Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20862
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    30   0.062
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    24   4.1  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    24   4.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 30.3 bits (65), Expect = 0.062
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 493 DKTGGQPLVKEEKKLIDSDPVVLPPRNSPSPESKPSPGIDNNVT 624
           D +GG+P +   K  I+ +P    PR   SP   PSPG   +++
Sbjct: 421 DSSGGRPPLHALKDFINKEP----PRPGQSPTQSPSPGSQQSLS 460


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 716 GSVVGIVTSSFLLSRNCDWEG 654
           G V+ IVT  FLLSR+ + EG
Sbjct: 19  GVVIFIVTPRFLLSRHKNLEG 39


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 588 IKTFTWY*QQCYMSESVCYSKNTFP 662
           ++TF     +C   E VC  KN FP
Sbjct: 101 VRTFRLRSNRCPAYEEVCCPKNAFP 125


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 559 LPPRNSPSPESKPSPGI 609
           +PP ++ SP S PSP +
Sbjct: 868 MPPSSNSSPSSYPSPDV 884


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,572
Number of Sequences: 2352
Number of extensions: 11677
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)