Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20860
(685 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 137 2e-31
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 136 5e-31
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 128 9e-29
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 103 5e-21
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 98 2e-19
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 97 4e-19
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 83 5e-15
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 79 1e-13
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 78 2e-13
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 74 3e-12
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 72 2e-11
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 68 2e-10
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 67 3e-10
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 65 2e-09
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 64 2e-09
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 64 4e-09
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 64 4e-09
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 62 9e-09
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 62 1e-08
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 62 2e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 59 9e-08
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 58 2e-07
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 2e-06
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 53 6e-06
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 52 2e-05
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 49 9e-05
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 48 3e-04
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 3e-04
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 47 4e-04
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 47 4e-04
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 42 0.011
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 42 0.014
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 41 0.032
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 40 0.056
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 38 0.17
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 37 0.40
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 36 0.70
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 36 0.92
UniRef50_UPI0000E48534 Cluster: PREDICTED: similar to ankyrin 2,... 36 1.2
UniRef50_A4CNC1 Cluster: Putative uncharacterized protein; n=2; ... 35 1.6
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 35 1.6
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 35 1.6
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 35 2.1
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 34 2.8
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 34 2.8
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 4.9
UniRef50_A4T4R5 Cluster: Putative outer membrane adhesin like pr... 33 4.9
UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3; ... 33 6.5
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 33 6.5
UniRef50_Q4SUE4 Cluster: Chromosome undetermined SCAF13964, whol... 33 8.6
UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein ... 33 8.6
UniRef50_Q012Y6 Cluster: Chromosome 08 contig 1, DNA sequence; n... 33 8.6
UniRef50_A0MF19 Cluster: Putative uncharacterized protein; n=2; ... 33 8.6
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 33 8.6
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 137 bits (332), Expect = 2e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-25
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 3e-15
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 136 bits (329), Expect = 5e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALE+LLPHI+GNVGFVFT+ DL EVRD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 115 bits (276), Expect = 1e-24
Identities = 52/66 (78%), Positives = 60/66 (90%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 85.8 bits (203), Expect = 9e-16
Identities = 37/55 (67%), Positives = 51/55 (92%), Gaps = 3/55 (5%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEA---NLLNMLNISPFSYGLVVKQVYDSGTIFA 661
+GTIEI++DV ++KPGDKVGASEA N+LNMLNISPFSYGL+++QVYD+G++++
Sbjct: 149 RGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYS 203
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 128 bits (310), Expect = 9e-29
Identities = 58/94 (61%), Positives = 75/94 (79%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+ NP LEK+LPH+KGN+GFVFT D+V++R+ +L N+V APA+ GA
Sbjct: 56 GKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP+ V +PA NTGLGPEKTSFFQALSI TKIS+
Sbjct: 116 IAPVDVFVPASNTGLGPEKTSFFQALSIATKISR 149
Score = 94.3 bits (224), Expect = 2e-18
Identities = 41/66 (62%), Positives = 52/66 (78%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLR + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 244 MRKAXK 261
+RKA +
Sbjct: 61 IRKALR 66
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/52 (65%), Positives = 45/52 (86%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFA 661
+GTIEI+++VH++K G+KVGASEA LL ML I PF+YGL + QVYDSG++FA
Sbjct: 149 RGTIEILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFA 200
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 103 bits (246), Expect = 5e-21
Identities = 47/94 (50%), Positives = 67/94 (71%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ K+ + P LE+LLPHIKGNVGF+FT+GDL +++ KL K +PA+ G
Sbjct: 63 GKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGV 122
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V++PA +TGL P +T+F QAL+I +KI+K
Sbjct: 123 IAPNDVIVPAGDTGLDPTQTNFVQALNIASKITK 156
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LR + +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 244 MRKAXKTTWTTIQP 285
+RKA K T QP
Sbjct: 68 IRKAIKNQAET-QP 80
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFALK 667
KG IEI ++ ++K G+KVG S+A LL L I+PF YG V+ VYD+G ++ K
Sbjct: 156 KGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAK 209
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 98.3 bits (234), Expect = 2e-19
Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARP 401
GK +S + H +N N A+ LLP ++GNVG +FT+GDL EV +++ KV APAR
Sbjct: 56 GKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 115
Query: 402 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+K
Sbjct: 116 GLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINK 151
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/52 (63%), Positives = 42/52 (80%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFA 661
KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F+
Sbjct: 151 KGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFS 202
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LR S VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 244 MRKAXK 261
M+++ +
Sbjct: 61 MKRSVR 66
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 97.1 bits (231), Expect = 4e-19
Identities = 49/96 (51%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARP 401
GK +S + H D N A LLP ++GNVG +FT+GDL EV +++ KV APAR
Sbjct: 57 GKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 116
Query: 402 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+K
Sbjct: 117 GLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVF 202
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +1
Query: 79 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRKAX 258
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LR S VLMGKNTMM+++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 259 K 261
+
Sbjct: 67 R 67
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 83.4 bits (197), Expect = 5e-15
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQA-PARPG 404
GK + K +L P +EKLLP +K N+GFVF + DL E+R+ +L NK + PAR G
Sbjct: 56 GKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLG 115
Query: 405 AIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP+ V IP TG+ P TSF ++L I TKI K
Sbjct: 116 VIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVK 150
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/66 (45%), Positives = 38/66 (57%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLR + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 244 MRKAXK 261
+R A K
Sbjct: 61 IRTALK 66
Score = 56.0 bits (129), Expect = 8e-07
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFALK 667
KG IEI VH++K G+KV AS A LL N++P SYG+ V+ VYD G I+ K
Sbjct: 150 KGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAK 202
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 79.0 bits (186), Expect = 1e-13
Identities = 46/99 (46%), Positives = 61/99 (61%)
Frame = +3
Query: 213 QXRAHGKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAP 392
+ RA KK S D L N +EK L + GN +FT ++ + L ++VQAP
Sbjct: 64 ERRAEDKK----ASAYDKLLYNTCIEKKL--LCGNTALIFTNEEIPVITAVLDKHRVQAP 117
Query: 393 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
AR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI+K
Sbjct: 118 ARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAK 156
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
KGT+EI++D +L GD+V S A LL L+ISPF Y + V+ V+D G +F
Sbjct: 156 KGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLF 206
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 91 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRK 252
K Y + L +Y + DNV SQQ+ +R LR ++MGK T+ +K
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKK 61
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/83 (44%), Positives = 57/83 (68%)
Frame = +3
Query: 279 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGP 458
P +E L+ +KGN+G +FT DL +++D + + +APAR G++A V I A TGL P
Sbjct: 91 PHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDP 150
Query: 459 EKTSFFQALSIPTKISKVLLKSS 527
++T+FFQ L+IPTKI+K ++ S
Sbjct: 151 KQTAFFQNLAIPTKIAKAQIEIS 173
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +2
Query: 491 PYQNFKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
P + K IEI D I+ G+KVG++EA LL LNI+PFSY L V V+D+G ++
Sbjct: 162 PTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNVY 217
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-XSSXVLMGKNT 240
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S +LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 241 MMRKA 255
+++ A
Sbjct: 61 LIKAA 65
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/75 (46%), Positives = 47/75 (62%)
Frame = +3
Query: 285 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGPEK 464
L+ L + G VGF+FT + +++ + NKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 93 LDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPAS 152
Query: 465 TSFFQALSIPTKISK 509
FF AL IPTKI K
Sbjct: 153 IQFFHALQIPTKIEK 167
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQI-RISLRXSSXVLMGKNT 240
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q I RI + ++ +++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 241 MMRKAXKT 264
+ +K T
Sbjct: 61 LFKKVLAT 68
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTI 655
KG I+I D +LK G KVG S+A LL L PF YG+ V YD+G+I
Sbjct: 167 KGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSI 216
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/94 (38%), Positives = 55/94 (58%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GKK + +D D+ P L+ L ++K N +F + ++ EV+ + +V APA+ G
Sbjct: 55 GKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGV 114
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
AP V+IPA TG+ P +TSF Q L I TKI++
Sbjct: 115 FAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINR 148
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFA 661
+G I+I+N+VHI+K G KVGASEA LL LNI PF+YGL K +YD+G ++
Sbjct: 148 RGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYS 199
Score = 49.6 bits (113), Expect = 7e-05
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +1
Query: 91 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRKAXK 261
K + K +L Y K + AD VGS Q+Q+IR S+R VLMGK TM+RK +
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIR 65
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/89 (41%), Positives = 51/89 (57%)
Frame = +3
Query: 243 DAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLS 422
D + K+ P LE L+P ++GNV +F ++ EV + +KV A A+ G IAP
Sbjct: 71 DFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPND 130
Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISK 509
V + TG+ P +TSFFQAL I TKI K
Sbjct: 131 VHVYPGPTGMDPSQTSFFQALGIFTKIVK 159
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/52 (50%), Positives = 39/52 (75%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFA 661
KG I+I+N++H++ KVG SEA LL L + PFS+GL VK VYD+G++++
Sbjct: 159 KGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSFGLKVKNVYDNGSVYS 210
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +1
Query: 91 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRKAXK 261
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R K
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLK 59
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/77 (41%), Positives = 45/77 (58%)
Frame = +3
Query: 279 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGP 458
P L L+PH+K + +VF + ++ K+ V APAR G +A V+IP TG+ P
Sbjct: 91 PQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDP 150
Query: 459 EKTSFFQALSIPTKISK 509
+ +FF ALSI TKI K
Sbjct: 151 SQINFFHALSISTKIQK 167
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTI 655
KG IEI +V + G K+G SE +LL +NI PFSYG+ YD+G I
Sbjct: 167 KGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEI 216
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +1
Query: 76 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRKA 255
DK K + + +LL +Y + +NVGS Q+QQIR SL ++ +++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 65.3 bits (152), Expect = 1e-09
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +3
Query: 276 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLG 455
NP L+P + GNVG +FT+GDL EV +++ KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXLN 74
Query: 456 PEKTSFFQALSIPTKISKVLLKSSTMYTS*SPVTRLEL-LKPTFSTC*TSLHSHMVLLLS 632
T PT S+V +K + Y P+ + L P + C T V LL
Sbjct: 75 LAHTRASXKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
Query: 633 R 635
R
Sbjct: 131 R 131
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = +3
Query: 261 DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAH 440
+ LD++ L+ LLP+IK NV FVFT GD + K +A A+ G +AP VVI
Sbjct: 69 NQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEPM 127
Query: 441 NTGLGPEKTSFFQALSIPTKISK 509
T GP++ F+ AL I TKI+K
Sbjct: 128 LTQSGPDQHGFYAALGIDTKINK 150
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
KG IEI+N V+++K GD V S A LL L I PF Y + +YD G I+
Sbjct: 150 KGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIY 200
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +1
Query: 79 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRK 252
K + Y K+ + L EY K +V DNV S Q+ QIR LR + +L GKNT++++
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKR 66
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3
Query: 249 QSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKV 383
Q+ + HL+ N L KLLPHIK VGFVFT+GDLVEVRDKL+ +KV
Sbjct: 693 QAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 37.1 bits (82), Expect = 0.40
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +2
Query: 491 PYQNFKGTIEIINDVHILKPGDKVGASEANLL--NMLNISP 607
P + KGTIEIINDV ILK GDK+ ++ ++L+I P
Sbjct: 742 PIKISKGTIEIINDVPILKSGDKIEQVYGSIFSPDILDIKP 782
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
KG +EII+ +L GDKVG S+ANLL MLNI PF Y + + Q+Y+ G I+
Sbjct: 171 KGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIY 221
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/77 (38%), Positives = 48/77 (62%)
Frame = +3
Query: 279 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGP 458
P L + +KG+V FVF +G+ +++ + N +A A+ G +A V + + TG+ P
Sbjct: 95 PELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTP 154
Query: 459 EKTSFFQALSIPTKISK 509
+KTS+FQAL I TKI+K
Sbjct: 155 DKTSYFQALGIATKITK 171
Score = 35.9 bits (79), Expect = 0.92
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M R+D K + + +L + Y + +V +NV S Q++ I+ ++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 244 MRKA 255
+R+A
Sbjct: 85 IRRA 88
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 63.7 bits (148), Expect = 4e-09
Identities = 38/92 (41%), Positives = 45/92 (48%)
Frame = -1
Query: 502 ILVGMERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWXXXXXXXXXXXXXSPRVNTK 323
ILVG +AWKKEV G PVL A +GA AP AGA V TK
Sbjct: 6 ILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLVKTK 65
Query: 322 PTLPLMCGNSFSRAGLLSRWSLXLCAS*CFFP 227
PTLPL GN+FS++G + L + F P
Sbjct: 66 PTLPLTKGNNFSKSGKSDKKPLMALLTMVFLP 97
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 62.5 bits (145), Expect = 9e-09
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +3
Query: 276 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLG 455
NP L+P + GNVG +FT+GDL E +++ KV APA G +A + V++P NTGL
Sbjct: 56 NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGLN 115
Query: 456 PEKTSFFQALSIPTKISKVLLKSSTMYTS*SPVTRLEL-LKPTFSTC*TSLHSHMVLLL 629
T PT S+V +K + Y P+ + L P + C T V LL
Sbjct: 116 LAHTRASIKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALL 170
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 503 FKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
FKGTIEI + ++ G KVGASEAN+LN+L I PF Y L ++ +YD G ++
Sbjct: 150 FKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMY 201
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +3
Query: 279 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGP 458
P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T + P
Sbjct: 75 PGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSP 134
Query: 459 EKTSFFQALSIPTKISK 509
AL+I KI K
Sbjct: 135 NDIKILHALNIQCKIFK 151
Score = 37.5 bits (83), Expect = 0.30
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISL-RXSSXVLMGKNTMMRKA 255
K +Y K+ L +Y K +V + NV + Q+ IR L VL GKN++MR+A
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRA 66
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/77 (41%), Positives = 38/77 (49%)
Frame = -3
Query: 503 NFGRDGKSLEERGFLWTEAGVVGGNDD*QWGNGTGTSWSLDFVXQQFVTDLNEVSAGEHE 324
N G + +SLEER W GV G N D WGN T + WS + V D+ + GE E
Sbjct: 180 NLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDE 239
Query: 323 ANVALDVWQQFLEGWIV 273
NV LD QQ W V
Sbjct: 240 TNVTLDERQQLFVVWEV 256
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = -1
Query: 643 IIYLLNNKTI*EWRDVQHVEKVGFRSSNLVTGLQDVYIVDDFNST 509
++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T
Sbjct: 133 VVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGT 177
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +3
Query: 231 KKHYDAQSXKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPG 404
K+ + S + H + NP L+P + GNVG + T+GDL EV ++ KV APAR G
Sbjct: 595 KRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKGDLKEVDKEVAKYKVGAPARAG 654
Query: 405 AIAPLSVVIPAHNTGL 452
++ + V++P NTGL
Sbjct: 655 LVSHIDVIVPPGNTGL 670
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 59.3 bits (137), Expect = 9e-08
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +3
Query: 258 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPA 437
++ LD P LE LL +I+G V F+FT D ++ L +K APA+PG IAP +V+P
Sbjct: 78 EEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPE 137
Query: 438 HNTGLGPEK-TSFFQALSIPTKI--SKVLLKSSTM 533
T P S Q +P +I KV++ T+
Sbjct: 138 GPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTV 172
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVL-MGKNT 240
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR ++ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 241 MMRKA 255
+MR A
Sbjct: 72 LMRIA 76
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/94 (32%), Positives = 48/94 (51%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK + +D L N+ ++L I GNV F+FT D +++ L N + A+ G
Sbjct: 55 GKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQ 114
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
+A V + T + P+ FQ+L+IPTKI K
Sbjct: 115 VAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILK 148
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 491 PYQNFKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSG 649
P + KG IEII + +L+ G K+ +EA LL LNI PF + + Y++G
Sbjct: 143 PTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENG 195
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGP 458
P LEKL+ +I G + T + ++ L N+ APA+PGA+ P VV+PA T L P
Sbjct: 74 PELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAP 133
Query: 459 EK-TSFFQALSIPTKISK 509
QAL IP +I K
Sbjct: 134 GPIVGQMQALGIPARIEK 151
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
KG + I D +LK G+ + AN+LN L I P GL V VY+ G ++
Sbjct: 151 KGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVY 201
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 53.2 bits (122), Expect = 6e-06
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +3
Query: 279 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGL-- 452
P ++ ++ KG V +FT ++ L NK+ AR G IA + VV+PA NTG+
Sbjct: 73 PGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAP 132
Query: 453 GPEKTSFFQALSIPTKISK 509
GP T F +A IPTKI +
Sbjct: 133 GPMLTEFKEA-GIPTKIDQ 150
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 51.6 bits (118), Expect = 2e-05
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Frame = +3
Query: 279 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGL-- 452
P ++K++ + G F+FT + L NK AR G IA + V +PA NTG+
Sbjct: 59 PGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAP 118
Query: 453 GPEKTSFFQALSIPTKISK---VLLKSSTMYTS*SPV 554
GP T F +A IPTKI + +LK +T P+
Sbjct: 119 GPMLTEFKEA-GIPTKIDQGTIWILKDTTPVKKGEPI 154
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 49.2 bits (112), Expect = 9e-05
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Frame = +3
Query: 276 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLG 455
N +EK ++ G GF+FT + ++ ++ N V+ A+PG + +++PA NTG+
Sbjct: 86 NAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGIN 142
Query: 456 PEKT-SFFQALSIPTKI----------SKVLLKSSTMYTS*SPVTRLELLKPTFSTC*TS 602
P S F L IPT+I ++V T+ + + RL +KP + S
Sbjct: 143 PGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLINVKPVYE----S 198
Query: 603 LHSHMVLLLSRYMI 644
L VLL ++Y+I
Sbjct: 199 LKVKAVLLNAKYII 212
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGPEK 464
+E L +++G VFT+ + ++ L +K +APA+ G+IAP +V+PA +T P
Sbjct: 71 VEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGP 130
Query: 465 -TSFFQALSIPTKISK 509
Q + IP KI K
Sbjct: 131 ILGELQQVGIPAKIDK 146
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 306 IKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQA 482
++G VGF FT + EV + N V+ A+PG AP +V+PA T P S F
Sbjct: 90 VRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGK 149
Query: 483 LSIPTKISK 509
L IPT++ +
Sbjct: 150 LKIPTRVQE 158
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 303 HIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 482
++ N+G +FT +L + + + + G IA +++I L P +T FFQA
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQA 135
Query: 483 LSIPTKISK 509
L IPT+ISK
Sbjct: 136 LGIPTRISK 144
Score = 39.5 bits (88), Expect = 0.075
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 491 PYQNFKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIFALKF 670
P + K +IEII D+ ++ + S+ LL L+I P YG+ +K+++ S LK
Sbjct: 139 PTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIFSSKGEINLKI 198
Query: 671 WTSN 682
N
Sbjct: 199 LQMN 202
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGP-E 461
+E + H++G +FT + E+ L K+ AR G IA +V+PA NTG+ P
Sbjct: 80 VEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGP 139
Query: 462 KTSFFQALSIPTKISK 509
S F L IPT++ +
Sbjct: 140 MISNFNKLGIPTRVQE 155
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +1
Query: 19 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRI 198
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 199 SLRXSSXVLMGKNTMMRKAXKTT 267
S++ + + MGKN +MR A T
Sbjct: 69 SMKGYARIFMGKNQLMRYALGKT 91
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 41.9 bits (94), Expect = 0.014
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 285 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGP 458
L+ L +++G VG V T + + +L +K AP G +AP +V+P +TG+ P
Sbjct: 78 LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDP 135
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +1
Query: 73 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRK 252
E+ WK +++ LL+ Y +V + S+Q+Q +R L + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 253 A 255
A
Sbjct: 70 A 70
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 40.7 bits (91), Expect = 0.032
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 312 GNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALS 488
G+ F+FT + ++ K+ + APA+PG +A +V+PA +TGL P S F L
Sbjct: 93 GSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLK 152
Query: 489 IPTKI 503
I T +
Sbjct: 153 IKTMV 157
Score = 37.1 bits (82), Expect = 0.40
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 509 GTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVY 640
GTI I D + KPGD + A+LL L I+P + +K Y
Sbjct: 160 GTIHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAY 203
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 39.9 bits (89), Expect = 0.056
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 276 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLG 455
NP KL+ ++ V T + ++ L +K AP + GAIAP + + + +TG+
Sbjct: 78 NPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMP 137
Query: 456 PEK-TSFFQALSIPTKISK 509
P S +A+ IP I K
Sbjct: 138 PGPFLSELKAVGIPAAIDK 156
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 38.3 bits (85), Expect = 0.17
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 327 VFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKI 503
+FT + E+ L K + +PG IA +VIP NTGL P S F L IPT+I
Sbjct: 92 LFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRI 151
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 512 TIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTI 655
+I I D + KPGD + A+LL L+I+ + +K YD G I
Sbjct: 155 SIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGII 202
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 37.1 bits (82), Expect = 0.40
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 285 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGP-E 461
+ ++ I + +FT D + L K+ AP + GA+AP+ +VI T L P
Sbjct: 72 MNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGP 131
Query: 462 KTSFFQALSIPTKI--SKVLLK 521
Q L IP+ I KV++K
Sbjct: 132 VVGELQNLGIPSGIDGGKVVVK 153
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 88 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRKA 255
WK I LL Y + +GS+Q+Q+IR R + + + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARS 66
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 36.3 bits (80), Expect = 0.70
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2
Query: 494 YQNFKGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTI 655
YQ G I I + + KPGD + A LL L I P G+ VK D G +
Sbjct: 153 YQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVL 206
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 35.9 bits (79), Expect = 0.92
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 261 DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAH 440
D L ++L ++ G + V+T + ++ L K + A+ G IAP +VIP
Sbjct: 73 DSLPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKG 132
Query: 441 NTGLGP-EKTSFFQALSIPTKI--SKVLLKSS 527
T P FQ + IP I KV++K +
Sbjct: 133 PTSFKPGPLVGEFQQVGIPAGIEGGKVVIKDT 164
>UniRef50_UPI0000E48534 Cluster: PREDICTED: similar to ankyrin
2,3/unc44; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to ankyrin 2,3/unc44 -
Strongylocentrotus purpuratus
Length = 1255
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/84 (26%), Positives = 37/84 (44%)
Frame = +1
Query: 223 LMGKNTMMRKAXKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWXTKSRLQLVP 402
L+GK + +A WT + + + H A SC A+ L+ T Q V
Sbjct: 795 LIGKGADLNRADNDDWTRFRAASSNRHVDCAEFLSCQGAD--LKRTGYDGSTPLGSQSVD 852
Query: 403 VPLPHCQSSFPPTTPASVQRKPLS 474
P +SF T P+S +++P++
Sbjct: 853 TEYPETSTSFKLTPPSSPRKRPIA 876
>UniRef50_A4CNC1 Cluster: Putative uncharacterized protein; n=2;
Flavobacteriales|Rep: Putative uncharacterized protein -
Robiginitalea biformata HTCC2501
Length = 1151
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -1
Query: 631 LNNKTI*EWRDVQ-HVEKVGFRSSNLVTGLQDV--YIVDDFNSTFEILVGMERAWKKEVF 461
LNN TI +WRD+ E++ G D+ I+ DFN + G +EV+
Sbjct: 155 LNNDTIHDWRDLTVEQEEIWRLEDTTGNGTADISTRILHDFNEEVTDVAGALLVDGEEVY 214
Query: 460 SGPRPVLWAGMTTDNG 413
G P +W +T +NG
Sbjct: 215 VGVAPDMWR-LTDENG 229
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +1
Query: 88 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRKA 255
WK + +I + ++E+ +V + + Q+QQIR +LR ++ V M +NT++ A
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHA 66
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 HIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQ 479
H +G +FT + ++ L K + A+PG AP +VIP T P Q
Sbjct: 80 HAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQ 139
Query: 480 ALSIPTKI 503
+ IP I
Sbjct: 140 QVGIPAAI 147
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 35.1 bits (77), Expect = 1.6
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 285 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLXN-KVQAPARPGAIAPLSVVIPAHNTGL--G 455
+EKL ++ G F+FT+ D + + N K++ A PG A VVIPA +TG+ G
Sbjct: 79 IEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 137
Query: 456 PEKTSFFQALSIPTKI 503
P S F L + TK+
Sbjct: 138 P-ILSVFGKLKVQTKV 152
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 333 TRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFFQALSIPTKIS 506
T ++ ++ + +KV P + G IAP +VIP N +GP +T +AL + TK++
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTKVT 144
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 37 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSS 216
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 217 XVLMGKNTMMR 249
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 267 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVIPAHNT 446
L ++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 447 GLGP-EKTSFFQALSIPTKI 503
P Q+ IP I
Sbjct: 131 SFSPGPMVGKLQSAGIPAAI 150
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 264 HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 359
+L NN L+KLLP I+G ++ RGDL E++
Sbjct: 831 NLANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_A4T4R5 Cluster: Putative outer membrane adhesin like
protein precursor; n=1; Mycobacterium gilvum
PYR-GCK|Rep: Putative outer membrane adhesin like
protein precursor - Mycobacterium gilvum PYR-GCK
Length = 567
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 497 GRDGKSLEERGFLWTEAGVVGGNDD*QWGNGTGTS 393
GR G + RGF+W G + D WG+ GTS
Sbjct: 488 GRGGSQMAARGFVWRTDGNLQNGDIVVWGSSAGTS 522
>UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 1522
Score = 33.1 bits (72), Expect = 6.5
Identities = 23/68 (33%), Positives = 29/68 (42%)
Frame = +1
Query: 136 PKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRKAXKTTWTTIQPSRNCCHTSRA 315
P A S + Q + R S +MGK +MR+A T T+ PS TSR
Sbjct: 315 PSTDSTAAPGTSSSSVAQASLKSRGRSLSVMGKKKVMRRASTGTATSRPPS---AATSRR 371
Query: 316 TLASCSPA 339
SCS A
Sbjct: 372 PSVSCSAA 379
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 509 GTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
G + + + K G+ V A +L+ L I P GL ++ YD GTI+
Sbjct: 153 GKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIY 202
>UniRef50_Q4SUE4 Cluster: Chromosome undetermined SCAF13964, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13964, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 445
Score = 32.7 bits (71), Expect = 8.6
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Frame = +1
Query: 265 TWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCW-----XTKSRLQLVPVPLPHCQSS 429
TW +PSR C +R + S P +L+++ N + S QL P+ S
Sbjct: 37 TWWAGKPSRECPLCNRRSSRSDPPCNLALKNLCNAFLQQKSQASSGSQLCPLHSTATTDS 96
Query: 430 FPPTTPASVQRKPLSSKLFPSLPKFQRYY*NHQRC 534
P T P + + L L P K + Q C
Sbjct: 97 DPRTKPPGITGEELGKLLRPLQAKLALFQHVKQNC 131
>UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein
kinase; n=8; Oryza sativa|Rep: Leucine rich repeat
containing protein kinase - Oryza sativa (Rice)
Length = 1074
Score = 32.7 bits (71), Expect = 8.6
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Frame = +3
Query: 267 LDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSV---- 425
L N AL+KL LPH ++GN+GF+ + + ++ D +L + A P + LS
Sbjct: 396 LGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARLIS 455
Query: 426 VIPAHN--TGLGPEKTSFFQALSI 491
I HN G PEK S +L +
Sbjct: 456 FIADHNKLAGSLPEKMSNLSSLEL 479
>UniRef50_Q012Y6 Cluster: Chromosome 08 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 08 contig 1, DNA
sequence - Ostreococcus tauri
Length = 241
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 289 RNCCHTSRATLASCSPAETSLRSVTNCWXTKSRLQLVPVPLPHCQSSFPPTTPASVQRK 465
R+C +AS +P T+ +S + T SR + P ++S PPTTPAS K
Sbjct: 110 RDCTFQPHVVVASSAPPPTT-KSASTTSGTPSRAPATTLATP-ARASRPPTTPASATSK 166
>UniRef50_A0MF19 Cluster: Putative uncharacterized protein; n=2;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 230
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 219 RAHGKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRD-KLLXNKVQAPA 395
+ + + H+ A D + +P + H KGNV + D KLL VQ
Sbjct: 17 KTNDQDHFKAGFTDDFVPTSPGNSPGVGHKKGNVNVEGFQDDFKPTEGRKLLKTNVQDHF 76
Query: 396 RPGAIAPLSVVIPAHNTGLGPEK 464
+ G+ + P H+ G+G +K
Sbjct: 77 KTGSTDDFAPTSPGHSPGVGHKK 99
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 KDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGAIAPLSVVI 431
K H D+ P L L ++KG +FT+ E+R++L + RPGA A +V I
Sbjct: 73 KTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRI 131
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,893,770
Number of Sequences: 1657284
Number of extensions: 15300613
Number of successful extensions: 46406
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 44196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46365
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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