Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20857
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U39471-1|AAA80132.4|  461|Caenorhabditis elegans Intestinal acid...    28   7.8  

>U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical
           protein C24A8.1 protein.
          Length = 582

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 392 HIKQFLCIIYCTQDIFVFTTNKNHFILYSMNYFV 291
           H+  F+C  YC  D+   T++  H +L S++  V
Sbjct: 56  HLPLFVCYFYCVLDVAASTSSIIHLVLISIDRLV 89


>U39471-1|AAA80132.4|  461|Caenorhabditis elegans Intestinal acid
           phosphatase protein4 protein.
          Length = 461

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 383 QFLCIIYCTQDIFVFTTNKNHFILYSMNYFVRCV 282
           +FL   Y  Q+IFV +T+KN  +L + +  V C+
Sbjct: 93  KFLNTRYNQQEIFVRSTDKNRTLLSAFSNMVECM 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,931,883
Number of Sequences: 27780
Number of extensions: 321944
Number of successful extensions: 734
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)