Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20855
(741 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p pro... 57 2e-08
AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA... 57 2e-08
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 31 1.6
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 30 3.8
BT022780-1|AAY55196.1| 617|Drosophila melanogaster IP14063p pro... 29 8.8
BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro... 29 8.8
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi... 29 8.8
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ... 29 8.8
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA... 29 8.8
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB... 29 8.8
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA... 29 8.8
>AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p
protein.
Length = 176
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECK 254
MTL G R A++K+ FP GIRCQKCL+ GHWSYECK
Sbjct: 1 MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECK 44
>AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA
protein.
Length = 176
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECK 254
MTL G R A++K+ FP GIRCQKCL+ GHWSYECK
Sbjct: 1 MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECK 44
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 204 IRCQKCLEFGHWSYECKANARS 269
IRC +CLEFGH + CK+ RS
Sbjct: 407 IRCFRCLEFGHRAPYCKSVDRS 428
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 195 PQGIRCQKCLEFGHWSYECKA 257
P +RC+KCL FGH + CK+
Sbjct: 183 PLPLRCKKCLRFGHPTPICKS 203
>BT022780-1|AAY55196.1| 617|Drosophila melanogaster IP14063p
protein.
Length = 617
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 664 KFSFSYFQQTYTSKFLFSYFLTNFI 738
KFSF +FQ + S F F F+ +F+
Sbjct: 1 KFSFFFFQYLFCSSFSFPCFILSFV 25
>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p
protein.
Length = 1823
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 235 TGAMSARQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 369
+G Q Q SSS Y N+ S Q+++S QQ Q Q Q++
Sbjct: 718 SGNQYQSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 762
>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
ubiquitin-conjugatingenzyme protein.
Length = 4876
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 272 LGSCVCLALIAPVSKLQALLASYALRKSSSQSCLLFPLSLMPVICS--QSHIQNLKGKIN 99
L C +A + P SKL L+A+Y L++MP+I S Q H++ + K++
Sbjct: 3308 LSRCFHVAALQPDSKLADLIAAYPAAYPGFLEACCSLLNIMPMIPSLAQQHLETILLKLS 3367
>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
protein encore protein.
Length = 1548
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 235 TGAMSARQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 369
+G Q Q SSS Y N+ S Q+++S QQ Q Q Q++
Sbjct: 569 SGNQYQSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 613
>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
protein.
Length = 4876
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 272 LGSCVCLALIAPVSKLQALLASYALRKSSSQSCLLFPLSLMPVICS--QSHIQNLKGKIN 99
L C +A + P SKL L+A+Y L++MP+I S Q H++ + K++
Sbjct: 3308 LSRCFHVAALQPDSKLADLIAAYPAAYPGFLEACCSLLNIMPMIPSLAQQHLETILLKLS 3367
>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
isoform B protein.
Length = 1818
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 235 TGAMSARQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 369
+G Q Q SSS Y N+ S Q+++S QQ Q Q Q++
Sbjct: 713 SGNQYQSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 757
>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
isoform A protein.
Length = 1823
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 235 TGAMSARQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 369
+G Q Q SSS Y N+ S Q+++S QQ Q Q Q++
Sbjct: 718 SGNQYQSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 762
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,602,046
Number of Sequences: 53049
Number of extensions: 482340
Number of successful extensions: 1829
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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