Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20856
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113498-1|AAM29503.1|  148|Drosophila melanogaster RE54849p pro...   130   1e-30
AE014297-2487|AAS65169.1|  148|Drosophila melanogaster CG8053-PB...   130   1e-30
AE014297-2486|AAF55526.1|  148|Drosophila melanogaster CG8053-PA...   130   1e-30
AF169359-1|AAF44294.1|  148|Drosophila melanogaster eukaryotic t...   129   4e-30
BT025911-1|ABG02155.1|  159|Drosophila melanogaster IP07317p pro...    32   0.85 
AE014134-687|AAN10365.1|  159|Drosophila melanogaster CG31957-PA...    32   0.85 

>AY113498-1|AAM29503.1|  148|Drosophila melanogaster RE54849p
           protein.
          Length = 148

 Score =  130 bits (315), Expect = 1e-30
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = +2

Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDG 433
           RKKVWINQGDIIL+GLRDYQD+KADVILKYTPDEARNLKTYG FPE+VRINETV +  DG
Sbjct: 66  RKKVWINQGDIILVGLRDYQDSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDG 125

Query: 434 LDEDIEFG 457
            DEDIEFG
Sbjct: 126 FDEDIEFG 133



 Score = 89.4 bits (212), Expect = 4e-18
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = +3

Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
           L+FKED QEYAQVTKMLGNGRLEAMCFDG+KRLCHIRGKL KK
Sbjct: 26  LIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>AE014297-2487|AAS65169.1|  148|Drosophila melanogaster CG8053-PB,
           isoform B protein.
          Length = 148

 Score =  130 bits (315), Expect = 1e-30
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = +2

Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDG 433
           RKKVWINQGDIIL+GLRDYQD+KADVILKYTPDEARNLKTYG FPE+VRINETV +  DG
Sbjct: 66  RKKVWINQGDIILVGLRDYQDSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDG 125

Query: 434 LDEDIEFG 457
            DEDIEFG
Sbjct: 126 FDEDIEFG 133



 Score = 89.4 bits (212), Expect = 4e-18
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = +3

Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
           L+FKED QEYAQVTKMLGNGRLEAMCFDG+KRLCHIRGKL KK
Sbjct: 26  LIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>AE014297-2486|AAF55526.1|  148|Drosophila melanogaster CG8053-PA,
           isoform A protein.
          Length = 148

 Score =  130 bits (315), Expect = 1e-30
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = +2

Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDG 433
           RKKVWINQGDIIL+GLRDYQD+KADVILKYTPDEARNLKTYG FPE+VRINETV +  DG
Sbjct: 66  RKKVWINQGDIILVGLRDYQDSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDG 125

Query: 434 LDEDIEFG 457
            DEDIEFG
Sbjct: 126 FDEDIEFG 133



 Score = 89.4 bits (212), Expect = 4e-18
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = +3

Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
           L+FKED QEYAQVTKMLGNGRLEAMCFDG+KRLCHIRGKL KK
Sbjct: 26  LIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>AF169359-1|AAF44294.1|  148|Drosophila melanogaster eukaryotic
           translation initiationfactor 1A protein.
          Length = 148

 Score =  129 bits (311), Expect = 4e-30
 Identities = 58/68 (85%), Positives = 63/68 (92%)
 Frame = +2

Query: 254 RKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGGFPETVRINETVVYSVDG 433
           RKKVWINQG+IIL+GLRDYQD+KADVILKYTPDEARNLKTYG FPE+VRINETV +  DG
Sbjct: 66  RKKVWINQGEIILVGLRDYQDSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDG 125

Query: 434 LDEDIEFG 457
            DEDIEFG
Sbjct: 126 FDEDIEFG 133



 Score = 89.4 bits (212), Expect = 4e-18
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = +3

Query: 135 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLEKK 263
           L+FKED QEYAQVTKMLGNGRLEAMCFDG+KRLCHIRGKL KK
Sbjct: 26  LIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKK 68


>BT025911-1|ABG02155.1|  159|Drosophila melanogaster IP07317p
           protein.
          Length = 159

 Score = 31.9 bits (69), Expect = 0.85
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 233 VSHPRETRKKVWINQGDIILI-GLRDYQDAKADVILKYTPDEARNLKTYGGFPE 391
           VS P + RK +W+ +GD +L+  + +    KA++    TP+  +       +P+
Sbjct: 55  VSMPNKFRKSMWVKRGDFLLVEPIEEGDKVKAEICKILTPEHIKEYTKAAIWPD 108


>AE014134-687|AAN10365.1|  159|Drosophila melanogaster CG31957-PA
           protein.
          Length = 159

 Score = 31.9 bits (69), Expect = 0.85
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 233 VSHPRETRKKVWINQGDIILI-GLRDYQDAKADVILKYTPDEARNLKTYGGFPE 391
           VS P + RK +W+ +GD +L+  + +    KA++    TP+  +       +P+
Sbjct: 55  VSMPNKFRKSMWVKRGDFLLVEPIEEGDKVKAEICKILTPEHIKEYTKAAIWPD 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,332,866
Number of Sequences: 53049
Number of extensions: 439894
Number of successful extensions: 911
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)