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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20854
         (624 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g72330.1 68414.m08367 alanine aminotransferase, putative simi...    30   1.4  
At1g17290.1 68414.m02107 alanine aminotransferase, putative simi...    30   1.4  

>At1g72330.1 68414.m08367 alanine aminotransferase, putative similar
           to alanine aminotransferase 2 SP|P34106 from Panicum
           miliaceum, SP|P52894 from Hordeum vulgare, GI:4730884
           from Oryza sativa
          Length = 540

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 133 GVTSEKRSEIFKLMSINLCS 192
           G TS+ R +I+K+ S+NLCS
Sbjct: 374 GFTSDVREQIYKMASVNLCS 393


>At1g17290.1 68414.m02107 alanine aminotransferase, putative similar
           to alanine aminotransferase from Panicum miliaceum
           [SP|P34106], GB:AAC62456 GI:3694807 from [Zea mays],
           GI:4730884 from Oryza sativa
          Length = 543

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 133 GVTSEKRSEIFKLMSINLCS 192
           G TS+ R +I+K+ S+NLCS
Sbjct: 377 GFTSDVREQIYKMASVNLCS 396


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,739,096
Number of Sequences: 28952
Number of extensions: 185572
Number of successful extensions: 354
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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