Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20856
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4WCV0 Cluster: Eukaryotic translation initiation facto... 101 2e-20
UniRef50_Q7RN51 Cluster: Eukaryotic translation initiation facto... 100 7e-20
UniRef50_P47813 Cluster: Eukaryotic translation initiation facto... 93 8e-18
UniRef50_UPI0000DD8698 Cluster: PREDICTED: similar to Eukaryotic... 87 5e-16
UniRef50_A7QB05 Cluster: Chromosome chr5 scaffold_72, whole geno... 83 5e-15
UniRef50_UPI0000498CC1 Cluster: translation initiation factor eI... 76 7e-13
UniRef50_Q9AW58 Cluster: Eukaryotic translation initiation facto... 73 7e-12
UniRef50_Q7RN52 Cluster: Putative uncharacterized protein PY0197... 70 6e-11
UniRef50_A0EIP4 Cluster: Chromosome undetermined scaffold_99, wh... 60 4e-08
UniRef50_Q22Y66 Cluster: Eukaryotic initiation factor 1A family ... 58 2e-07
UniRef50_Q3LWE9 Cluster: Translation elongation initiation facto... 52 1e-05
UniRef50_UPI00015BAF11 Cluster: translation initiation factor 1A... 50 5e-05
UniRef50_A2F1G9 Cluster: Eukaryotic initiation factor 1A family ... 50 5e-05
UniRef50_A4QTW8 Cluster: Eukaryotic translation initiation facto... 50 7e-05
UniRef50_Q97W62 Cluster: Translation initiation factor 1A; n=5; ... 49 9e-05
UniRef50_Q7R1J4 Cluster: GLP_38_12700_12218; n=1; Giardia lambli... 48 2e-04
UniRef50_A3DNJ1 Cluster: S1, IF1 family protein; n=1; Staphyloth... 46 0.001
UniRef50_A2BML2 Cluster: Translation initiation factor 1A; n=1; ... 46 0.001
UniRef50_A3H791 Cluster: S1, IF1 type; n=1; Caldivirga maquiling... 44 0.004
UniRef50_A3MTZ0 Cluster: S1, IF1 family protein; n=2; Pyrobaculu... 44 0.005
UniRef50_Q8TXZ3 Cluster: Translation initiation factor 1A; n=4; ... 44 0.005
UniRef50_Q5UZM2 Cluster: Translation initiation factor 1A; n=4; ... 44 0.005
UniRef50_Q979F7 Cluster: Translation initiation factor 1A; n=6; ... 43 0.006
UniRef50_A1RXA3 Cluster: Translation initiation factor eIF-1A; n... 43 0.008
UniRef50_Q8TSA3 Cluster: Translation initiation factor 1A 1; n=1... 43 0.008
UniRef50_Q9HN64 Cluster: Translation initiation factor 1A 1; n=8... 43 0.008
UniRef50_Q4QF06 Cluster: Eukaryotic translation initiation facto... 42 0.014
UniRef50_O29481 Cluster: Translation initiation factor 1A; n=4; ... 42 0.014
UniRef50_Q9DFP1 Cluster: Eukaryotic translation initiation facto... 41 0.033
UniRef50_Q8ZXV9 Cluster: Translation initiation factor 1A; n=3; ... 40 0.044
UniRef50_Q2FSC8 Cluster: Translation initiation factor eIF-1A; n... 40 0.058
UniRef50_Q0W7X8 Cluster: Translation initiation factor 1A; n=2; ... 40 0.058
UniRef50_P57676 Cluster: Translation initiation factor 1A; n=1; ... 39 0.10
UniRef50_Q9BSC1 Cluster: MGC11102 protein; n=20; Coelomata|Rep: ... 39 0.13
UniRef50_A7I5X8 Cluster: Translation initiation factor eIF-1A; n... 39 0.13
UniRef50_Q1M2Y3 Cluster: Translation initiation factor eIF-1A-li... 38 0.31
UniRef50_Q8SS25 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTO... 36 0.94
UniRef50_UPI0000D55DC6 Cluster: PREDICTED: similar to CG3106-PA;... 34 3.8
UniRef50_A0RVP5 Cluster: Translation initiation factor 1; n=4; A... 34 3.8
UniRef50_A0DSZ4 Cluster: Chromosome undetermined scaffold_62, wh... 33 5.0
UniRef50_Q6LZM1 Cluster: Translation initiation factor 1A; n=6; ... 33 5.0
UniRef50_Q1HQA3 Cluster: Translation initiation factor 1a; n=3; ... 33 6.6
UniRef50_Q179M7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
>UniRef50_Q4WCV0 Cluster: Eukaryotic translation initiation factor
eIF-1A subunit, putative; n=10; Fungi/Metazoa group|Rep:
Eukaryotic translation initiation factor eIF-1A subunit,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 177
Score = 101 bits (242), Expect = 2e-20
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = +2
Query: 233 VSHPR-ETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINE 409
++H R + RKKVWINQGDIIL+ LRDYQD K DVI+KYT DEAR+LK YG PE +INE
Sbjct: 86 LAHIRGKLRKKVWINQGDIILLSLRDYQDEKGDVIMKYTADEARSLKAYGELPEHAKINE 145
Query: 410 TVVYSVDGLDEDIEF 454
T Y +G ++++EF
Sbjct: 146 TDTYGHEGFEDNVEF 160
Score = 83.4 bits (197), Expect = 5e-15
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +3
Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
LVFKE+GQEYAQV KMLGNGRLEAMCFDG KRL HIRGKL KK
Sbjct: 54 LVFKEEGQEYAQVVKMLGNGRLEAMCFDGEKRLAHIRGKLRKK 96
>UniRef50_Q7RN51 Cluster: Eukaryotic translation initiation factor
1a; n=1; Plasmodium yoelii yoelii|Rep: Eukaryotic
translation initiation factor 1a - Plasmodium yoelii
yoelii
Length = 124
Score = 99.5 bits (237), Expect = 7e-20
Identities = 45/72 (62%), Positives = 55/72 (76%)
Frame = +2
Query: 239 HPRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVV 418
H + RK+VWIN GDIIL+ LRDYQD+KADVI KYTPDEAR+LK +G PET +INET +
Sbjct: 8 HRGKMRKRVWINSGDIILVSLRDYQDSKADVIAKYTPDEARSLKAHGELPETAKINETDI 67
Query: 419 YSVDGLDEDIEF 454
+ DG +EF
Sbjct: 68 FDDDG-QHGVEF 78
>UniRef50_P47813 Cluster: Eukaryotic translation initiation factor
1A, X-chromosomal; n=129; Eukaryota|Rep: Eukaryotic
translation initiation factor 1A, X-chromosomal - Homo
sapiens (Human)
Length = 144
Score = 92.7 bits (220), Expect = 8e-18
Identities = 44/67 (65%), Positives = 51/67 (76%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDG 433
RKKVWIN DIIL+GLRDYQD KADVILKY DEAR+LK YG PE +INET + G
Sbjct: 66 RKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFG-PG 124
Query: 434 LDEDIEF 454
D++I+F
Sbjct: 125 DDDEIQF 131
Score = 90.6 bits (215), Expect = 3e-17
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +3
Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
LVFKEDGQEYAQV KMLGNGRLEAMCFDG+KRLCHIRGKL KK
Sbjct: 26 LVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68
>UniRef50_UPI0000DD8698 Cluster: PREDICTED: similar to Eukaryotic
translation initiation factor 1A (eIF-1A) (eIF-4C)
(Liver regeneration-related protein LRRG048); n=1; Homo
sapiens|Rep: PREDICTED: similar to Eukaryotic
translation initiation factor 1A (eIF-1A) (eIF-4C)
(Liver regeneration-related protein LRRG048) - Homo
sapiens
Length = 118
Score = 86.6 bits (205), Expect = 5e-16
Identities = 41/64 (64%), Positives = 48/64 (75%)
Frame = +2
Query: 263 VWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDGLDE 442
VWIN DIIL+GLRDYQD KADVILKY DEAR+LK YG PE +INET + G D+
Sbjct: 43 VWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFG-PGDDD 101
Query: 443 DIEF 454
+I+F
Sbjct: 102 EIQF 105
>UniRef50_A7QB05 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 310
Score = 83.4 bits (197), Expect = 5e-15
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +2
Query: 257 KKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDGL 436
KKVWI GDIIL+ L DYQD KADVILKY PDEAR LK YG PE R+NE + GL
Sbjct: 67 KKVWIAAGDIILVSLHDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGI---AGGL 123
Query: 437 DE 442
DE
Sbjct: 124 DE 125
Score = 82.6 bits (195), Expect = 8e-15
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3
Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
LVFKEDGQEYAQV +MLGNGR EAMC DG KRLCHIRGK+ KK
Sbjct: 26 LVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKK 68
>UniRef50_UPI0000498CC1 Cluster: translation initiation factor
eIF-1A; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
translation initiation factor eIF-1A - Entamoeba
histolytica HM-1:IMSS
Length = 171
Score = 76.2 bits (179), Expect = 7e-13
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
LVFKE+GQEY QVT+MLGNGRLEA CFDG R CHIRG++++K
Sbjct: 26 LVFKEEGQEYGQVTRMLGNGRLEAYCFDGKTRQCHIRGQMQRK 68
Score = 59.3 bits (137), Expect = 9e-08
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +2
Query: 248 ETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPE 391
+ ++KVWIN D+IL+ LR+Y+D KADVI KY DE LK Y P+
Sbjct: 64 QMQRKVWINVNDVILVSLREYEDGKADVIKKYNSDEIIQLKKYKEIPD 111
>UniRef50_Q9AW58 Cluster: Eukaryotic translation initiation factor
1A; n=1; Guillardia theta|Rep: Eukaryotic translation
initiation factor 1A - Guillardia theta (Cryptomonas
phi)
Length = 143
Score = 72.9 bits (171), Expect = 7e-12
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3
Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
L+FK++ QEY QV KMLGNGR + CFDGI+RLCHIRGK+ KK
Sbjct: 25 LIFKDNCQEYGQVIKMLGNGRCDTYCFDGIRRLCHIRGKMRKK 67
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPET 394
RKKVWIN GDI+L+ LRD+Q+ K D+I KY+PDE+R L+ +G P T
Sbjct: 65 RKKVWINTGDIVLVALRDFQNNKGDIIHKYSPDESRKLRAFGELPLT 111
>UniRef50_Q7RN52 Cluster: Putative uncharacterized protein PY01972;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY01972 - Plasmodium yoelii
yoelii
Length = 133
Score = 69.7 bits (163), Expect = 6e-11
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +3
Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIR 245
L++KE+ QEYAQV +MLGNGRLEA CFDG+KRLCHIR
Sbjct: 95 LLYKEEDQEYAQVLRMLGNGRLEAHCFDGVKRLCHIR 131
>UniRef50_A0EIP4 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_99, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETV 397
R+KVWI GDI+L+ LR++QD K DV+ KY P+E + LK PE +
Sbjct: 66 RRKVWIQNGDIVLVALREFQDEKCDVVYKYFPEEIKQLKNLKEIPENL 113
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +3
Query: 144 KEDGQEYAQVTKMLGNGRLEAMCF-DGIKRLCHIRGKLEKK 263
KEDGQ+YAQV K+LGNGRL +C D +RL HIRGK+ +K
Sbjct: 28 KEDGQDYAQVIKLLGNGRLICVCLGDSKQRLGHIRGKMRRK 68
>UniRef50_Q22Y66 Cluster: Eukaryotic initiation factor 1A family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Eukaryotic initiation factor 1A family protein -
Tetrahymena thermophila SB210
Length = 213
Score = 58.0 bits (134), Expect = 2e-07
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNL 367
R K+++N+GDI+L+GLRDYQD K D+ILKY +E R L
Sbjct: 66 RYKIYVNEGDIVLVGLRDYQDDKCDIILKYHKEETRQL 103
>UniRef50_Q3LWE9 Cluster: Translation elongation initiation factor
4C; n=1; Bigelowiella natans|Rep: Translation elongation
initiation factor 4C - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 124
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 379
RK VWI +GDIIL+ LR+Y D K DV+ +YT D+ +L G
Sbjct: 68 RKTVWIREGDIILVSLREYDDFKGDVLCRYTLDQINSLIASG 109
Score = 38.3 bits (85), Expect = 0.18
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 162 YAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEK 260
Y +V LG+ RL+ +C DG R+C IRGKL K
Sbjct: 37 YGKVIVSLGDCRLKVLCEDGKSRVCTIRGKLRK 69
>UniRef50_UPI00015BAF11 Cluster: translation initiation factor 1A
(aeIF-1A); n=1; Ignicoccus hospitalis KIN4/I|Rep:
translation initiation factor 1A (aeIF-1A) - Ignicoccus
hospitalis KIN4/I
Length = 132
Score = 50.0 bits (114), Expect = 5e-05
Identities = 19/52 (36%), Positives = 34/52 (65%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETV 397
P + R++VWI +GDI++ + D+Q KAD++ +Y+ DE + L G P+ +
Sbjct: 53 PGKLRRRVWIREGDIVIATVWDFQPKKADIVYRYSRDELKRLIVKGLLPKEI 104
>UniRef50_A2F1G9 Cluster: Eukaryotic initiation factor 1A family
protein; n=1; Trichomonas vaginalis G3|Rep: Eukaryotic
initiation factor 1A family protein - Trichomonas
vaginalis G3
Length = 139
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDG 433
R +++INQGD +LI LR+ +D KAD+I KYT DEA L G E +T + G
Sbjct: 64 RGRLFINQGDYLLIALREEEDDKADIIHKYTTDEAHELFKMGEVNERDFTTQTEESAQGG 123
Query: 434 LDEDI 448
D +
Sbjct: 124 DDNGV 128
Score = 39.9 bits (89), Expect = 0.058
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGK 251
L+ E+ Q Y QV + LG+ R E +C D R+C +RGK
Sbjct: 24 LILAEEMQVYGQVARSLGDKRFECICNDHKVRICKVRGK 62
>UniRef50_A4QTW8 Cluster: Eukaryotic translation initiation factor
1A-like protein; n=2; Magnaporthe grisea|Rep: Eukaryotic
translation initiation factor 1A-like protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 187
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDG 433
RKK W+ GD++L+ + + K ++ +Y DEAR +K P VRINET V +
Sbjct: 95 RKKQWVQAGDLVLMQVWPNERHKGSIVERYPSDEARKIKEEHELPSYVRINETDVGGENR 154
Query: 434 LDED 445
D+D
Sbjct: 155 DDDD 158
>UniRef50_Q97W62 Cluster: Translation initiation factor 1A; n=5;
Sulfolobaceae|Rep: Translation initiation factor 1A -
Sulfolobus solfataricus
Length = 108
Score = 49.2 bits (112), Expect = 9e-05
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNL 367
P + RKK+W+ +GD++L+G+ D+Q + D++ KY DE + L
Sbjct: 51 PGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
Score = 41.1 bits (92), Expect = 0.025
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 147 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
E+GQ V KMLG L +C DG +RL I GK+ KK
Sbjct: 19 EEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKK 57
>UniRef50_Q7R1J4 Cluster: GLP_38_12700_12218; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_38_12700_12218 - Giardia lamblia
ATCC 50803
Length = 160
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
LV+K + + Y TK+LG G C DGI+R CH+RG L+K+
Sbjct: 25 LVYKGESEVYGVCTKVLGCGYYTIYCLDGIRRRCHLRGALKKR 67
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDEARNLKTYGGFP---ETVRINETVVY 421
+++V ++ GD++L+ LR++ + AD++ KY PDE + LK YG + + E V+
Sbjct: 66 KRRVMMHAGDLVLVSLREFSTETDADIVHKYQPDEVKELKKYGEITVDLDEILDREVEVF 125
Query: 422 SVDGLD 439
VD D
Sbjct: 126 RVDQKD 131
>UniRef50_A3DNJ1 Cluster: S1, IF1 family protein; n=1;
Staphylothermus marinus F1|Rep: S1, IF1 family protein -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 111
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFP 388
P + R++VW+N+GDI+L+ + D+ + +VI KY+ E L G P
Sbjct: 52 PGKMRRRVWMNEGDIVLVAIWDFSPERGEVIHKYSRSEVTKLVERGVIP 100
>UniRef50_A2BML2 Cluster: Translation initiation factor 1A; n=1;
Hyperthermus butylicus DSM 5456|Rep: Translation
initiation factor 1A - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 84
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPE 391
P R++VWI +GDI+L D++ +ADV+ +Y+ +E R L G P+
Sbjct: 25 PGSMRRRVWIREGDIVLAAPWDFKPDRADVVYRYSREELRKLVEKGIVPQ 74
>UniRef50_A3H791 Cluster: S1, IF1 type; n=1; Caldivirga
maquilingensis IC-167|Rep: S1, IF1 type - Caldivirga
maquilingensis IC-167
Length = 102
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETV-RINE 409
P + RK++WI GD +++ D++ +KADV+ KY E L+ + E + R++E
Sbjct: 43 PGKYRKRMWIRIGDYLIVAPWDFEPSKADVVYKYEKGEVNELRRISKYSEVLNRLDE 99
>UniRef50_A3MTZ0 Cluster: S1, IF1 family protein; n=2;
Pyrobaculum|Rep: S1, IF1 family protein - Pyrobaculum
calidifontis (strain JCM 11548 / VA1)
Length = 99
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETV 397
P RKK+W+ GD +++ L D++ K D++ KY + LK GF E +
Sbjct: 42 PGRLRKKLWLKAGDYVIVALWDFEKDKGDIVHKYDKRDVEELKR-RGFAEAI 92
Score = 36.7 bits (81), Expect = 0.54
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 150 DGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
+G+ +V +MLG+GR +C DG R+ + G+L KK
Sbjct: 11 EGEVLGKVLEMLGDGRFRVICADGEIRVARLPGRLRKK 48
>UniRef50_Q8TXZ3 Cluster: Translation initiation factor 1A; n=4;
Euryarchaeota|Rep: Translation initiation factor 1A -
Methanopyrus kandleri
Length = 111
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETV 397
P + RK+VWI +GD++L+ ++Q +ADV +YT + LK G E V
Sbjct: 49 PGKMRKRVWIREGDVVLVKPWEFQPERADVTWRYTRVQVDWLKRKGKLDERV 100
Score = 39.5 bits (88), Expect = 0.076
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 147 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
++G+ + V KMLGN R++ C DG R+ I GK+ K+
Sbjct: 17 KEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKR 55
>UniRef50_Q5UZM2 Cluster: Translation initiation factor 1A; n=4;
Halobacteriaceae|Rep: Translation initiation factor 1A -
Haloarcula marismortui (Halobacterium marismortui)
Length = 95
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPE 391
P + +K++WI + D++L+ D+QD KAD+ +Y +A L+ G E
Sbjct: 46 PGKMQKRIWIREDDVVLVEPWDWQDEKADITWRYEKQDADQLREEGHIQE 95
Score = 38.3 bits (85), Expect = 0.18
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 147 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
E+ + +A V MLG R++ C DG++R I GK++K+
Sbjct: 14 EEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKR 52
>UniRef50_Q979F7 Cluster: Translation initiation factor 1A; n=6;
Euryarchaeota|Rep: Translation initiation factor 1A -
Thermoplasma volcanium
Length = 123
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRI 403
P RK++WI + D++++ ++Q KADV+ +YT +A L PE + I
Sbjct: 68 PGRMRKRMWIREKDLVIVKPWEFQPEKADVVYRYTKTQASYLSRNHMLPEVIDI 121
>UniRef50_A1RXA3 Cluster: Translation initiation factor eIF-1A; n=1;
Thermofilum pendens Hrk 5|Rep: Translation initiation
factor eIF-1A - Thermofilum pendens (strain Hrk 5)
Length = 105
Score = 42.7 bits (96), Expect = 0.008
Identities = 15/46 (32%), Positives = 30/46 (65%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 379
P + +K++W+ GD++L+ D+Q + D+I +YT +E + L+ G
Sbjct: 50 PGKFKKRMWMKVGDVVLVAPWDFQPERGDIIYRYTSNELQKLEKKG 95
>UniRef50_Q8TSA3 Cluster: Translation initiation factor 1A 1; n=13;
Euryarchaeota|Rep: Translation initiation factor 1A 1 -
Methanosarcina acetivorans
Length = 111
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 379
P +KK WI +GD++++ ++Q+ KADVI KYT + L+ G
Sbjct: 62 PGSMKKKTWIREGDVVIVVPWEFQNEKADVIWKYTRPQVDWLERKG 107
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 144 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
+E+ + A V +LG RL C DG+ R+ I G ++KK
Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKK 68
>UniRef50_Q9HN64 Cluster: Translation initiation factor 1A 1; n=8;
Halobacteriaceae|Rep: Translation initiation factor 1A 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 95
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 379
P +K++WI + DI+L+ D+QD KADV +Y +A L+ G
Sbjct: 47 PGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDADQLREEG 92
Score = 39.9 bits (89), Expect = 0.058
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 147 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
ED + +A+VT MLG R++ C DG +R I G+++K+
Sbjct: 15 EDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKR 53
>UniRef50_Q4QF06 Cluster: Eukaryotic translation initiation factor
1A, putative; n=7; Trypanosomatidae|Rep: Eukaryotic
translation initiation factor 1A, putative - Leishmania
major
Length = 168
Score = 41.9 bits (94), Expect = 0.014
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 257 KKVWINQGDIILIGLRDY-QDAKADVILKYTPDEARNLKTYGGFPETVRINE 409
+KVWI QGD++L+ R++ ++ D+I ++TP E R L P R E
Sbjct: 71 RKVWIGQGDVVLVAKREFNENDVVDIIHRFTPAEVRLLVKENAIPRDFRSAE 122
Score = 35.9 bits (79), Expect = 0.94
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 147 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
++G+EYAQV K LGN RLE G + IRG + +K
Sbjct: 34 DEGEEYAQVKKALGNLRLELQLAGGSTVIGAIRGAMVRK 72
>UniRef50_O29481 Cluster: Translation initiation factor 1A; n=4;
Euryarchaeota|Rep: Translation initiation factor 1A -
Archaeoglobus fulgidus
Length = 97
Score = 41.9 bits (94), Expect = 0.014
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3
Query: 144 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
++ G+ + VT MLG G ++ C DG++RL I GK+ KK
Sbjct: 15 RKKGELFGVVTSMLGAGHIKVRCEDGVERLARIPGKMRKK 54
Score = 41.1 bits (92), Expect = 0.025
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 379
P + RKK+WI +GD++++ +Q +AD++ +YT + L+ G
Sbjct: 48 PGKMRKKIWIREGDVVIVVPWSFQKDRADIVWRYTNPQVEWLERKG 93
>UniRef50_Q9DFP1 Cluster: Eukaryotic translation initiation factor
1A; n=1; Gillichthys mirabilis|Rep: Eukaryotic
translation initiation factor 1A - Gillichthys mirabilis
(Long-jawed mudsucker)
Length = 70
Score = 40.7 bits (91), Expect = 0.033
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 162 YAQVTKMLGNGRLEAMCFDG 221
YA V KMLGNGRL+AMCFDG
Sbjct: 36 YALVIKMLGNGRLDAMCFDG 55
>UniRef50_Q8ZXV9 Cluster: Translation initiation factor 1A; n=3;
Pyrobaculum|Rep: Translation initiation factor 1A -
Pyrobaculum aerophilum
Length = 114
Score = 40.3 bits (90), Expect = 0.044
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETV 397
P R+++W+ GD +++ L D+ K D++ KY + LK GF E +
Sbjct: 57 PGRLRRRLWLKAGDYVIVALWDFDREKGDIVHKYEKRDVEELKR-RGFAEAI 107
Score = 34.3 bits (75), Expect = 2.9
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 DGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
+G+ +V +MLG+GR + +C DG R+ + G+L ++
Sbjct: 26 EGEILGKVIEMLGDGRFKVICADGQIRVARLPGRLRRR 63
>UniRef50_Q2FSC8 Cluster: Translation initiation factor eIF-1A; n=3;
Methanomicrobiales|Rep: Translation initiation factor
eIF-1A - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 113
Score = 39.9 bits (89), Expect = 0.058
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDE 355
+K+ WI +GDII+I +QD K D+ +YTP +
Sbjct: 70 KKRAWIREGDIIIIVPWSFQDDKCDITYRYTPPQ 103
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 144 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
K + +++A M+G + C DG+ RL I+GK++K+
Sbjct: 33 KSNNEQFAIAELMMGANHIRVRCSDGVTRLGRIKGKMKKR 72
>UniRef50_Q0W7X8 Cluster: Translation initiation factor 1A; n=2;
Euryarchaeota|Rep: Translation initiation factor 1A -
Uncultured methanogenic archaeon RC-I
Length = 96
Score = 39.9 bits (89), Expect = 0.058
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 379
+K+ W+ +GDI+++ D+Q+ K D+I +YT +A L G
Sbjct: 50 KKRTWVREGDIVIVVPWDFQNDKGDIIWRYTGPQAEWLSRKG 91
Score = 39.1 bits (87), Expect = 0.10
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 144 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
+ +G+ V +LG R+ C D + R+C IRGK++K+
Sbjct: 13 RREGELLGTVINLLGGSRVLVRCMDSVTRMCRIRGKMKKR 52
>UniRef50_P57676 Cluster: Translation initiation factor 1A; n=1;
Aeropyrum pernix|Rep: Translation initiation factor 1A -
Aeropyrum pernix
Length = 111
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPE 391
P + R++VW+ +GD++L D K +V+ +Y DE R L PE
Sbjct: 52 PGKMRRRVWMREGDVVLFLPWGTADKKGEVVYRYLRDEVRKLIDMNLLPE 101
>UniRef50_Q9BSC1 Cluster: MGC11102 protein; n=20; Coelomata|Rep:
MGC11102 protein - Homo sapiens (Human)
Length = 165
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 233 VSHPRETRKKVWINQGDIILIG-LRDYQDAKADVILKYTPDEARNLKTYGGFPE 391
VS P + RK +WI +GD +++ + + + KA++ D R+L+ G +PE
Sbjct: 51 VSMPSKYRKNIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKEGFWPE 104
>UniRef50_A7I5X8 Cluster: Translation initiation factor eIF-1A; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Translation
initiation factor eIF-1A - Methanoregula boonei (strain
6A8)
Length = 131
Score = 38.7 bits (86), Expect = 0.13
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDE 355
+K+VWI +GD ++I ++QD K D+I +Y P +
Sbjct: 88 KKRVWIREGDTLIIVPWNFQDDKCDIIYRYLPPQ 121
Score = 34.3 bits (75), Expect = 2.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 144 KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
K + + + M+G + CFDG+ R+ I+GK++K+
Sbjct: 51 KWNNEMFGSADLMMGANHIRVRCFDGVTRMGRIKGKIKKR 90
>UniRef50_Q1M2Y3 Cluster: Translation initiation factor eIF-1A-like;
n=1; Platanus x acerifolia|Rep: Translation initiation
factor eIF-1A-like - Platanus acerifolia (London plane
tree)
Length = 50
Score = 37.5 bits (83), Expect = 0.31
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 347 PDEARNLKTYGGFPETVRINETVVYSVDGLDE 442
PDEAR LK YG PE R+NE + +D D+
Sbjct: 2 PDEARLLKAYGELPENTRLNEGIAAGLDEEDD 33
>UniRef50_Q8SS25 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTOR
1A; n=1; Encephalitozoon cuniculi|Rep: EUKARYOTIC
TRANSLATION INITIATION FACTOR 1A - Encephalitozoon
cuniculi
Length = 119
Score = 35.9 bits (79), Expect = 0.94
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 135 LVF-KEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGK 251
LVF +E+G Y Q+ LG G+ + C DG+ R +RG+
Sbjct: 14 LVFAEEEGTVYGQIICPLGQGQFKVSCSDGVYRTAKVRGR 53
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 257 KKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYG 379
++V + GDI+L+ +RD + +AD+ KY P E + LK G
Sbjct: 56 RRVRMVPGDIVLLRVRDGDEKRADIDRKYMPKEVKILKEDG 96
>UniRef50_UPI0000D55DC6 Cluster: PREDICTED: similar to CG3106-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG3106-PA - Tribolium castaneum
Length = 602
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 498 YVILALFMIFAVSLCKIPSVIKHDFNFYLYLL-VIIQASKLICKKTQVE 641
++ILA +IF V +C I ++K D N ++ + I KL+ +KT E
Sbjct: 226 FLILAACIIFGVLVCTIIDLVKRDSNHFVKIFSAISNGQKLLARKTNHE 274
>UniRef50_A0RVP5 Cluster: Translation initiation factor 1; n=4;
Archaea|Rep: Translation initiation factor 1 -
Cenarchaeum symbiosum
Length = 185
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 147 EDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
E+G+ +V K+LG+ ++ C D I R IRGKL+++
Sbjct: 101 EEGEMLGRVIKLLGSDQVLVKCTDEITRRGRIRGKLKRR 139
>UniRef50_A0DSZ4 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=5; cellular organisms|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 3255
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +2
Query: 257 KKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETV 415
K+VW ++ DI+L + YQ DV L + ++ + ++ G + ++ +T+
Sbjct: 287 KRVWSHKQDIMLSDINKYQQEFCDVFLLFLKNDWKEIEQLGDVDQILQFKQTI 339
>UniRef50_Q6LZM1 Cluster: Translation initiation factor 1A; n=6;
Euryarchaeota|Rep: Translation initiation factor 1A -
Methanococcus maripaludis
Length = 104
Score = 33.5 bits (73), Expect = 5.0
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 242 PRETRKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDEARNLKTYG 379
P + ++K+W+ + D++++ + Q D K DVI +YT + L G
Sbjct: 52 PGKLKRKIWVREDDVVIVTPWEVQSDEKCDVIWRYTKGQVDWLNRKG 98
>UniRef50_Q1HQA3 Cluster: Translation initiation factor 1a; n=3;
Endopterygota|Rep: Translation initiation factor 1a -
Bombyx mori (Silk moth)
Length = 150
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 233 VSHPRETRKKVWINQGDIILI-GLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINE 409
VS P + RK +W+ +GD IL+ + + KA+++ D + K +P+ + N+
Sbjct: 52 VSMPTKFRKNIWVKRGDYILVEPIPEGDKVKAEIVKIMNKDSIKFYKENNVWPKQLEDNK 111
Query: 410 T 412
+
Sbjct: 112 S 112
>UniRef50_Q179M7 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 421
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 58 TCRKTKVKEEKIGGEERTKMKLKNVSWSLRKTDKSTPKSQRCSV 189
T RKT VK++KI E+ K KLK S ++ DK+T K + V
Sbjct: 255 TLRKTIVKQKKITEEDTDKDKLKTQSSITQQDDKATVKRTKFRV 298
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,570,334
Number of Sequences: 1657284
Number of extensions: 9797722
Number of successful extensions: 24688
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 24046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24681
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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