EKLFNNANLIVERGEKIAIIGPNGCGKSTLLKLILGMEKTQGGEVL 491
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 83 KNVLVLGDNETGKTTLVAKLQGVEDPKKGSALE 181
+ V ++G N GKTT + + G+EDP G+ ++
Sbjct: 117 EKVGLVGVNGAGKTTQLRIIAGLEDPDAGAVVK 149
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 17 DNLWSAILEEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYID 196
++ W L+ ++ +G L + NVLVLG GK+ + + G ED K SA A
Sbjct: 564 ESAWKKALQ-LEAEGTEDLEFSCNVLVLGKTGVGKSATINSIFG-EDKSKTSAFLPATTA 621
Query: 197 VRD 205
V++
Sbjct: 622 VKE 624
>05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,
2107120-2107645,2107817-2108090,2108197-2109056,
2109201-2109467,2109711-2109974,2110063-2110356,
2110455-2110814
Length = 1276
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+ S K V ++G++ +GK+T ++ LQ DP G L
Sbjct: 1055 IQSGKTVALVGESGSGKSTAISLLQRFYDPDAGHIL 1090
>01_05_0735 -
24749975-24750601,24751411-24751541,24752150-24752336,
24753801-24753898,24754182-24754689
Length = 516
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 226 SAQCLGAGW---CPGHTNLLKFALSEETFPHTLVILTVAMTTPWGILDQLQS 372
SA C+GAG PG L + SE+TF L I +A GIL ++Q+
Sbjct: 258 SAACIGAGLSKDAPGKDYTLSSSKSEQTFNAFLSISILASVYGNGILPEIQA 309
>01_05_0215 +
19374279-19374327,19374629-19374633,19376902-19376956,
19377159-19377334,19378020-19378241,19378334-19378572,
19379201-19379726,19379801-19380074,19380524-19381187,
19381604-19381832,19381924-19382190,19382308-19382496,
19382664-19383308
Length = 1179
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
++PS + ++G++ +GK+T+++ ++ DP+ G L
Sbjct: 322 QVPSGTRMALVGESGSGKSTVISLVERFYDPQSGEVL 358
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 89 VLVLGDNETGKTTLVAKLQGV--EDPKKGSALEYAYIDV 199
V++LG+N TGKTT + L G+ D +G+ +E +V
Sbjct: 376 VVMLGENGTGKTTFIRMLAGLLKPDTVEGTEIEIPEFNV 414
>10_08_0290 +
16549048-16549262,16549770-16549833,16550106-16550267,
16550786-16550956,16551041-16551235,16551421-16551546,
16551648-16551809,16551953-16552120,16552223-16552435
Length = 491
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 358 DQLQSWASVLGDHIDKLNLTPEHRLQSKKQQVQKWQRYTEPGDEMEASLLPYEEII*KL 534
D L + A++ DH+ KL EH+ + K+ Q Q+ Q+ +P D ++A + E+ KL
Sbjct: 353 DDLHTTAAL--DHLMKLQQKLEHQ-KKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKL 408
>03_02_0569 -
9528027-9529256,9530019-9530260,9530374-9531161,
9531613-9531953,9532090-9532310,9532392-9532702,
9532779-9533038,9533691-9533891,9533992-9534167,
9534242-9534296,9535739-9536146
Length = 1410
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+P+ K V ++G N +GK++++ ++ DP G L
Sbjct: 439 VPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVL 474
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 89 VLVLGDNETGKTTLVAKLQGVEDPKK 166
+++LG+N TGKTT + L G P K
Sbjct: 380 IVMLGENGTGKTTFIRMLAGRVKPDK 405
>01_07_0370 -
43119049-43120278,43121376-43121420,43121421-43121662,
43121908-43122686,43123123-43123463,43123565-43123785,
43123866-43124176,43124257-43124516,43124836-43124918,
43124940-43125036,43125132-43125305,43126215-43126592
Length = 1386
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 71 LPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 178
+P+ K V ++G N +GK++++ ++ DP G L
Sbjct: 403 VPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVL 438
>12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730
Length = 1072
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -1
Query: 440 LLCNLCSGVKFN--LSIWSPSTEAQLWSWSSIP 348
L C+L S K+ W+P QLW+W P
Sbjct: 253 LKCHLASSTKWRHPFVAWAPLHVVQLWAWERFP 285
>11_04_0359 +
16735204-16735676,16736597-16736647,16736860-16736934,
16737011-16737062,16737147-16737280,16737397-16737511,
16737665-16737751,16737855-16737903,16738351-16738435,
16738641-16738715,16738848-16739029,16739905-16739969
Length = 480
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 41 EEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYID 196
+ + N+ + L L+ G + +GKTTL+ L G+ +P G+ Y D
Sbjct: 186 QNLLNEISLNLKEKSFGLLFGRSGSGKTTLLQLLAGLSEPTHGTICIQKYND 237
>06_03_0912 + 25896152-25896451,25896528-25897296,25897492-25897658,
25898932-25901013,25901155-25901730,25904503-25905648,
25907056-25908693
Length = 2225
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 349 GILDQLQSWASVLGDHIDKLNLT 417
G DQL+ W +L H+D+L +T
Sbjct: 1200 GSRDQLRQWTELLSTHLDELTIT 1222
>11_08_0077 - 28180918-28183269,28183553-28184608
Length = 1135
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 29 SAILEEVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKK 166
SA+++ + N GNT + + V V+G GKTTL K+ E +K
Sbjct: 187 SALVQRLTN-GNTAMTTIMVVAVVGTGGIGKTTLAKKVFNDETIQK 231
>11_04_0331 + 16456577-16456579,16456664-16456911,16457625-16457812,
16458293-16458489,16458579-16458768,16458865-16459084,
16459169-16459376,16459508-16459642,16459725-16459916,
16459999-16460171,16460266-16460454,16460539-16460655,
16460734-16460818,16460900-16461052,16461135-16461260,
16461391-16461573,16461823-16461984,16462098-16462214
Length = 961
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 83 KNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTRLSVWVLD 250
K+VL + +G TT + ++ + K A EY D+R + H R + +VLD
Sbjct: 894 KDVLHFEEIVSGPTTRLTHIEVKVEDLKNKAQEYEIYDLRPFFSSAHFRDNNFVLD 949
>08_02_1554 +
27841801-27842007,27842282-27842455,27842554-27842653,
27843273-27843725,27843936-27844469,27844500-27844580,
27844690-27844781,27844890-27844963,27845071-27845293,
27845429-27845522,27845607-27845761,27845899-27846129,
27846803-27847003,27847257-27847382,27847497-27847558,
27847775-27847892,27848040-27848324,27848475-27848513
Length = 1082
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 68 KLPSNKNVLVLGDNETGKTTLV-AKLQGVEDPKKGSALEYAYID 196
KLP +VLVLG +GKT LV A + ED K+ A YID
Sbjct: 534 KLPFPGHVLVLGPRGSGKTALVRAAAKYFEDHKEILA-HVIYID 576
>08_01_0378 +
3360215-3360253,3360326-3360437,3362176-3362213,
3363949-3363966,3364629-3364847,3364937-3366727,
3367764-3367827,3367915-3367975,3368685-3368694
Length = 783
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 44 EVQNQGNT--KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALE 181
EVQN T + +N + GD K T + KLQ E +KGS E
Sbjct: 116 EVQNDKATISNMTNNSTAQMAGDAALEKLTYIQKLQRKEISEKGSCSE 163
>01_05_0703 - 24404580-24406373
Length = 597
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 74 PSNKNVLVLGDNETGKTTLVAKLQGVEDPKK 166
P + V ++G + GKTTL++ L G DP +
Sbjct: 60 PPGEVVAIVGPSGAGKTTLLSVLAGSADPAR 90
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +2
Query: 86 NVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTRLSVWVLDGVQVT 265
N+LVLG GK+T++ + G E+ K +A + A +V RL V+DG++V
Sbjct: 4915 NILVLGKIGVGKSTVINSIMG-EEKNKINAFDGATTNV---------RLVSSVVDGIKVN 4964
Query: 266 LI 271
+I
Sbjct: 4965 II 4966
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 44 EVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKL 142
EV + + N+ VL++G+ TGKTTLV L
Sbjct: 505 EVLERVACSIKFNEPVLLVGETGTGKTTLVQNL 537
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 89 VLVLGDNETGKTTLVAK-LQGVEDPKKGSALEYAYIDVRDEYRDDHTRLSVW 241
+++LGD GKT+LV + + V K+ + ++ +Y+ R LS+W
Sbjct: 17 LVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIW 68
>01_06_0556 +
30207124-30207581,30207692-30207901,30208016-30208100,
30208517-30208676,30208768-30208844,30208985-30209032,
30209504-30209594,30209703-30210004,30210214-30210495,
30210695-30211011,30211113-30211273,30211556-30211665,
30211752-30211902,30212438-30212578,30212688-30212857,
30213485-30213817,30213981-30214271,30214356-30214439,
30214620-30214753,30214946-30215173,30215273-30215444,
30215621-30215875,30215963-30216232
Length = 1509
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 80 NKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAY 190
++ L+LG +GKTTL+ L G DP ++ E Y
Sbjct: 222 SRMTLLLGPPSSGKTTLLLALAGKLDPTLETSGEVTY 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,301,936
Number of Sequences: 37544
Number of extensions: 375242
Number of successful extensions: 1084
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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