Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20855
         (741 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0619 - 4961588-4962409                                           36   0.034
09_01_0032 - 541411-541737,542751-543752                               29   2.9  
09_06_0188 - 21441377-21442201                                         29   3.9  
11_06_0195 - 21138029-21138389,21139796-21140052                       29   5.1  
11_02_0147 - 8791117-8792502                                           28   9.0  

>11_01_0619 - 4961588-4962409
          Length = 273

 Score = 35.9 bits (79), Expect = 0.034
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECK 254
           +CQKC + GHW+YECK
Sbjct: 95  QCQKCFQPGHWTYECK 110


>09_01_0032 - 541411-541737,542751-543752
          Length = 442

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECKAN 260
           RC+ CL++GH + +CK N
Sbjct: 403 RCEDCLQYGHRTRDCKNN 420


>09_06_0188 - 21441377-21442201
          Length = 274

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECKAN 260
           RC +C E GH SYEC  N
Sbjct: 166 RCYECGEEGHLSYECPRN 183


>11_06_0195 - 21138029-21138389,21139796-21140052
          Length = 205

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 303 LCMIRVREGRTRILRLPCTH 244
           +C+  VRE   R+ RLPC+H
Sbjct: 153 VCLDEVRERHQRVTRLPCSH 172


>11_02_0147 - 8791117-8792502
          Length = 461

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +3

Query: 198 QGIRCQKCLEFGHWSYECKANARS-*FVLHVH--ESCIRI*KPKKKVNAAMAAARYP 359
           Q I C KC  + H S +CK +     F    H  E CIR  K +KK  A +     P
Sbjct: 115 QRIFCSKCRSYSHLSRDCKLSVFCIIFAKETHRTEDCIR--KNQKKPVAKVVGCAAP 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,646,879
Number of Sequences: 37544
Number of extensions: 255748
Number of successful extensions: 739
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)