Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20860
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.1  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   5.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +1

Query: 130  EYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTMMRKA 255
            EYPKC+ V  +       +     +R  S     KN ++  A
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAA 2484


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 224 SWEKTL*CAKXQRPPGQQSSPRETVATHQGQR 319
           S EK   C    R   Q SS    + TH G+R
Sbjct: 45  SGEKPFRCPVCDRRFSQSSSVTTHMRTHSGER 76


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 331 NTKPTLPLMCGNSFSRAGLL 272
           N KP +  +CG S++R   L
Sbjct: 246 NQKPNVCRICGKSYARPSTL 265



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 224 SWEKTL*CAKXQRPPGQQSSPRETVATHQGQR 319
           S EK   C    R   Q SS    + TH G+R
Sbjct: 301 SGEKPFRCPVCDRRFSQSSSVTTHMRTHSGER 332


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 97  NYFVKIIQLLDEYPKCF 147
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory
          receptor candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 4  SRAFCLVLKFHRSPYATLSR 63
          S  FCLV   HR  Y  LS+
Sbjct: 20 SEIFCLVNFNHRESYFRLSK 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,769
Number of Sequences: 336
Number of extensions: 3710
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)