Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20853
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   1.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   1.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   2.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.4  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   5.8  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.6  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   7.6  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = +1

Query: 346 TGFEETNTESAPPNVCKVKPTQQLQSPPPQHYNHVGYQGGYGGL-SVPSPPA--MLFTHH 516
           TG    +T ++PP V   K + Q+QS  P   N   +      L + PSP A  + + H 
Sbjct: 222 TGIPTPSTSASPPTVNIKKESPQMQSYRPTG-NITPHGSNTSSLITTPSPSASPLAYQHE 280

Query: 517 SN 522
            N
Sbjct: 281 YN 282


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +1

Query: 493 PAMLFTHHSNC*DLLNSFPSRVDFTELSWIRVEVNLVVFLV 615
           P +L+T H    D++  + S+  +   +W+    NL   L+
Sbjct: 433 PIILWTSHLTQADVIEKYLSKARYVIQTWVPASDNLPTLLL 473


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 347 LDLKKPIQKALHLMCAK*SQRNNCSPHR 430
           +DLK+ + +AL   CAK +++   + +R
Sbjct: 58  VDLKRVLPEALQTNCAKCTEKQRTAAYR 85


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +3

Query: 621 YGAGSAAPYNYQPPPDMFSSIPSQY 695
           + A ++ P +Y PPP +++   ++Y
Sbjct: 152 HAAATSLPLHYPPPPPVYTHHYARY 176


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -3

Query: 128 LFFVLCQMTFVSLTTRPLLQIV 63
           ++F+L QMTF  +T+  +++ V
Sbjct: 51  IWFILTQMTFSGVTSPTIMKFV 72


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -3

Query: 128 LFFVLCQMTFVSLTTRPLLQIV 63
           ++F+L QMTF  +T+  +++ V
Sbjct: 51  IWFILTQMTFSGVTSPTIMKFV 72


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 14/65 (21%), Positives = 25/65 (38%)
 Frame = +1

Query: 226 PHEHF*YDFALAADLNLKIASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKP 405
           PH H  YDF L      ++   K    +P      +E+ + G     T      + K+ P
Sbjct: 350 PHPHKVYDFELLIKGVYQVNPTKTRTNLPTHRHPQDEIPYCGKIFNLTTRQVRTLYKLPP 409

Query: 406 TQQLQ 420
             +++
Sbjct: 410 NYEIR 414


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 212 NPAT*LIYLLKVVPNLNQSQNQ 147
           NPA   I LL +VP   +S  Q
Sbjct: 323 NPADYFIQLLAIVPEKEESSRQ 344


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 212 NPAT*LIYLLKVVPNLNQSQNQ 147
           NPA   I LL +VP   +S  Q
Sbjct: 323 NPADYFIQLLAIVPEKEESSRQ 344


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 314 LLRKIRRNYNLLDLKKPIQKALHLMCAK*SQR 409
           LL K R + + L+LKK +  A+   C+K S++
Sbjct: 52  LLEKGRCSPDGLELKKNMPDAIETDCSKCSEK 83


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 267 ISCQSEIVLEVLMWTPR 217
           + CQ +I++ ++ W PR
Sbjct: 79  VRCQDQILIFLVNWYPR 95


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 615 YQENHQIDLYSDPRKLRKVHPAGEAVEK 532
           Y  +H  D+Y DP K        E V+K
Sbjct: 92  YDLHHNPDIYPDPEKFDPDRFLPENVQK 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,684
Number of Sequences: 336
Number of extensions: 3834
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)