Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20860
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 137 3e-32
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 137 3e-32
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 137 3e-32
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 137 3e-32
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 136 7e-32
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 135 1e-31
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 134 3e-31
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 129 1e-29
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 67 6e-11
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 2.9
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 3.8
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 3.8
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 3.8
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 3.8
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 3.8
AK125914-1|BAC86343.1| 167|Homo sapiens protein ( Homo sapiens ... 31 3.8
BC093696-1|AAH93696.1| 1173|Homo sapiens ubiquitination factor E... 30 8.8
AL590639-5|CAI14687.1| 1173|Homo sapiens ubiquitination factor E... 30 8.8
AL590639-4|CAI14688.1| 1302|Homo sapiens ubiquitination factor E... 30 8.8
AL096841-2|CAI21860.1| 1173|Homo sapiens ubiquitination factor E... 30 8.8
AL096841-1|CAI21859.1| 1302|Homo sapiens ubiquitination factor E... 30 8.8
AK128029-1|BAC87236.1| 167|Homo sapiens protein ( Homo sapiens ... 30 8.8
AF331520-1|AAK69622.1| 1173|Homo sapiens ubiquitin-fusion degrad... 30 8.8
AF091093-1|AAC72962.1| 186|Homo sapiens unknown protein. 30 8.8
AF043117-1|AAD02233.1| 1302|Homo sapiens ubiquitin-fusion degrad... 30 8.8
AB028839-1|BAB40446.1| 1173|Homo sapiens homzygously deleted in ... 30 8.8
AB014584-1|BAA31659.3| 1218|Homo sapiens KIAA0684 protein protein. 30 8.8
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 137 bits (332), Expect = 3e-32
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 136 bits (329), Expect = 7e-32
Identities = 64/94 (68%), Positives = 74/94 (78%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
G+ ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GRNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 117 bits (282), Expect = 3e-26
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 135 bits (327), Expect = 1e-31
Identities = 65/94 (69%), Positives = 73/94 (77%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 117 bits (282), Expect = 3e-26
Identities = 54/66 (81%), Positives = 60/66 (90%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 134 bits (324), Expect = 3e-31
Identities = 64/94 (68%), Positives = 73/94 (77%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSF QAL I TKIS+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFSQALGITTKISR 149
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 506 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
+GTIEI++DV ++K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 199
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 129 bits (311), Expect = 1e-29
Identities = 63/94 (67%), Positives = 73/94 (77%)
Frame = +3
Query: 228 GKKHYDAQSXKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLXNKVQAPARPGA 407
GK ++ + HL+NNPALEKLLP ++GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 114
Query: 408 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISK 509
IAP V +PA NTGLGPEKTSFFQAL I TKIS+
Sbjct: 115 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 148
Score = 118 bits (285), Expect = 1e-26
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = +1
Query: 64 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRXSSXVLMGKNTM 243
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLR + VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 244 MRKAXK 261
MRKA +
Sbjct: 61 MRKAIR 66
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 66.9 bits (156), Expect = 6e-11
Identities = 29/38 (76%), Positives = 36/38 (94%)
Frame = +2
Query: 545 KPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGTIF 658
K GDKVGASEA LLNMLNISPFS+GLV++QV+D+G+I+
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIY 39
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -2
Query: 675 VQNFSAKIVPESYTCLTTRPYENGEMFNMLRRLASEAPTLSPGFKMCTSL 526
+ + + +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 231 IGTYHNNMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 645 ESYTCLTTRPYENGEMFNMLRRLASEAPTLSPGFKMCTSL 526
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 276 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 645 ESYTCLTTRPYENGEMFNMLRRLASEAPTLSPGFKMCTSL 526
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 645 ESYTCLTTRPYENGEMFNMLRRLASEAPTLSPGFKMCTSL 526
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 645 ESYTCLTTRPYENGEMFNMLRRLASEAPTLSPGFKMCTSL 526
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.1 bits (67), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 645 ESYTCLTTRPYENGEMFNMLRRLASEAPTLSPGFKMCTSL 526
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AK125914-1|BAC86343.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ43926 fis, clone TESTI4012556. ).
Length = 167
Score = 31.1 bits (67), Expect = 3.8
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 286 SRNCCHTSRATLA-SCSPAETSLRSVTNCWXTKSRLQLVPVPL--PHCQSSFPPTTPASV 456
SR+ C SR TL + SP TS R +T S+L++ P P C++ P++ A
Sbjct: 12 SRSSC--SRTTLRPAASPNTTSSRGLTVHPPCSSKLRMDPTPAWPASCEALMGPSSSAGP 69
Query: 457 QRKPLSSKLFPSLP 498
R L + SLP
Sbjct: 70 ARLRLPPRRHSSLP 83
>BC093696-1|AAH93696.1| 1173|Homo sapiens ubiquitination factor E4B
protein.
Length = 1173
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AL590639-5|CAI14687.1| 1173|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1173
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AL590639-4|CAI14688.1| 1302|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1302
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1138 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1183
>AL096841-2|CAI21860.1| 1173|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1173
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AL096841-1|CAI21859.1| 1302|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1302
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1138 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1183
>AK128029-1|BAC87236.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ46148 fis, clone TESTI4000600. ).
Length = 167
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 286 SRNCCHTSRATLA-SCSPAETSLRSVTNCWXTKSRLQLVPVPL--PHCQSSFPPTTPASV 456
SR+ C SR TL + SP TS R T S+L++ P P C++ P++ A
Sbjct: 12 SRSSC--SRTTLRPAASPNTTSSRGQTVHPPCSSKLRMDPTPAWPASCEALMGPSSSAGP 69
Query: 457 QRKPLSSKLFPSLP 498
R L + SLP
Sbjct: 70 ARLRLPPRRHSSLP 83
>AF331520-1|AAK69622.1| 1173|Homo sapiens ubiquitin-fusion degradation
protein 2 protein.
Length = 1173
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AF091093-1|AAC72962.1| 186|Homo sapiens unknown protein.
Length = 186
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 22 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 67
>AF043117-1|AAD02233.1| 1302|Homo sapiens ubiquitin-fusion degradation
protein 2 protein.
Length = 1302
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1138 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1183
>AB028839-1|BAB40446.1| 1173|Homo sapiens homzygously deleted in
neuroblastoma-1/UFD2 protein.
Length = 1173
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1009 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1054
>AB014584-1|BAA31659.3| 1218|Homo sapiens KIAA0684 protein protein.
Length = 1218
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 598 VQHVEKVGFRSSNLVTGLQDVYIVDDFNSTFEILVGMERAWKKEVF 461
V++ EK GF L+ L D+Y+ D + + +R++ KE+F
Sbjct: 1054 VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELF 1099
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,694,030
Number of Sequences: 237096
Number of extensions: 2465365
Number of successful extensions: 10097
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 9700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10085
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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