Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20863
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 29 3.4
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 29 3.4
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 29 3.4
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 29 4.5
AL031635-11|CAA21038.3| 446|Caenorhabditis elegans Hypothetical... 29 4.5
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z73426-2|CAA97794.1| 119|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 28 6.0
U23484-14|AAC46763.1| 194|Caenorhabditis elegans Hypothetical p... 28 6.0
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 28 6.0
Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 28 7.9
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 268 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 429
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 268 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 429
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Frame = +1
Query: 253 REVPDENEEIKRPLVDLRN-PGPPQHQEHE---TQNPEHHEDAE---KIVSSVKNDINTA 411
R P+E+E + +V+ P + +E +NP+ +E E K VS+++
Sbjct: 476 RRAPEEDELEQEDIVEAEQIPNELMKEVYEKFANENPDMNETPEEFYKRVSALERPAAAR 535
Query: 412 EIALRQ--GFQEVSDGIGKWYARTEQINELQASLHISKKISALRYKS*MKRYIL 567
AL+ +Q++ D I + + + E+ LH S+ +S+L RY++
Sbjct: 536 IRALKNKPDYQKIQDKINEIVQKHKNAAEIDKELHSSEILSSLTITEVDVRYMI 589
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Frame = +1
Query: 253 REVPDENEEIKRPLVDLRN-PGPPQHQEHE---TQNPEHHEDAE---KIVSSVKNDINTA 411
R P+E+E + +V+ P + +E +NP+ +E E K VS+++
Sbjct: 476 RRAPEEDELEQEDIVEAEQIPNELMKEVYEKFANENPDMNETPEEFYKRVSALERPAAAR 535
Query: 412 EIALRQ--GFQEVSDGIGKWYARTEQINELQASLHISKKISALRYKS*MKRYIL 567
AL+ +Q++ D I + + + E+ LH S+ +S+L RY++
Sbjct: 536 IRALKNKPDYQKIQDKINEIVQKHKNAAEIDKELHSSEILSSLTITEVDVRYMI 589
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical protein
ZK662.4 protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/78 (21%), Positives = 33/78 (42%)
Frame = +1
Query: 220 NQTVVEE*FRKREVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKND 399
N V++ +RKRE+ +E+ + P P +N E + + N
Sbjct: 1287 NAPVIKRTYRKRELSNEDGPLNLVTPPAHTPNPRGRPRKYPKNSVTPEAEKSLTDYDYNP 1346
Query: 400 INTAEIALRQGFQEVSDG 453
+ AL++G+ ++ DG
Sbjct: 1347 GTSQRRALKKGYVQLEDG 1364
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical protein
ZK662.4 protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/78 (21%), Positives = 33/78 (42%)
Frame = +1
Query: 220 NQTVVEE*FRKREVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKND 399
N V++ +RKRE+ +E+ + P P +N E + + N
Sbjct: 1287 NAPVIKRTYRKRELSNEDGPLNLVTPPAHTPNPRGRPRKYPKNSVTPEAEKSLTDYDYNP 1346
Query: 400 INTAEIALRQGFQEVSDG 453
+ AL++G+ ++ DG
Sbjct: 1347 GTSQRRALKKGYVQLEDG 1364
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/78 (21%), Positives = 33/78 (42%)
Frame = +1
Query: 220 NQTVVEE*FRKREVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKND 399
N V++ +RKRE+ +E+ + P P +N E + + N
Sbjct: 1287 NAPVIKRTYRKRELSNEDGPLNLVTPPAHTPNPRGRPRKYPKNSVTPEAEKSLTDYDYNP 1346
Query: 400 INTAEIALRQGFQEVSDG 453
+ AL++G+ ++ DG
Sbjct: 1347 GTSQRRALKKGYVQLEDG 1364
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/78 (21%), Positives = 33/78 (42%)
Frame = +1
Query: 220 NQTVVEE*FRKREVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKND 399
N V++ +RKRE+ +E+ + P P +N E + + N
Sbjct: 1287 NAPVIKRTYRKRELSNEDGPLNLVTPPAHTPNPRGRPRKYPKNSVTPEAEKSLTDYDYNP 1346
Query: 400 INTAEIALRQGFQEVSDG 453
+ AL++G+ ++ DG
Sbjct: 1347 GTSQRRALKKGYVQLEDG 1364
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/78 (21%), Positives = 33/78 (42%)
Frame = +1
Query: 220 NQTVVEE*FRKREVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKND 399
N V++ +RKRE+ +E+ + P P +N E + + N
Sbjct: 1287 NAPVIKRTYRKRELSNEDGPLNLVTPPAHTPNPRGRPRKYPKNSVTPEAEKSLTDYDYNP 1346
Query: 400 INTAEIALRQGFQEVSDG 453
+ AL++G+ ++ DG
Sbjct: 1347 GTSQRRALKKGYVQLEDG 1364
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -2
Query: 279 FLIFIRHFTFSKSLFNDGLISSTITLT--GMSMTSFLFARRLLSMSLMVLAWSMCSCSL 109
FL ++ F K++ L+ ITLT G +T FL +R++ +L S CSL
Sbjct: 25 FLCYLAIFQSPKAIRTYSLVLINITLTNVGACVTGFLLDQRIIQSGKSMLYVSYGYCSL 83
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -2
Query: 258 FTFSKSLFNDGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMCSCSLDKLSTTFKGL 79
F K LF + + + L+ ++T+ + LL S L + + + STT GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316
Query: 78 SSASGTLSG 52
+ SGT++G
Sbjct: 317 AYVSGTITG 325
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -2
Query: 258 FTFSKSLFNDGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMCSCSLDKLSTTFKGL 79
F K LF + + + L+ ++T+ + LL S L + + + STT GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316
Query: 78 SSASGTLSG 52
+ SGT++G
Sbjct: 317 AYVSGTITG 325
>AL031635-11|CAA21038.3| 446|Caenorhabditis elegans Hypothetical
protein Y47D3B.3 protein.
Length = 446
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -2
Query: 288 PLDFLIFIRHFTFSKSLFNDGLISSTITLTGMSMTSFLF 172
P F I + F FS LFN IS TL+ +S SF F
Sbjct: 50 PATFAIIVSFFNFSLLLFNHTYISHYATLS-LSSFSFFF 87
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 313 GPPQHQEHETQNPEHHEDAEKIVSSVKN 396
GPP HQ+H Q +H+ A SS N
Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN 160
>Z73426-2|CAA97794.1| 119|Caenorhabditis elegans Hypothetical
protein F40F11.3 protein.
Length = 119
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 68 EAEDKPLNVVDNLSSEQ-EHIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSD 244
E E K D L + EH+ + + I+N + E+I + EEI+ +K
Sbjct: 16 EMELKKGGTFDKLRKQAIEHVKDSKLVHRIENEMLVKVDEIIASSANLTQEEIQRKMKDF 75
Query: 245 L-ENVKCR 265
+ EN K R
Sbjct: 76 MNENAKMR 83
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 268 ENEEIKRPLVDLRNPGPPQHQEHETQNPE 354
EN+ + V+ + P P QHQ+ + Q PE
Sbjct: 404 ENQRYEGNFVEYQPPPPQQHQQQQPQAPE 432
>U23484-14|AAC46763.1| 194|Caenorhabditis elegans Hypothetical
protein EEED8.3 protein.
Length = 194
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/112 (19%), Positives = 53/112 (47%)
Frame = +2
Query: 56 DKVPEAEDKPLNVVDNLSSEQEHIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSL 235
+ V E + + + DN + Q + NT+K++ ++ +N+K+ + P++++ I
Sbjct: 17 EMVEEEKFEKIENTDNSENFQYVSTKGNTVKEV--NINSNEKKKKEAPIQILTAMIGKWK 74
Query: 236 KSDLENVKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLKKSFLPS 391
+ EN++ + K + + G K +++ T +L KS +P+
Sbjct: 75 LASSENLQEYFTLEKFPEITQMAWEHGITCYKMNGNQLHVHTDLLGKSLIPT 126
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 585 IAAPSVEETQNKASFETIESGLKSLETNFNSGLNQLSEG 701
+ PS + T+NK I+ + L +NFN+G+ +S G
Sbjct: 215 VVLPSRKSTRNKKDMNQIKED-EELVSNFNNGIGVISRG 252
>Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical
protein C50B6.2 protein.
Length = 582
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +2
Query: 44 ASIPDKVPEA----EDKPLNVVDN-LSSEQEHIDQANTIKDIDNSLRANKKE 184
A I KV EA ++P V D + +EQ+ ++ + KD++NS N++E
Sbjct: 234 AEIKQKVEEALGVASEEPETVADEAVKTEQKEAEEDSVEKDVENSDEQNQEE 285
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/101 (21%), Positives = 42/101 (41%)
Frame = +2
Query: 35 ARAASIPDKVPEAEDKPLNVVDNLSSEQEHIDQANTIKDIDNSLRANKKEVIDIPVKVIV 214
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 215 EEIKPSLKSDLENVKCRMKMRKSRGL*SI*EIPGPRSIKST 337
E P+ ++ +N K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/101 (21%), Positives = 42/101 (41%)
Frame = +2
Query: 35 ARAASIPDKVPEAEDKPLNVVDNLSSEQEHIDQANTIKDIDNSLRANKKEVIDIPVKVIV 214
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 215 EEIKPSLKSDLENVKCRMKMRKSRGL*SI*EIPGPRSIKST 337
E P+ ++ +N K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/101 (21%), Positives = 42/101 (41%)
Frame = +2
Query: 35 ARAASIPDKVPEAEDKPLNVVDNLSSEQEHIDQANTIKDIDNSLRANKKEVIDIPVKVIV 214
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 215 EEIKPSLKSDLENVKCRMKMRKSRGL*SI*EIPGPRSIKST 337
E P+ ++ +N K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/101 (21%), Positives = 42/101 (41%)
Frame = +2
Query: 35 ARAASIPDKVPEAEDKPLNVVDNLSSEQEHIDQANTIKDIDNSLRANKKEVIDIPVKVIV 214
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 215 EEIKPSLKSDLENVKCRMKMRKSRGL*SI*EIPGPRSIKST 337
E P+ ++ +N K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/101 (21%), Positives = 42/101 (41%)
Frame = +2
Query: 35 ARAASIPDKVPEAEDKPLNVVDNLSSEQEHIDQANTIKDIDNSLRANKKEVIDIPVKVIV 214
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 215 EEIKPSLKSDLENVKCRMKMRKSRGL*SI*EIPGPRSIKST 337
E P+ ++ +N K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/101 (21%), Positives = 42/101 (41%)
Frame = +2
Query: 35 ARAASIPDKVPEAEDKPLNVVDNLSSEQEHIDQANTIKDIDNSLRANKKEVIDIPVKVIV 214
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 215 EEIKPSLKSDLENVKCRMKMRKSRGL*SI*EIPGPRSIKST 337
E P+ ++ +N K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/101 (21%), Positives = 42/101 (41%)
Frame = +2
Query: 35 ARAASIPDKVPEAEDKPLNVVDNLSSEQEHIDQANTIKDIDNSLRANKKEVIDIPVKVIV 214
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 215 EEIKPSLKSDLENVKCRMKMRKSRGL*SI*EIPGPRSIKST 337
E P+ ++ +N K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/101 (21%), Positives = 42/101 (41%)
Frame = +2
Query: 35 ARAASIPDKVPEAEDKPLNVVDNLSSEQEHIDQANTIKDIDNSLRANKKEVIDIPVKVIV 214
+ A + P V + ++P VV +Q + K+ S N + PV+ +V
Sbjct: 225 SEATAAPASVEQVVEQP-KVVTEEPHQQAAPQEKKNKKNKRKSESENVPAASETPVEPVV 283
Query: 215 EEIKPSLKSDLENVKCRMKMRKSRGL*SI*EIPGPRSIKST 337
E P+ ++ +N K + K + + + P+S K T
Sbjct: 284 ETTPPASENQKKNKKDKKKSESEKVVEEPVQAEAPKSKKPT 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,079,844
Number of Sequences: 27780
Number of extensions: 306637
Number of successful extensions: 1391
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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