Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20855
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    36   0.002
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    31   0.049
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    29   0.20 
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    29   0.20 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    29   0.20 
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    28   0.26 
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    28   0.35 
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    27   0.46 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   0.61 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    27   0.61 
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    27   0.80 
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    26   1.4  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    25   1.9  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.5  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   2.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   3.2  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   3.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   4.3  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   4.3  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    24   5.7  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   7.5  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.9  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 9/18 (50%), Positives = 16/18 (88%)
 Frame = +3

Query: 204 IRCQKCLEFGHWSYECKA 257
           +RC +CLE GHW+++C++
Sbjct: 660 VRCYRCLELGHWAHDCRS 677



 Score = 27.5 bits (58), Expect = 0.46
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 SARQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 369
           S +Q Q       +T       SQR+R +QQ Q Q  QQ++
Sbjct: 407 SQQQQQQQPQQLLWTTVVRSCPSQRQRQLQQQQQQQQQQQQ 447



 Score = 25.0 bits (52), Expect = 2.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 304 ESESQRRRSMQQWQLQDTQQEK 369
           + + Q ++  QQWQ Q  QQ++
Sbjct: 357 QQQQQHQQQQQQWQQQQQQQQQ 378


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 30.7 bits (66), Expect = 0.049
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 204 IRCQKCLEFGHWSYECKANARS*FVLH 284
           +RC +CLE GH + +C    RS   LH
Sbjct: 289 VRCFRCLERGHTTADCAGEDRSSLCLH 315


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 195 PQGIRCQKCLEFGHWSYECKANA 263
           P+  RC +CLE GH +  C++ A
Sbjct: 503 PERQRCFRCLEMGHIASNCRSTA 525


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECKANARS 269
           RC KC E GH+S +CK   R+
Sbjct: 417 RCFKCWETGHFSRDCKGPDRT 437


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 195 PQGIRCQKCLEFGHWSYECKAN 260
           P+  RC +CLE GH ++ C+++
Sbjct: 472 PERQRCYRCLERGHLAHACRSS 493


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 0.26
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECKANARS 269
           +C KC + GH SY C+   RS
Sbjct: 276 KCYKCWKVGHTSYHCREPDRS 296


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECKANARS 269
           RC +CLE GH   EC+   RS
Sbjct: 235 RCFRCLERGHMVRECQGTNRS 255


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 204 IRCQKCLEFGHWSYECKANARS 269
           ++C KC + GH  +EC    RS
Sbjct: 328 VKCFKCWKLGHKGFECTGQDRS 349


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 204 IRCQKCLEFGHWSYECKA 257
           +RC +CLE GH + +C++
Sbjct: 549 LRCYRCLEHGHNARDCRS 566



 Score = 23.4 bits (48), Expect = 7.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 304 ESESQRRRSMQQWQLQDTQQE 366
           + + Q+R   ++WQ Q  QQ+
Sbjct: 248 QQQQQQRNQQREWQQQQQQQQ 268


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECKA 257
           RC +CLE GH + EC++
Sbjct: 363 RCYRCLERGHIARECRS 379


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 204 IRCQKCLEFGHWSYEC 251
           +RC +CLE GH S +C
Sbjct: 404 LRCYRCLERGHVSRDC 419


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECKA 257
           RC +CLE GH + +C++
Sbjct: 389 RCYRCLERGHLARDCQS 405



 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 304 ESESQRRRSMQQWQLQDTQQEK 369
           +   Q++RS+QQ Q Q  QQ++
Sbjct: 183 QQREQQQRSLQQQQQQQQQQQQ 204


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECKANARS 269
           +C +C E+GH +  C    RS
Sbjct: 213 QCYRCYEYGHTAARCHGKDRS 233


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 195  EKQQPELLAFSSQPDACYMFPESYSESQR 109
            E+QQ    A ++QPD     PE  +E++R
Sbjct: 1019 EEQQTLAAAEAAQPDPASSLPEDMAEAER 1047


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 207 RCQKCLEFGHWSYECKANARS 269
           RC +CLE GH +  C    RS
Sbjct: 465 RCFRCLERGHIAATCTGEDRS 485


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 83  LNICLELYCSNCNRSSIKI 27
           L  C+E++CS C R+ + I
Sbjct: 792 LQDCIEIFCSWCKRNGLTI 810


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 500 SLNQTRSPIHCCCHYQTSSNPPM 432
           S  + R PI CCC    SSN PM
Sbjct: 539 SCYRNRMPI-CCCFCCASSNGPM 560


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 611 HQVQNSSENKHLPSSIEKNINAYI 540
           H++  S +  H P+ +E+  NA+I
Sbjct: 47  HRMAESMDTSHKPNPLEQKTNAHI 70


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 649 QTYTSKFSFSYFQQTYTS 702
           +TY+ K SF Y Q + TS
Sbjct: 116 KTYSKKLSFEYLQHSVTS 133


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 620 LFSCIILIFNKLILPNFHFLIFNKLILPNFYF 715
           L SC+  IF KL+        FN  I+P   F
Sbjct: 7   LLSCLGKIFEKLLESRMALHTFNNNIIPKSQF 38


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 482 SPIHCCCHYQTSS 444
           S I+CCCH+  ++
Sbjct: 145 SKIYCCCHFSMAT 157


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +1

Query: 304 ESESQRRRSMQQWQLQDTQQEK 369
           + + Q+++S+QQ QL   QQ++
Sbjct: 242 QQQQQQQQSLQQQQLSQQQQQQ 263


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,985
Number of Sequences: 2352
Number of extensions: 11150
Number of successful extensions: 51
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)