Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20858
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31) 65 6e-11
SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32) 59 4e-09
SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34) 56 2e-08
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 50 2e-06
SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 50 2e-06
SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24) 46 4e-05
SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08) 46 4e-05
SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26) 45 5e-05
SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28) 43 2e-04
SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 37 0.013
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22) 35 0.069
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) 31 0.85
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031) 30 1.5
SB_45755| Best HMM Match : GPW_gp25 (HMM E-Value=0.47) 30 2.0
SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08) 30 2.0
SB_51106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31) 29 2.6
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 29 2.6
SB_58895| Best HMM Match : SRCR (HMM E-Value=0) 29 3.4
SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05) 29 3.4
SB_19940| Best HMM Match : Drf_FH1 (HMM E-Value=0.97) 29 3.4
SB_6181| Best HMM Match : Biotin_lipoyl (HMM E-Value=4.2) 29 3.4
SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84) 29 4.5
SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09) 29 4.5
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 29 4.5
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 29 4.5
SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22) 29 4.5
SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 4.5
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 28 6.0
SB_56923| Best HMM Match : PT (HMM E-Value=0.95) 28 6.0
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 28 7.9
SB_17591| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_11668| Best HMM Match : rve (HMM E-Value=6.2e-14) 28 7.9
SB_7049| Best HMM Match : TF_Otx (HMM E-Value=1.6) 28 7.9
SB_5544| Best HMM Match : APG9 (HMM E-Value=7e-09) 28 7.9
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 28 7.9
SB_29293| Best HMM Match : Ant_C (HMM E-Value=2.2) 28 7.9
SB_23496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_17894| Best HMM Match : UPF0005 (HMM E-Value=0.00021) 28 7.9
SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31)
Length = 367
Score = 64.9 bits (151), Expect = 6e-11
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+K A+ENP LHNA++SK+LGK W LT +D+RPFVE+AER
Sbjct: 110 RKFAEENPKLHNAEISKLLGKAWNELTTKDKRPFVEKAER 149
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQNKARPNQ 203
LR+ HM EHPNY+Y P+RR + R Q
Sbjct: 150 LRIRHMKEHPNYRYTPKRRGRQDRRNGQ 177
>SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 62.5 bits (145), Expect = 3e-10
Identities = 23/40 (57%), Positives = 36/40 (90%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+K+A+E+PD+HNA++SK LGK+W+ L+ ++RPFVEE+ER
Sbjct: 61 RKMAEEHPDMHNAEISKRLGKRWKLLSESEKRPFVEESER 100
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +3
Query: 111 SGALRVIHMTEHPNYKYRPRRRKQ-NKARP 197
S LR+ HM +P+YKYRPR++KQ KA+P
Sbjct: 98 SERLRIRHMQAYPDYKYRPRKKKQPAKAKP 127
>SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
++LAD NP+LHNA+LSKMLG WR+L +RPFV+EAER
Sbjct: 382 RRLADANPELHNAELSKMLGLTWRALNSTQKRPFVDEAER 421
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQNK 188
LR+ HM ++PNYKYRPRRRK +K
Sbjct: 422 LRLQHMQDYPNYKYRPRRRKHSK 444
>SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32)
Length = 398
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+KLAD+ P LHNA+LSK LGK W+ L +++PF+EEAER
Sbjct: 80 RKLADQYPHLHNAELSKTLGKLWKLLNDSEKKPFIEEAER 119
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQ 182
LR+ H EHP+YKY+PRR+KQ
Sbjct: 120 LRIKHKREHPDYKYQPRRKKQ 140
>SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 56.4 bits (130), Expect = 2e-08
Identities = 20/40 (50%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+K+A ENP +HN+++SK LG +W+ L D++PFVEEA++
Sbjct: 343 RKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAKK 382
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQN 185
LR HM EHP+YKYRPRR+ ++
Sbjct: 383 LRAQHMKEHPDYKYRPRRKPKS 404
>SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34)
Length = 179
Score = 56.4 bits (130), Expect = 2e-08
Identities = 20/40 (50%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+K+A ENP +HN+++SK LG +W+ L D++PFVEEA++
Sbjct: 26 RKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAKK 65
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQN 185
LR HM EHP+YKYRPRR+ ++
Sbjct: 66 LRAQHMKEHPDYKYRPRRKPKS 87
>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 55.6 bits (128), Expect = 3e-08
Identities = 22/42 (52%), Positives = 34/42 (80%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAERCE 126
+KLA++ P +HNA+LSKMLGK WR L+ +++P+V+EA R +
Sbjct: 127 RKLAEQYPHVHNAELSKMLGKLWRMLSAAEKQPYVDEAARLD 168
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 132 HMTEHPNYKYRPRRRKQNKARP-NQXXXXXXXXXXXXXXXXXRTRQAPTRRTLASPTTPE 308
H +HP+YKYRPRRR+++ R Q +T+ T + SP TP
Sbjct: 171 HKEDHPDYKYRPRRRQKSLKRAYGQPPRVVTNWAIQHAQDHFKTQVNGTTAPITSPNTPT 230
Query: 309 P-DSHLTEPRLLPRTTKQTSSSTVTF 383
+ + LP+T T++ T+T+
Sbjct: 231 VLTQQVNTAQALPQTV-NTAAGTLTY 255
>SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 54.4 bits (125), Expect = 8e-08
Identities = 18/40 (45%), Positives = 33/40 (82%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+K+A +NP +HN+++SK LG +W+ L+ Q++RP+++EA R
Sbjct: 805 RKMAQDNPKMHNSEISKRLGSEWKLLSEQEKRPYIDEARR 844
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQ 182
LR +HM EHP+YKYRPRR+ +
Sbjct: 845 LRAVHMKEHPDYKYRPRRKSK 865
>SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 267
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAE 117
++LA ENP LHN+ +SKMLG +WR LT ++++ F EA+
Sbjct: 23 RQLAAENPKLHNSQISKMLGTEWRKLTVEEKQKFFAEAK 61
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQNKA 191
L +HM EHP+YKYRPRRR + ++
Sbjct: 63 LNELHMIEHPDYKYRPRRRVKKRS 86
>SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 494
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAE 117
++LA ENP LHN+ +SKMLG +WR LT ++++ F EA+
Sbjct: 23 RQLAAENPKLHNSQISKMLGTEWRKLTVEEKQKFFAEAK 61
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQNKA 191
L +HM EHP+YKYRPRRR + ++
Sbjct: 63 LNELHMIEHPDYKYRPRRRVKKRS 86
>SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/40 (45%), Positives = 32/40 (80%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+++A+E P + N+++SK LG +W SLT +++P+VEEA+R
Sbjct: 24 RRIAEECPRMLNSEISKRLGLEWNSLTLDEKQPYVEEAKR 63
Score = 32.3 bits (70), Expect = 0.37
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQNKAR 194
LR +H +HP+YKY+P+R+ + +
Sbjct: 64 LRELHKKDHPDYKYQPKRKPKTSPK 88
>SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24)
Length = 201
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+KLA + P++ N ++SK+LG +W L+ +++RPFV EA+R
Sbjct: 25 RKLALKYPNMLNCEISKLLGAEWSRLSEEEKRPFVTEAKR 64
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQNKAR 194
LR IH ++P+Y Y+PRRRK +
Sbjct: 65 LRTIHNQKYPDYSYKPRRRKSKTVK 89
>SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08)
Length = 271
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAERCE 126
K A NP +HN++ SK LG +W+ LT +++ PF+ E +R +
Sbjct: 25 KHYASINPGMHNSEFSKSLGPEWKMLTSEEKDPFIAEPKRLQ 66
>SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)
Length = 245
Score = 45.2 bits (102), Expect = 5e-05
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +1
Query: 7 LADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+A+ENP +HN D+S+ LG +W+ LT +++ + EEA++
Sbjct: 37 IANENPQMHNFDISRKLGLEWQKLTEEEKAYYFEEAKK 74
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQNKARPNQXXXXXXXXXXXXXXXXXRTRQAPTRRTLASPT 299
L+ H +P+YKY+PR+R + R + PT +
Sbjct: 75 LKEEHKERYPHYKYQPRKRDKTNKRGKMFHGSPFHFGFFPPSAPFYEGRFPTYALPSESR 134
Query: 300 TPEPDSHLTEPRLLPRTTKQ-TSSST 374
P P P P T ++ T++ST
Sbjct: 135 LPYPHLETPVPMAEPLTREEATATST 160
>SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 44.0 bits (99), Expect = 1e-04
Identities = 15/38 (39%), Positives = 29/38 (76%)
Frame = +1
Query: 4 KLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAE 117
++ ENP ++NA LSK+LG W+ L+ +++ P++E+A+
Sbjct: 25 QILQENPGINNARLSKLLGMAWKKLSVEEKEPYIEKAK 62
Score = 33.1 bits (72), Expect = 0.21
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRKQNKAR 194
L +H +HP+YKY+P+RRK ++
Sbjct: 64 LTEMHKEKHPDYKYQPKRRKSKSSK 88
>SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28)
Length = 245
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 16 ENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
ENP + NA++SK+LG +WR + ++ P+ EEA R
Sbjct: 31 ENPKMRNAEISKILGDEWRKMPESEKLPYTEEALR 65
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRR 176
LR H +HPNY+Y+PRR+
Sbjct: 66 LRRQHKVDHPNYRYKPRRK 84
>SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 39.5 bits (88), Expect = 0.002
Identities = 12/40 (30%), Positives = 31/40 (77%)
Frame = +1
Query: 10 ADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAERCES 129
+ E P +HN+++SK+LG +W+++ + ++P++E+A+ ++
Sbjct: 28 SQECPRMHNSEISKILGCEWKAMKDELKQPYIEKAKELQA 67
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 120 LRVIHMTEHPNYKYRPRRRK 179
L+ H E+P YKY+PRRRK
Sbjct: 65 LQAQHSRENPGYKYKPRRRK 84
>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/34 (41%), Positives = 27/34 (79%)
Frame = +1
Query: 16 ENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAE 117
++P L +++KMLG++W SL P++++ F++EAE
Sbjct: 218 QHPHLTFPEITKMLGQEWNSLLPEEKQKFLDEAE 251
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+K+ ENPDL +++++LG W L ++ F+EEAE+
Sbjct: 193 EKVRSENPDLPFHEVTRILGNMWSQLPTPQKQLFLEEAEK 232
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/46 (32%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER-CESYI 135
+K+ E+P+L +++K+LG +W ++ D++ ++++AER E YI
Sbjct: 160 EKVRSEHPELPFPEVTKILGAEWSKMSQDDKQRYLDDAERDKERYI 205
>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 34.7 bits (76), Expect = 0.069
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 7 LADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+A P +NA++S LG+ W L+ + ++P+ +EA R
Sbjct: 119 IAKRYPQANNAEISIRLGEIWNDLSSEQQKPYFDEATR 156
>SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22)
Length = 299
Score = 34.7 bits (76), Expect = 0.069
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 4 KLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAE 117
KLA + P+L + +L+ L KKWR ++ + ++ + E+ E
Sbjct: 169 KLAKKYPNLKSTELAAKLSKKWRKMSEERKKAYTEQYE 206
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEE 111
K L NPD+ L K L +KW+ + + ++ ++++
Sbjct: 243 KDLLVSNPDISAKKLKKKLKRKWKEIDEKGKKTWIKK 279
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 34.3 bits (75), Expect = 0.091
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Frame = +2
Query: 98 RSSRKRSA--ASHTYDRAS*LQVQT*TAKAKQGQTQPTCHASQRPFLCLCRFRIAYATGT 271
RS +R++ +S + DR S ++++ A+++ + S+ L + ++ T
Sbjct: 660 RSPPRRTSRWSSQSPDRRSPARIKSSPARSRSRSQSASPRHSKSKSPALSKVQVKTEKKT 719
Query: 272 DSPDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQPKL 451
SP G+ P S S+Y+ + V+ P SP+ SPE + E+ +
Sbjct: 720 PSPPP-IKKTIGSASPP--PSHHRSEYKKRDVQDSPVRQPSLSPSPSPERKKEDPKEKSP 776
Query: 452 PYRPQMRLLSRT-RKKTSSTGEAKDFEP 532
P ++ +R+ RK SS E+ P
Sbjct: 777 PLPKSKKMANRSYRKHNSSESESDSDSP 804
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 269 TDSPDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSP-EPQAEEVLQP 445
TD P + S G SPL D + TP S +++P PQ + + P
Sbjct: 2592 TDRPRSAESRPSSYGVRGVTLSPLPLDQEPRPSDKQQAYTPPSESSKAPRSPQIRDAITP 2651
Query: 446 KLPYRPQMRL-LSRTRKKTSSTGEAKDFEPFV 538
+ P R S +TS A++ +P V
Sbjct: 2652 REPVSASDRTSTSEPSGRTSVGAPARERDPSV 2683
>SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEA 114
+KL E AD SK+ +KW++++ +++ FV++A
Sbjct: 28 EKLQREEGKFSLADFSKVSAEKWKNMSEEEKETFVQKA 65
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 16 ENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAER 120
+NP+ LSK+LG+ W +T D+ + + A++
Sbjct: 123 DNPNASGGALSKVLGEMWSKMTDDDKTQYQDMAKK 157
>SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)
Length = 1204
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 299 NPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQP 445
+PG SP R P T Q + Q+P SP +P PQA QP
Sbjct: 436 SPGHANSP-RPIPQFPSNPTGMQTSSMPQSPVRSPMNAPSPQAARTPQP 483
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +2
Query: 326 RTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKKTSS 505
R + L +D NQ+ ++ T + +R+ P + + R Q R + T TSS
Sbjct: 723 RMTTLIADESRNQRRYIYMTTRTAGKSRNRRPYIPMATRTAVESRNQRRCIHMT---TSS 779
Query: 506 TGEAKDFEPFVDIRHVFSVQIIQARSY 586
TG++++ P++ + +V+ R Y
Sbjct: 780 TGKSRNRRPYIPMATRTAVESRNQRRY 806
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +2
Query: 359 NQQFNGHVQTPESSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKDFEPFV 538
NQ+ H+ T + +R+ P + + R Q R + T TS+TG++++ P++
Sbjct: 768 NQRRCIHMTTSSTGKSRNRRPYIPMATRTAVESRNQRRYIHMT---TSTTGKSRNRRPYI 824
Query: 539 DIRHVFSVQIIQARSY 586
+ +V+ R Y
Sbjct: 825 PLATRTAVESRNQRRY 840
>SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031)
Length = 406
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = +1
Query: 4 KLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAE 117
++ +ENPD+ + D+ K+ K W+ L +++ + E+A+
Sbjct: 346 QIEEENPDIPDEDVVKIAMKTWKGLDSVEKKVWNEKAK 383
>SB_45755| Best HMM Match : GPW_gp25 (HMM E-Value=0.47)
Length = 624
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +2
Query: 266 GTDSPDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQP 445
GT S DTR H P P A + +NQ ++ P+ S + P A +P
Sbjct: 381 GTASADTRCQHEVAVADPPVVCPPKACHFFSNQVVAPEMEGPQRSTSAQPAGTANGSAEP 440
>SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08)
Length = 324
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 4 KLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEA 114
++ ++NPD D+ K++G+ WR L +++ EA
Sbjct: 45 QVKNQNPDFKLWDIGKIIGQMWRDLDDAEKQQEYNEA 81
>SB_51106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 568
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 266 GTDSPDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSP 415
GT S DTR H P P A + +NQ ++ P+ S + P
Sbjct: 236 GTASTDTRCQHEVAVADPPVVCPPKACHFFSNQVVASQMEGPQGSTSAQP 285
>SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31)
Length = 690
Score = 29.5 bits (63), Expect = 2.6
Identities = 8/26 (30%), Positives = 20/26 (76%)
Frame = +1
Query: 40 DLSKMLGKKWRSLTPQDRRPFVEEAE 117
+++K+ G++W+ L + ++P+V +AE
Sbjct: 530 EVAKLAGEEWKKLNDEQKKPYVAKAE 555
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/31 (29%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 43 LSKMLGKKWRSLTPQDRRPF-VEEAERCESY 132
+ + G++WR ++ +D++P+ ++EAE Y
Sbjct: 606 IPSLAGERWREMSDEDKKPYTIQEAEERNKY 636
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/31 (29%), Positives = 22/31 (70%)
Frame = +1
Query: 1 KKLADENPDLHNADLSKMLGKKWRSLTPQDR 93
+++ D+NP + ++SK+ G+ W++LT + +
Sbjct: 558 QEIKDKNPGISVTEVSKVAGEMWKNLTDKSK 588
>SB_58895| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1838
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 279 RTLASPTTPEPDSHLTEPRLLPRTTKQTSSST 374
R +SPTT + S T + +PR T+ T+S T
Sbjct: 1065 RVTSSPTTVKATSRSTRTKFVPRITRVTASPT 1096
>SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05)
Length = 1081
Score = 29.1 bits (62), Expect = 3.4
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 14/99 (14%)
Frame = +2
Query: 266 GTDSPDTRFSHNPGAGFSPY-----RTSPLASDYQTNQQFNGHVQTPESSPA----RSPE 418
GT S DTRF H SP + A QTNQ ++ P+ S + P+
Sbjct: 582 GTASADTRFQHELAVADSPVVCPQKHSGESAIPEQTNQVVASQMEEPQGSTSAQHLAEPD 641
Query: 419 PQAEE--VLQP-KLP--YRPQMRLLSRTRKKTSSTGEAK 520
QA E +P + P +R + R + R ++ GE+K
Sbjct: 642 KQAAEQAAHEPARTPRRWRRESRAPNHPRPDLNTLGESK 680
>SB_19940| Best HMM Match : Drf_FH1 (HMM E-Value=0.97)
Length = 494
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 266 GTDSPDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQP 445
GT S T S +PG +P T A+ +NQ +Q P S+ +P P
Sbjct: 324 GTASTVTMVSPSPGPHVTPVTTPSAAAPVSSNQPVVKIIQVPGSAGLSISKPVVVMTAGP 383
Query: 446 KLPYRPQMRLLSRTRK 493
P P + + T K
Sbjct: 384 SKPSVPGVLSTNVTSK 399
>SB_6181| Best HMM Match : Biotin_lipoyl (HMM E-Value=4.2)
Length = 86
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 266 GTDSPDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQP 445
GT S T S +PG +P T A+ +NQ +Q P S+ +P P
Sbjct: 2 GTASTVTMVSPSPGPHVTPVTTPSAAAPVSSNQPVVKIIQVPGSAGLSISKPVVVMTAGP 61
Query: 446 KLPYRPQMRLLSRTRK 493
P P + + T K
Sbjct: 62 SKPSVPGVLSTNVTSK 77
>SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84)
Length = 649
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 380 VQTPESSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGE 514
+Q S + SP P ++ +P+ P + ++T+ KTSS+GE
Sbjct: 509 IQKMTSIKSYSPAPYKQQESKPQRPSPSPTSIDAKTKVKTSSSGE 553
>SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09)
Length = 820
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 279 RTLASPTTPEPDSHLTEPRLLPRT 350
RTL P P P HLT P P T
Sbjct: 475 RTLLHPNAPAPTDHLTAPTFQPLT 498
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 377 HVQTPESSP--ARSPEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKDFEP 532
H TP SSP A +P P+ L R Q L RT S+TG+++ P
Sbjct: 39 HSPTPRSSPPKAATPSPKITRSWSSPLFNRRQAHALPRT--SVSNTGQSRQLPP 90
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 446 KLPYRPQMRLLSRTRKKTSST-GEAKDFEPFVDIRHVFS 559
K+PY ++R S + K +SST KD+ DI HV +
Sbjct: 976 KIPYNNRVRSQSLSEKSSSSTVAMGKDYFEQADINHVIA 1014
>SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = +2
Query: 263 TGTDSPDTRFSHNPGAGFSPYRTSPLASDYQTNQQFNGHVQTPESSPARSPEPQAEEVLQ 442
+ TD+P H SP PL+ + ++ + H E S R ++
Sbjct: 509 SATDTPSDDKPHQDLVPTSPPPAKPLSDRVEKWERISNHGLDQERSSMRLSSELEDDAFL 568
Query: 443 PKLPYRPQMR--LLSRTRKKTSSTGEAKD 523
P L R Q +L+RT+++ S D
Sbjct: 569 PSLSDRRQSAEDILARTKERRKSDNLTTD 597
>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
Length = 595
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 400 SGKVSGAASRRSTPAEAP-LPTPDAS 474
SG S ++SRRS+P+ +P +PTP S
Sbjct: 474 SGSSSSSSSRRSSPSGSPAIPTPSGS 499
>SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 858
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 430 RSTPAEAPLPTPDASPVENEKE 495
RSTP+ PL TP A+P E ++E
Sbjct: 9 RSTPSATPLATPMATPPEFDRE 30
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 373 RSRSNAGIVSGKVSGAASRRSTPAEAPLPTPDASPV 480
RS SN+ S K S S RS+P +P +P +SPV
Sbjct: 334 RSPSNSPRPSPKNSPRTSPRSSPFASPTGSPTSSPV 369
>SB_56923| Best HMM Match : PT (HMM E-Value=0.95)
Length = 441
Score = 28.3 bits (60), Expect = 6.0
Identities = 33/121 (27%), Positives = 44/121 (36%), Gaps = 6/121 (4%)
Frame = +1
Query: 139 PSILTTSTDLDGESKTRPDPTNLPRQSAXXXXXXXXXDRVRDRHRLAGHSLLPQPRSRIL 318
P ++ S D + + + PD N Q A D LA L S
Sbjct: 256 PELMLLSQDFNTDLNSFPDFVNGLGQLAMEDVPFEDLPTFEDAMALAQECLSTPTESTSS 315
Query: 319 TLQNLASCLGLPNK--PAVQ----RSRSNAGIVSGKVSGAASRRSTPAEAPLPTPDASPV 480
S + P + P VQ S+AG S S S + + A LPTPD SP+
Sbjct: 316 MTSPCGSQMSYPARSPPHVQCDPFSPTSSAGHPSPFPSPIGSHGPSISPAGLPTPDPSPL 375
Query: 481 E 483
E
Sbjct: 376 E 376
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 355 NKPAVQRS-RSNAGIVSGKVSGAASRRSTPAEAPLPTPDASPVENEKE 495
NKP R+ R A I+S + R + E P+P +SPV NE++
Sbjct: 298 NKPTASRTARPPATILSKPIPARNRREDSDGE---PSPPSSPVSNEED 342
>SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 403
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +2
Query: 362 QQFNGHVQTPESSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKDFEPFVD 541
++F+G + P + E +A P PY+P R+ + + + ++PF
Sbjct: 41 ERFHGLILLRHHDPLKFTEEEAS----PSYPYKPLPRIPTSLSLVSLQASPSYPYKPFPR 96
Query: 542 IRHVFSVQIIQAR-SYSQPPWPQLVWPTAVRHVHTEDAHGEP 664
I S+ +QA SY P P++ PT++ + + + P
Sbjct: 97 ITTSPSLVHLQASPSYPYKPLPRI--PTSLSLISLQASPSYP 136
>SB_17591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 567
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 413 PEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKD 523
P+ +L+P +P + + ++L R KK ++TG KD
Sbjct: 34 PDDVKHRLLKPLVPAKTRGKILERFDKKLATTGCTKD 70
>SB_11668| Best HMM Match : rve (HMM E-Value=6.2e-14)
Length = 597
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 323 YRTSPLASDYQTNQQFNG-HVQTPESSPARSPEPQAEEVLQPKLPYRPQMRLLSRTRKK 496
YR +PL+ Y ++ NG ++TP SP QA+ Q K + RL R ++
Sbjct: 399 YRRTPLSCGYSPSELLNGRQIRTPLDILVPSPAHQAQG-RQDKQAVKAAQRLAGRQDRR 456
>SB_7049| Best HMM Match : TF_Otx (HMM E-Value=1.6)
Length = 235
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 316 LTLQNLASCLGLPNKPAVQRSRSNAGIVSGKVSGAASRRSTPAEAPLPTPDASP 477
LT+ +S +G ++PA + A S VSG ++R +PA P+ SP
Sbjct: 13 LTVTMKSSFIGSTSEPAQEAQERKAS--SQPVSGVSTRTQSPASTGNPSEPQSP 64
>SB_5544| Best HMM Match : APG9 (HMM E-Value=7e-09)
Length = 1288
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 274 LAGHSLLPQPRSRILTLQNLAS--CL-GLPNKPAVQRSRSNAGIVSGKVSGAASRRS 435
+AG L +P S LQ+ S CL GLP +PA+ S AG+ G V A +RRS
Sbjct: 1112 IAGSVTLSEPCS----LQDFRSFDCLPGLPYEPAMATSDPTAGL-QGGVKAADTRRS 1163
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 259 RDRHRLAGHSLLPQPRSRILTLQNLASCLGLPNKPAVQRSRSNAGIVSGKVSGAASRR 432
+ RHR + P+ RSR +N G P QRSRS + + SG+ S RR
Sbjct: 192 KHRHRDSSSPSPPRHRSRS-PFRNGNKRKGFPTHRNKQRSRSVSPVQSGQASQVMKRR 248
>SB_29293| Best HMM Match : Ant_C (HMM E-Value=2.2)
Length = 759
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 412 SGAASRRSTPAEAPLPTPDASPV 480
SGA R T EA P+PD SPV
Sbjct: 578 SGAMYRTRTSPEAQRPSPDTSPV 600
>SB_23496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 504
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 413 PEPQAEEVLQPKLPYRPQMRLLSRTRKKTSSTGEAKDFEPFVDIRHVFS 559
P+ E + P+L YRPQ L TR ++ E D V RHV +
Sbjct: 358 PKQSLESMRAPELAYRPQKDRLGTTRADSNRLLET-DTPVAVHCRHVMA 405
>SB_17894| Best HMM Match : UPF0005 (HMM E-Value=0.00021)
Length = 344
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 244 AAEAEEGALTGVAGWLGLALFCFRRLGL 161
AAE AL G AG +GL C+ LGL
Sbjct: 108 AAETTGRALVGGAGLVGLGALCYYGLGL 135
>SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 452 PYRPQMRLLSRTRKKTSSTGEAKDFEPFVDIRHVFSVQIIQARSYSQPP 598
P RPQ + KK S E F P DIR V ++ ++Y +PP
Sbjct: 652 PLRPQSSPAKVSFKKAGSEVEETPFNPDSDIRERIHVTEVR-QTYPRPP 699
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,837,140
Number of Sequences: 59808
Number of extensions: 445921
Number of successful extensions: 1864
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1853
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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