Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20862
(718 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095510-1|AAM12244.1| 1050|Drosophila melanogaster AT12601p pro... 31 2.1
AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA... 31 2.1
BT021454-1|AAX33602.1| 732|Drosophila melanogaster AT23475p pro... 30 2.7
AE013599-1681|AAF58394.2| 732|Drosophila melanogaster CG4714-PA... 30 2.7
BT001614-1|AAN71369.1| 867|Drosophila melanogaster RE33889p pro... 29 4.8
AY058764-1|AAL13993.1| 401|Drosophila melanogaster SD03374p pro... 29 4.8
AE013599-3901|AAF47228.1| 867|Drosophila melanogaster CG11414-P... 29 4.8
AJ252125-1|CAB64387.1| 470|Drosophila melanogaster Sox14 protei... 29 6.3
AE013599-3763|AAF47126.2| 669|Drosophila melanogaster CG3090-PB... 29 6.3
AE013599-3762|AAM68286.1| 669|Drosophila melanogaster CG3090-PA... 29 6.3
M62472-1|AAA62769.1| 679|Drosophila melanogaster recombination ... 29 8.4
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 29 8.4
AY118605-1|AAM49974.1| 679|Drosophila melanogaster LP05366p pro... 29 8.4
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 29 8.4
AF073994-2|AAC27621.1| 679|Drosophila melanogaster recombinatio... 29 8.4
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 29 8.4
AE014134-522|AAF51175.1| 679|Drosophila melanogaster CG3178-PA ... 29 8.4
>AY095510-1|AAM12244.1| 1050|Drosophila melanogaster AT12601p
protein.
Length = 1050
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 563 LREIAHLQNQNLHLVLTTMLHVRKCLLFKEHLPSRSFVITK 685
L+EI LQNQN+ T +LH R+ K +L S ITK
Sbjct: 160 LKEIETLQNQNIAQSKTIVLHERELQTIKANLVQLSQDITK 200
>AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA
protein.
Length = 1978
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 563 LREIAHLQNQNLHLVLTTMLHVRKCLLFKEHLPSRSFVITK 685
L+EI LQNQN+ T +LH R+ K +L S ITK
Sbjct: 160 LKEIETLQNQNIAQSKTIVLHERELQTIKANLVQLSQDITK 200
>BT021454-1|AAX33602.1| 732|Drosophila melanogaster AT23475p
protein.
Length = 732
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 526 EKKLIDSDPVVLPPRNSPSPE--SKPSPG 606
EK +D+ PVV+PP ++ PE SKP G
Sbjct: 22 EKSEVDTVPVVVPPESTAEPEVISKPEEG 50
>AE013599-1681|AAF58394.2| 732|Drosophila melanogaster CG4714-PA
protein.
Length = 732
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 526 EKKLIDSDPVVLPPRNSPSPE--SKPSPG 606
EK +D+ PVV+PP ++ PE SKP G
Sbjct: 22 EKSEVDTVPVVVPPESTAEPEVISKPEEG 50
>BT001614-1|AAN71369.1| 867|Drosophila melanogaster RE33889p
protein.
Length = 867
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 544 SDPVVLPPRNSPSPESKPSPGIDNNVTCQKVSVIQRTPSQSQFRDNKKEDVTI 702
S P+ PP P KP PG +NVT V+ + + P+ F ++ E I
Sbjct: 669 STPIRAPPGLKPGGPLKPPPGFVSNVT---VNSVAKLPNNLTFTNSLGESYDI 718
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 520 KEEKKLIDSDPVVLPPRNSPSPESKPSPGIDNNVTCQKVSVIQRTPSQSQFRDNKK 687
K++++L + V P PSP SKP+P NN Q+ ++ Q + N++
Sbjct: 591 KKQRELENRKAKVAPAPVLPSPTSKPAPKASNN-NVQEQQANKKDKKQKDKKSNQE 645
>AY058764-1|AAL13993.1| 401|Drosophila melanogaster SD03374p
protein.
Length = 401
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 544 SDPVVLPPRNSPSPESKPSPGIDNNVTCQKVSVIQRTPSQSQFRDNKKEDVTI 702
S P+ PP P KP PG +NVT V+ + P+ F ++ E I
Sbjct: 219 STPIRAPPGLKPGGPLKPPPGFVSNVTANSVA---KLPNNLTFTNSLGESYDI 268
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 520 KEEKKLIDSDPVVLPPRNSPSPESKPSPGIDNNVTCQKVSVIQRTPSQSQFRDNKK 687
K++++L + V P PSP SKP+P NN Q+ ++ Q + N++
Sbjct: 141 KKQRELENRKAKVAPAPVLPSPTSKPAPKASNN-NVQEQQANKKDKKQKDKKSNQE 195
>AE013599-3901|AAF47228.1| 867|Drosophila melanogaster CG11414-PA
protein.
Length = 867
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 544 SDPVVLPPRNSPSPESKPSPGIDNNVTCQKVSVIQRTPSQSQFRDNKKEDVTI 702
S P+ PP P KP PG +NVT V+ + + P+ F ++ E I
Sbjct: 669 STPIRAPPGLKPGGPLKPPPGFVSNVT---VNSVAKLPNNLTFTNSLGESYDI 718
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 520 KEEKKLIDSDPVVLPPRNSPSPESKPSPGIDNNVTCQKVSVIQRTPSQSQFRDNKK 687
K++++L + V P PSP SKP+P NN Q+ ++ Q + N++
Sbjct: 591 KKQRELENRKAKVAPAPVLPSPTSKPAPKASNN-NVQEQQANKKDKKQKDKKSNQE 645
>AJ252125-1|CAB64387.1| 470|Drosophila melanogaster Sox14 protein
protein.
Length = 470
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 541 DSDPVVLPPRN-SPSPESKPSPGIDNNVTCQK 633
DS P LPP + SPSP S PSP QK
Sbjct: 47 DSTPHTLPPFSPSPSPASSPSPAPAQTPGAQK 78
>AE013599-3763|AAF47126.2| 669|Drosophila melanogaster CG3090-PB,
isoform B protein.
Length = 669
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 541 DSDPVVLPPRN-SPSPESKPSPGIDNNVTCQK 633
DS P LPP + SPSP S PSP QK
Sbjct: 47 DSTPHTLPPFSPSPSPASSPSPAPAQTPGAQK 78
>AE013599-3762|AAM68286.1| 669|Drosophila melanogaster CG3090-PA,
isoform A protein.
Length = 669
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 541 DSDPVVLPPRN-SPSPESKPSPGIDNNVTCQK 633
DS P LPP + SPSP S PSP QK
Sbjct: 47 DSTPHTLPPFSPSPSPASSPSPAPAQTPGAQK 78
>M62472-1|AAA62769.1| 679|Drosophila melanogaster recombination
repair protein protein.
Length = 679
Score = 28.7 bits (61), Expect = 8.4
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 487 RGDKTGGQPLV-KEEKKLIDSDPVVLPPRNSPSPESKPSPGIDN-NVTCQKVSVIQRTPS 660
R K G +P K++KK D + V+ PS E+KP+ G V + V I+
Sbjct: 310 RAKKEGKEPAPGKKQKKSADKENGVVEEEAKPSTETKPAKGRKKAPVKAEDVEDIEEAAE 369
Query: 661 QSQ-FRDNKK 687
+S+ R KK
Sbjct: 370 ESKPARGRKK 379
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 514 LVKEEKKLIDSDPVVLPPRNSPSPESKPSPGIDNNVTCQKVSVIQRTP 657
L K K L+ + V PP + PSP PSP ++V K + + TP
Sbjct: 293 LPKALKALLHTQEPVAPP-SRPSPVGPPSPAPTSSVIVAKETPVPVTP 339
>AY118605-1|AAM49974.1| 679|Drosophila melanogaster LP05366p
protein.
Length = 679
Score = 28.7 bits (61), Expect = 8.4
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 487 RGDKTGGQPLV-KEEKKLIDSDPVVLPPRNSPSPESKPSPGIDN-NVTCQKVSVIQRTPS 660
R K G +P K++KK D + V+ PS E+KP+ G V + V I+
Sbjct: 310 RAKKEGKEPAPGKKQKKSADKENGVVEEEAKPSTETKPAKGRKKAPVKAEDVEDIEEAAE 369
Query: 661 QSQ-FRDNKK 687
+S+ R KK
Sbjct: 370 ESKPARGRKK 379
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 514 LVKEEKKLIDSDPVVLPPRNSPSPESKPSPGIDNNVTCQKVSVIQRTP 657
L K K L+ + V PP + PSP PSP ++V K + + TP
Sbjct: 293 LPKALKALLHTQEPVAPP-SRPSPVGPPSPAPTSSVIVAKETPVPVTP 339
>AF073994-2|AAC27621.1| 679|Drosophila melanogaster recombination
repair protein 1 protein.
Length = 679
Score = 28.7 bits (61), Expect = 8.4
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 487 RGDKTGGQPLV-KEEKKLIDSDPVVLPPRNSPSPESKPSPGIDN-NVTCQKVSVIQRTPS 660
R K G +P K++KK D + V+ PS E+KP+ G V + V I+
Sbjct: 310 RAKKEGKEPAPGKKQKKSADKENGVVEEEAKPSTETKPAKGRKKAPVKAEDVEDIEEAAE 369
Query: 661 QSQ-FRDNKK 687
+S+ R KK
Sbjct: 370 ESKPARGRKK 379
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 514 LVKEEKKLIDSDPVVLPPRNSPSPESKPSPGIDNNVTCQKVSVIQRTP 657
L K K L+ + V PP + PSP PSP ++V K + + TP
Sbjct: 293 LPKALKALLHTQEPVAPP-SRPSPVGPPSPAPTSSVIVAKETPVPVTP 339
>AE014134-522|AAF51175.1| 679|Drosophila melanogaster CG3178-PA
protein.
Length = 679
Score = 28.7 bits (61), Expect = 8.4
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 487 RGDKTGGQPLV-KEEKKLIDSDPVVLPPRNSPSPESKPSPGIDN-NVTCQKVSVIQRTPS 660
R K G +P K++KK D + V+ PS E+KP+ G V + V I+
Sbjct: 310 RAKKEGKEPAPGKKQKKSADKENGVVEEEAKPSTETKPAKGRKKAPVKAEDVEDIEEAAE 369
Query: 661 QSQ-FRDNKK 687
+S+ R KK
Sbjct: 370 ESKPARGRKK 379
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,145,633
Number of Sequences: 53049
Number of extensions: 532013
Number of successful extensions: 2210
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2201
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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