Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20856
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...   126   9e-31
AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal glutath...    23   9.1  

>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
           initiation factor 4C (1A) protein.
          Length = 148

 Score =  126 bits (303), Expect = 9e-31
 Identities = 57/68 (83%), Positives = 63/68 (92%)
 Frame = +2

Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDG 433
           RKKVWINQGDIILIGLRDYQD+KADVILKYTPDEARNLKTYG FPE+VRINETV +  + 
Sbjct: 66  RKKVWINQGDIILIGLRDYQDSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEND 125

Query: 434 LDEDIEFG 457
           +D+DIEFG
Sbjct: 126 MDDDIEFG 133



 Score = 89.4 bits (212), Expect = 9e-20
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = +3

Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
           L+FKED QEYAQVTKMLGNGRLEAMCFDG+KRLCHIRGKL KK
Sbjct: 26  LIFKEDEQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal
           glutathione transferase GSTMIC3protein.
          Length = 147

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 643 PYXIINMLHLFTLPGI 690
           PY II  L++FT P +
Sbjct: 79  PYFIIGFLYMFTNPSV 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,436
Number of Sequences: 2352
Number of extensions: 10934
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)