Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20858
(675 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 41 8e-04
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 39 0.004
10_07_0139 + 13327851-13327880,13327999-13329049,13329089-133296... 36 0.030
06_03_1487 + 30477615-30477658,30477778-30477891,30477941-304780... 33 0.28
06_03_0038 - 15778446-15778577,15778685-15779020,15779106-157792... 33 0.28
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 33 0.28
02_05_1221 - 35023734-35023868,35024002-35024217,35024349-350246... 32 0.36
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 32 0.36
12_02_0161 + 14659338-14659467,14659553-14659888,14660034-146602... 32 0.48
08_01_0008 - 65366-65497,65588-65759,65846-65972,66058-66140,662... 31 1.1
09_01_0002 - 81412-81944,82191-82539 30 1.5
02_03_0176 + 16010806-16011095,16011983-16012061,16012389-160124... 30 1.5
02_01_0302 - 2021221-2023305 30 1.5
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 30 1.9
07_03_1461 - 26700613-26700621,26700784-26700851,26701778-267019... 30 1.9
07_03_1178 - 24580294-24580727,24581749-24582274 29 2.6
03_01_0178 + 1437263-1438017,1438754-1438858,1438950-1439072,143... 29 2.6
01_06_0650 + 30872350-30872736,30873388-30873639,30873723-308738... 29 2.6
06_03_0868 - 25544933-25544938,25544939-25545142,25545494-255457... 29 3.4
09_06_0127 + 21019266-21019670 29 4.5
08_02_0491 + 17749763-17750143,17750694-17750751,17750846-177508... 29 4.5
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101... 29 4.5
05_06_0060 - 25266735-25267210,25267323-25267569,25267650-252683... 29 4.5
05_03_0035 - 7592177-7592938 29 4.5
05_03_0033 - 7585267-7586028 29 4.5
12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615,524... 28 5.9
10_08_0797 + 20646091-20646519,20646531-20647460 28 5.9
07_01_0975 + 8223269-8224354 28 5.9
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 28 5.9
01_03_0195 - 13674138-13674438,13674518-13674688,13674771-136756... 28 5.9
10_08_0842 - 20954712-20957738 28 7.8
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 28 7.8
07_03_1349 + 25951445-25951774,25953301-25953639 28 7.8
04_02_0023 + 8655524-8655653,8655742-8656475,8656553-8656918,865... 28 7.8
04_01_0582 - 7558115-7558415,7558495-7558665,7558748-7559189,755... 28 7.8
03_06_0060 + 31341233-31342009,31342752-31342871,31343401-313435... 28 7.8
03_03_0059 + 14149796-14150350,14152303-14152433,14153479-141535... 28 7.8
01_06_1389 - 36969414-36969436,36970027-36970394,36970474-369706... 28 7.8
01_03_0151 - 13229861-13230347,13230442-13230540,13230701-132309... 28 7.8
01_01_0994 - 7861310-7862119,7862378-7862498,7862718-7862901,786... 28 7.8
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 41.1 bits (92), Expect = 8e-04
Identities = 12/37 (32%), Positives = 29/37 (78%)
Frame = +1
Query: 7 LADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAE 117
L + NP+L +++K LG++W+ +T ++++P+VE+++
Sbjct: 576 LKNSNPELATTEIAKKLGERWQKMTAEEKQPYVEQSQ 612
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 38.7 bits (86), Expect = 0.004
Identities = 10/37 (27%), Positives = 28/37 (75%)
Frame = +1
Query: 7 LADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAE 117
+ + NPDL +++K LG+ W+ +T ++++P++++++
Sbjct: 617 MKNNNPDLPTTEIAKKLGEMWQKMTGEEKQPYIQQSQ 653
>10_07_0139 +
13327851-13327880,13327999-13329049,13329089-13329648,
13329757-13329904,13330935-13331024,13331148-13331208,
13331301-13331450,13331571-13331629,13332148-13332282,
13333028-13333119,13333210-13333278
Length = 814
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 278 PDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQPKLPY 457
P ++ ++ P +G TSP+ + +T QFN SS + + +V++
Sbjct: 192 PKSQIANGPSSGRQKVFTSPVPYNIKTPAQFNSQTANKPSSDPIESDSDSPQVVE----V 247
Query: 458 RPQMRLLSRTRKKTSSTGEAK 520
RP R L R ++ T ST + K
Sbjct: 248 RPITRSLGRKKEPTGSTHQDK 268
>06_03_1487 +
30477615-30477658,30477778-30477891,30477941-30478028,
30478186-30478230,30478330-30478410,30478498-30478608,
30478907-30478927
Length = 167
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 KKLADENPDLHN-ADLSKMLGKKWRSLTPQDRRPFVEEAERCES 129
K+ ++NP + A + K G +W+SLT D+ P+V +A + ++
Sbjct: 68 KEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKA 111
>06_03_0038 -
15778446-15778577,15778685-15779020,15779106-15779225,
15779280-15779765,15779861-15779994,15780111-15780230,
15784881-15785018,15785404-15786079,15786179-15786340,
15786424-15786618,15786839-15787084,15787758-15787952
Length = 979
Score = 32.7 bits (71), Expect = 0.28
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Frame = +2
Query: 134 YDRAS*LQVQT*TAKAKQGQTQPTCHASQRPFLCLCRFRIAYATGTDSPDTRF-SHN-PG 307
YDR S L A AKQ + TCHA + + P + SH+ P
Sbjct: 336 YDRQSKLSAD---AIAKQIRLVQTCHARVSDHIVSIIRGESRTQPPLGPQPQLASHSQPD 392
Query: 308 AGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQPKLPYRPQMRLLS 481
+ P SP + + Q + N TP+ SP SP PQ ++ P + P ++ S
Sbjct: 393 SQHGPV-ASPTSEEAQDHHIHN----TPDISPTNSPPPQPCRIITPDAAFNPTPQITS 445
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 4 KLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEE-AERCESYI 135
++ E+PD ++S LG KW++L ++++P+ E + E+Y+
Sbjct: 174 EIKKESPDADFKEVSNALGAKWKALGAEEKQPYEERYRQEKEAYL 218
>02_05_1221 -
35023734-35023868,35024002-35024217,35024349-35024675,
35024845-35025218,35025560-35025647,35025767-35025910,
35026053-35026178,35026264-35026412,35026539-35026644,
35026757-35026900,35027018-35027194,35027304-35027453,
35027570-35027788
Length = 784
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 255 RTRQAPTRRTLASPTTPEPDSHLTEPRLLPRTTKQTSSSTVTF 383
R R+ P+RR LA T P+P + PR RT S+ F
Sbjct: 33 RRRRRPSRRVLAVATEPKPSASAPAPRSRSRTRTPNDISSTRF 75
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +1
Query: 37 ADLSKMLGKKWRSLTPQDRRPFVEEA 114
A +SK G+KWR+++ Q++ P+V++A
Sbjct: 62 AAVSKAAGEKWRAMSEQEKAPYVDKA 87
>12_02_0161 +
14659338-14659467,14659553-14659888,14660034-14660266,
14660344-14660805,14660887-14661719,14661802-14661972,
14662052-14662352
Length = 821
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 587 SQPPWPQLVWPTAVRHVHTEDAHGEP 664
S+ PW Q +WPT V + DA G P
Sbjct: 64 SRNPWSQNIWPTTVLVIREVDASGRP 89
>08_01_0008 -
65366-65497,65588-65759,65846-65972,66058-66140,
66232-66329
Length = 203
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/39 (28%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +1
Query: 1 KKLADENPDLHNAD-LSKMLGKKWRSLTPQDRRPFVEEA 114
K+ E+PD + ++K G++W+S++ +D++P++++A
Sbjct: 108 KEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKA 146
>09_01_0002 - 81412-81944,82191-82539
Length = 293
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +2
Query: 302 PGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEP--QAEEVLQPKLPYRPQM 469
PGA F ++ + SD + GH+ P P EEVLQ P P +
Sbjct: 116 PGAAFCLHQIPNMGSDDDDDDGMEGHISPVREGEPHGPNPHDNGEEVLQGLPPSPPPL 173
>02_03_0176 +
16010806-16011095,16011983-16012061,16012389-16012464,
16012541-16012630,16012878-16013031,16013172-16013181,
16013240-16013407,16014087-16014485,16014580-16014990
Length = 558
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEE 111
+KL E P +SKM+G++W +L P+D+ + E+
Sbjct: 392 RKLKPEYPGQDRL-ISKMIGERWNNLGPEDKAVYQEK 427
>02_01_0302 - 2021221-2023305
Length = 694
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 263 TGTDSPDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQ 424
T D PD RF+ PG+ + P ++P +S + +G+ Q P P SP Q
Sbjct: 556 TSADRPDVRFAPPPGS-YGPIPSTPPSSGSPPSPS-SGY-QPPSGQPGASPPTQ 606
>10_08_0106 +
14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 386 TPESSPARSPEPQAEEVL---QPKLPYRPQMRLLSRTRKKTSSTGEAKDFEPFVD 541
T ES + P+A V+ Q K+P + + + +KK + G A+D++P+ D
Sbjct: 593 TMESKILKEKTPEATPVVKESQEKMPVVGEQVVKKKKKKKVRAPGNAEDWKPYQD 647
>07_03_1461 -
26700613-26700621,26700784-26700851,26701778-26701919,
26702011-26702318,26702415-26702481,26702543-26702664,
26702763-26702815,26702924-26703006,26703092-26703160,
26703235-26703633
Length = 439
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 371 NGHVQTPESSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKD 523
NG + T PAR P P + P ++ + + ++R + S G+ ++
Sbjct: 274 NGRLYTRNQEPARRPLPPMAQQYDPDQSWKQEQSAMRQSRPQELSNGQTRE 324
>07_03_1178 - 24580294-24580727,24581749-24582274
Length = 319
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +1
Query: 358 KPAVQRSRSNAGIVS------GKVSGAASRRSTPAEAPLPTPDASPVENEKENFQYGRGE 519
KP + RS S A I S G G + PA APL + P E E+E ++ +
Sbjct: 54 KPRLVRSSSIASICSLPGGGGGGAGGDDVATAAPAPAPLMRTSSLPTETEEERWRRREMQ 113
Query: 520 GL*TLRRYPTRILRTN 567
L L R+ R N
Sbjct: 114 SLKRLEAKRKRLERRN 129
>03_01_0178 +
1437263-1438017,1438754-1438858,1438950-1439072,
1439908-1440078,1440163-1440292,1440372-1440581,
1440675-1440773
Length = 530
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 374 GHVQTPESSPARSPEPQAEEVLQPKLPYRPQMRLLSR 484
G V E E +AEEV+ PKLP +P + L R
Sbjct: 427 GEVNLVEWLKTMVAERKAEEVVDPKLPEKPSPKALKR 463
>01_06_0650 +
30872350-30872736,30873388-30873639,30873723-30873818,
30874005-30874173,30874452-30874552,30874910-30875002,
30876018-30876089,30876509-30876628,30876709-30876759,
30877621-30877809,30878099-30878266
Length = 565
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +2
Query: 317 SPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKK 496
+P R PL + T + TP S P+RS P + P + +R R R+
Sbjct: 26 APMRCPPLPAAAPTASLLSWRGFTPSSEPSRSAPPPPPLPMPPFAGFLAGIRSFRRGRRG 85
Query: 497 TSSTGEAKDFEP 532
S+ A+ +P
Sbjct: 86 QSAARRAQPQDP 97
>06_03_0868 -
25544933-25544938,25544939-25545142,25545494-25545751,
25546625-25546906
Length = 249
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +1
Query: 292 LPQPRSRILTLQNLASCLGLPNKPAVQRSRSNA-----GIVSGKVSGAASRRSTPAEAPL 456
LP PR L + + P PA++ + A G + ++ AA+ + AEA
Sbjct: 16 LPAPRRPSLPPRATSILTPAPRSPALRVVDAFAAGRWGGRAASRLPAAAAAAAAAAEAGP 75
Query: 457 PTPDASPVENEKE 495
P P SP E+E E
Sbjct: 76 PDPAPSPAEDEAE 88
>09_06_0127 + 21019266-21019670
Length = 134
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 400 SGKVSGAASRRSTPAEAPLPTPDASP 477
SG S A+S RS A P PTP A+P
Sbjct: 60 SGSSSTASSSRSVNAPPPPPTPTAAP 85
>08_02_0491 +
17749763-17750143,17750694-17750751,17750846-17750891,
17750932-17750998,17751100-17751108
Length = 186
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 343 LGLPNKPAVQRSRSNAGIVSGKVSGAASR 429
LG+P+ A R+R G +G+V+GA +R
Sbjct: 34 LGVPSARACGRTRRRRGCAAGRVAGAGAR 62
>07_01_0139 -
1014952-1015165,1015271-1015350,1015420-1015629,
1015925-1016044,1016650-1016709,1017129-1017204,
1018189-1018352,1018428-1018490,1018815-1018902,
1018997-1019647,1019965-1020449
Length = 736
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 295 PQPRSRILTLQNLASCLGLPNKPAVQRSRSNAGIVS-GKVSGAASRRSTPAEAPLPTPDA 471
P PR R T ++ +G P + RS S+A + + A+ ++P PLP P
Sbjct: 88 PPPRGRAST----SAAVGHPVSIPIARSASSAEFRAVHQPPPRAATAASPVLLPLPLPSP 143
Query: 472 SPVENE 489
PVE++
Sbjct: 144 KPVESD 149
>05_06_0060 -
25266735-25267210,25267323-25267569,25267650-25268345,
25268457-25268709,25268786-25269261,25270760-25270909
Length = 765
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 415 GAASRRSTPAEAPLPTPDASPVENE 489
GAA R APLP PD+SP E
Sbjct: 141 GAAGPRVAIFSAPLPPPDSSPARQE 165
>05_03_0035 - 7592177-7592938
Length = 253
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 386 TPESSP-ARS-PEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAK 520
TP++ P A S PEP+ E + K +P+ + S+++ + S EAK
Sbjct: 180 TPQTEPRAESQPEPKTEPKSESKAEPKPERKSYSKSKPEPESKPEAK 226
>05_03_0033 - 7585267-7586028
Length = 253
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 386 TPESSP-ARS-PEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAK 520
TP++ P A S PEP+ E + K +P+ + S+++ + S EAK
Sbjct: 180 TPQTEPKAESQPEPKTEPKSESKAEPKPERKSYSKSKPEPESKPEAK 226
>12_01_0633 -
5241098-5241283,5241361-5241453,5241555-5241615,
5241703-5241813,5241960-5242145,5242229-5242590,
5242730-5243152,5243159-5244382,5244468-5244707
Length = 961
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 251 IAYATGTDSPDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAE 430
I + GTD+ + PG G P + +D + + + PE P + A+
Sbjct: 527 IFFGLGTDAGEKPVLPKPGLGKPPRPPKRMVTDKADDPELDKENPVPEVPPEIALPETAK 586
Query: 431 EVLQPK 448
E+ PK
Sbjct: 587 EIAPPK 592
>10_08_0797 + 20646091-20646519,20646531-20647460
Length = 452
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +1
Query: 280 GHSLLPQPRSRILTLQNLASCLGLPNKPAVQRSRSNAGIVSGKVSGAASRRSTPAEAPLP 459
G S++ R L +LA+ P P + R+ AG + S PA AP P
Sbjct: 70 GWSVVVDVRDTSCRLSHLATGATAP-LPRLNAVRATAGSRVVHLGYEHSAAPAPAPAPAP 128
Query: 460 TPDASPVENEKENFQYGRG 516
P + ++NF+ G
Sbjct: 129 APAKTTARRHRKNFRVPPG 147
>07_01_0975 + 8223269-8224354
Length = 361
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 382 SNAGIVSGKVSGAASR--RSTPAEAPLPTPDASPVENEKENFQYGRGEG 522
S+ G SG G +S S PAE P P+ A P E YG EG
Sbjct: 290 SSYGAASGPAEGPSSSGAASGPAEGPSPSGAAGPAEGPS---SYGSTEG 335
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +1
Query: 316 LTLQNLASCLGLPNKPAVQRSRSNAGIVSGKVSGAAS-----RRSTPAEAPLPTPDASPV 480
LT++ L++ + P V+ I G G A+ R PAE PL P
Sbjct: 557 LTVEALSNAIRFMLDPEVKSRTMELAIAIGNEDGVAAAVDSFHRHLPAELPLAPPPTDVK 616
Query: 481 ENEKENFQY 507
E + + FQ+
Sbjct: 617 EEQLDFFQW 625
>01_03_0195 -
13674138-13674438,13674518-13674688,13674771-13675603,
13675685-13676146,13676225-13676958,13677047-13677176
Length = 876
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/90 (24%), Positives = 38/90 (42%)
Frame = +2
Query: 395 SSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKDFEPFVDIRHVFSVQIIQ 574
S+P +P +Q + P ++ T++ + + E D S +
Sbjct: 2 STPGANPPSPTPARIQEEA--NPATEAVAEGHPATTAVQQPEIHELPQDQHTSMSGETSA 59
Query: 575 ARSYSQPPWPQLVWPTAVRHVHTEDAHGEP 664
+RS S+ P Q +WPT V+ + DA G P
Sbjct: 60 SRS-SRNPRSQNIWPTTVQVIREVDASGRP 88
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 525 LNPSSISDTYSPYKSYRPGPTRSPRGRNWYGQRLYVMCTQRTLTES 662
+NP S+ + +S ++ R G P G W Q L + + L E+
Sbjct: 551 MNPVSLVENHSACRTNRAGQRVLPNGHVWKPQLLLLCFASKVLAEA 596
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Frame = +2
Query: 260 ATGTDSPDTRFSH-NPGAGFSPYRTSPLASDYQTNQQFNGH--VQTPESSPA--RSPEPQ 424
A+ DSP S P P P+AS Q ++ P +SP + P P
Sbjct: 219 ASPRDSPIASPSRPEPPVASPPGPEPPVASPPVPEPQVASPPVLEPPVASPQTEKDPMPD 278
Query: 425 AEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKDF 526
E QP+ P R + ++ RT K + + K +
Sbjct: 279 QPEQSQPEEPKRADVPVMVRTHKHKAKSASKKHY 312
>07_03_1349 + 25951445-25951774,25953301-25953639
Length = 222
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 334 ASCLGLPNKPAVQ-RSRSNAGIVSGKVSGAASRRSTPAEAPLPTPDASPVENEKE 495
A+ G+PNKP RSR + + A + STP TP A P + E
Sbjct: 142 ATARGIPNKPPADIRSREDT-----VIQAARAELSTPKPDEATTPSAQPASAQAE 191
>04_02_0023 +
8655524-8655653,8655742-8656475,8656553-8656918,
8657062-8657183,8657210-8657786
Length = 642
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/90 (21%), Positives = 37/90 (41%)
Frame = +2
Query: 395 SSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKDFEPFVDIRHVFSVQIIQ 574
++P+ +P +Q ++ P ++ T++ E + +H+
Sbjct: 2 TTPSENPPSPTPARIQEEV--NPATETVAEGHPSTTAV-EQPEIHELPQEQHMSMSGGTS 58
Query: 575 ARSYSQPPWPQLVWPTAVRHVHTEDAHGEP 664
A S+ P Q +WPT V+ + DA G P
Sbjct: 59 ASRSSRNPRSQNIWPTTVQVIREVDASGRP 88
>04_01_0582 -
7558115-7558415,7558495-7558665,7558748-7559189,
7559301-7559580,7559662-7560123,7560202-7560935,
7561024-7561153
Length = 839
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/90 (23%), Positives = 39/90 (43%)
Frame = +2
Query: 395 SSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKDFEPFVDIRHVFSVQIIQ 574
S+P +P +Q + P + ++ T++ + + E + S +
Sbjct: 2 STPGANPPSPTPARIQEEA--NPATKAVAEGHPATTAVQQPEIHELPQEQHTSMSSETSA 59
Query: 575 ARSYSQPPWPQLVWPTAVRHVHTEDAHGEP 664
+RS S+ P Q +WPT V+ + DA G P
Sbjct: 60 SRS-SRNPRSQNIWPTTVQVIREVDASGRP 88
>03_06_0060 +
31341233-31342009,31342752-31342871,31343401-31343517,
31343615-31343704,31344279-31344386,31345124-31345306
Length = 464
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 278 PDTRF-SHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEP 421
P T F +H+ G SP RT+P+ NG V +P + P R P P
Sbjct: 130 PSTPFMTHSSGFASSP-RTAPVKKSL-----LNGFVSSPLNRPIRQPSP 172
>03_03_0059 +
14149796-14150350,14152303-14152433,14153479-14153520,
14153632-14153740,14154262-14154340,14154437-14154733,
14154820-14154932,14155375-14155482,14155554-14155616,
14155698-14155865,14156283-14156348
Length = 576
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 453 GSFGWSTSSACGSGDLAGDDSGV 385
G FG++ ++ C G+L GDD V
Sbjct: 156 GHFGYTCAATCKKGELKGDDVAV 178
>01_06_1389 -
36969414-36969436,36970027-36970394,36970474-36970644,
36970727-36971559,36971642-36972103,36972182-36972915,
36973004-36973133
Length = 906
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 545 RHVFSVQIIQARSYSQPPWPQLVWPTAVRHVHTEDAHGEP 664
+H A S+ P Q +WPT V+ + DA G P
Sbjct: 49 QHTLMSGATSASRSSRNPRSQNIWPTTVQVIREIDASGRP 88
>01_03_0151 -
13229861-13230347,13230442-13230540,13230701-13230918,
13231210-13231317,13231366-13231518,13232962-13233015,
13233276-13233374,13234458-13234551,13234638-13234715,
13237696-13237766,13238321-13238416,13238505-13238582,
13238683-13238751,13238830-13238897,13239038-13239115,
13239190-13239289,13240002-13240061,13240488-13240579,
13241730-13241779,13241870-13241954,13242035-13242134,
13242933-13243013,13244827-13244907
Length = 832
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 553 YVSDIDEGFKVLRLSRTGSFLSRSRQETHLGSVRELRLEY 434
+V + EG K L + SF + + H GS++ RL+Y
Sbjct: 524 HVQNYQEGLKQLIIYANESFWDQLMKFEHFGSIQAFRLKY 563
>01_01_0994 -
7861310-7862119,7862378-7862498,7862718-7862901,
7862975-7863070,7863428-7863476,7863555-7863596,
7863684-7863836,7865631-7865705,7866462-7866587
Length = 551
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 410 SPEPQAEEVLQPKLPYRPQMRLLSRTRKKTS 502
+P PQ+ L PK+P P+ L K+TS
Sbjct: 408 TPGPQSATELDPKIPQTPRPNLKEAGEKRTS 438
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,702,081
Number of Sequences: 37544
Number of extensions: 421305
Number of successful extensions: 2035
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2008
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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