Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20855
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    31   0.013
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.4  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 0.013
 Identities = 24/66 (36%), Positives = 30/66 (45%)
 Frame = +3

Query: 525 RLRQENVSVDILFNARGKMLILRXXXXXXXXXXXXXXXXXSTNLYFQIFIFLFSTNLYFQ 704
           RL+Q N  V++L NAR K   L                    N+ + I I  F+TNLYF 
Sbjct: 119 RLKQLNAKVEMLKNARVKNTALWKQLRYEHYRLYQLSVLIDNNMSY-IIIVSFATNLYF- 176

Query: 705 IFIFLF 722
           I I LF
Sbjct: 177 IIIQLF 182


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +2

Query: 281 SRTRIMHKNLKAKEEGQCSNGSCKI 355
           ++TR++H++L A+    C N + K+
Sbjct: 609 AKTRVVHRDLAARNVLVCENHTVKV 633


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 252 CTHSSSVQTPSTSGILCLEEKQQPEL 175
           CTH   +   +   I+ ++E QQP L
Sbjct: 568 CTHKVDIPLNAIVEIVLVDEVQQPNL 593


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,862
Number of Sequences: 336
Number of extensions: 2978
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)