Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20853
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    30   0.083
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    26   1.4  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    26   1.4  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   3.1  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   5.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.6  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 0.083
 Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
 Frame = +1

Query: 361 TNTESAPPNVCKVKPTQQLQSPPPQHYNH---VGYQGGYGGLSVPSPPAM 501
           TN    PP V + +P    Q PPP H         Q    GL  P  P M
Sbjct: 189 TNAGGGPPGVTQQQPNMMHQQPPPLHQGQQAPPNSQNASSGLQSPLYPWM 238


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 413 NCSPHR-LNITTTWAIREGTVGYQFRRRLPCCLLITAIVRIFSTASPAG 556
           NC P   ++IT    IR  T+ Y F   +PC L+ +  +  F+    +G
Sbjct: 195 NCCPEPYIDITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLPPDSG 243


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 413 NCSPHR-LNITTTWAIREGTVGYQFRRRLPCCLLITAIVRIFSTASPAG 556
           NC P   ++IT    IR  T+ Y F   +PC L+ +  +  F+    +G
Sbjct: 227 NCCPEPYIDITFAIIIRRRTLYYFFNLIVPCVLIASMALLGFTLPPDSG 275


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 550 SRVDFTELSWIRVEVNLVVFLVLHMAPV 633
           SR    +L  IR+ VNLVVF++L +A +
Sbjct: 137 SREFMLKLIAIRMLVNLVVFVILLLAAI 164


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +3

Query: 585 SRGQFGGFPGTPYGAGSAAPYNYQPPP 665
           S GQ G    T    G  AP +YQ PP
Sbjct: 252 SGGQDGNQMDTNQMHGEVAPVSYQEPP 278


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = +1

Query: 361  TNTESAPPNVCKVKPTQQLQSPP-PQHYNHVGYQ 459
            T+    PP V    PTQQ   PP P   +  G Q
Sbjct: 922  THRLEQPPQVVAAAPTQQQPLPPAPAAASSAGVQ 955


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 421  SPPPQHYNHVGYQGGYGG 474
            SP    +  +  QGGYGG
Sbjct: 1471 SPKMYSFRRIAQQGGYGG 1488


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,417
Number of Sequences: 2352
Number of extensions: 16810
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)