Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20853
(724 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated pr... 36 0.19
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 34 0.59
AK022492-1|BAB14056.1| 619|Homo sapiens protein ( Homo sapiens ... 34 0.59
AK000190-1|BAA90997.1| 466|Homo sapiens protein ( Homo sapiens ... 34 0.59
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 34 0.59
AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein. 34 0.59
U80738-1|AAB91437.1| 182|Homo sapiens CAGH1a protein. 33 0.78
BC053361-1|AAH53361.1| 460|Homo sapiens zinc finger protein 384... 33 0.78
AK095734-1|BAC04618.1| 515|Homo sapiens NA. protein. 33 0.78
AB070238-1|BAB85125.1| 576|Homo sapiens nuclear matrix transcri... 33 0.78
BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein. 33 1.0
BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein. 33 1.0
BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear r... 33 1.0
>AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated
protein protein.
Length = 856
Score = 35.5 bits (78), Expect = 0.19
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 361 TNTESAPPNVCKVKPTQQLQSPPPQHYNHVGYQGGYGGLSVPSPPAMLFTHHS 519
++ ++ P V P Q S PP YN GY GY G P PP + + S
Sbjct: 738 SSANTSTPTVSSYSPPQPSYSQPP--YNQGGYSQGYTGPPPPPPPPPAYNYGS 788
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 33.9 bits (74), Expect = 0.59
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 250 FALAADLNLKIASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKPTQQLQS-- 423
F+ A+ + +ASV + T T ++ T S PPN+CKVKP QQLQ+
Sbjct: 2296 FSSASMPQIPVASVTPTASLSGAGTYTTSSLST---KSTTTSDPPNICKVKP-QQLQTSS 2351
Query: 424 -PPPQHYNHV 450
P H++ +
Sbjct: 2352 LPSASHFSQL 2361
>AK022492-1|BAB14056.1| 619|Homo sapiens protein ( Homo sapiens
cDNA FLJ12430 fis, clone MAMMA1003150, weakly similar to
HYPOTHETICAL 118.4 KD PROTEIN IN BAT2-DAL5 INTERGENIC
REGION ).
Length = 619
Score = 33.9 bits (74), Expect = 0.59
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 250 FALAADLNLKIASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKPTQQLQS-- 423
F+ A+ + +ASV + T T ++ T S PPN+CKVKP QQLQ+
Sbjct: 133 FSSASMPQIPVASVTPTASLSGAGTYTTSSLST---KSTTTSDPPNICKVKP-QQLQTSS 188
Query: 424 -PPPQHYNHV 450
P H++ +
Sbjct: 189 LPSASHFSQL 198
>AK000190-1|BAA90997.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ20183 fis, clone COLF0283. ).
Length = 466
Score = 33.9 bits (74), Expect = 0.59
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 250 FALAADLNLKIASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKPTQQLQS-- 423
F+ A+ + +ASV + T T ++ T S PPN+CKVKP QQLQ+
Sbjct: 133 FSSASMPQIPVASVTPTASLSGAGTYTTSSLST---KSTTTSDPPNICKVKP-QQLQTSS 188
Query: 424 -PPPQHYNHV 450
P H++ +
Sbjct: 189 LPSASHFSQL 198
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 33.9 bits (74), Expect = 0.59
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 250 FALAADLNLKIASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKPTQQLQS-- 423
F+ A+ + +ASV + T T ++ T S PPN+CKVKP QQLQ+
Sbjct: 2296 FSSASMPQIPVASVTPTASLSGAGTYTTSSLST---KSTTTSDPPNICKVKP-QQLQTSS 2351
Query: 424 -PPPQHYNHV 450
P H++ +
Sbjct: 2352 LPSASHFSQL 2361
>AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein.
Length = 1919
Score = 33.9 bits (74), Expect = 0.59
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 250 FALAADLNLKIASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKPTQQLQS-- 423
F+ A+ + +ASV + T T ++ T S PPN+CKVKP QQLQ+
Sbjct: 1319 FSSASMPQIPVASVTPTASLSGAGTYTTSSLST---KSTTTSDPPNICKVKP-QQLQTSS 1374
Query: 424 -PPPQHYNHV 450
P H++ +
Sbjct: 1375 LPSASHFSQL 1384
>U80738-1|AAB91437.1| 182|Homo sapiens CAGH1a protein.
Length = 182
Score = 33.5 bits (73), Expect = 0.78
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 283 ASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKPTQQLQSPPPQHYNHVGY-- 456
A+ V + A A+ + Q + A + + QQ Q PP H+ G
Sbjct: 74 AAAAAVAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQQQQQQQQQPPPHFQSPGAAP 133
Query: 457 QGGYGGLSVPSPP 495
QGG GG S P+PP
Sbjct: 134 QGGGGGDSNPNPP 146
>BC053361-1|AAH53361.1| 460|Homo sapiens zinc finger protein 384
protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.78
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 283 ASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKPTQQLQSPPPQHYNHVGY-- 456
A+ V + A A+ + Q + A + + QQ Q PP H+ G
Sbjct: 352 AAAAAVAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQQQQQQQQQPPPHFQSPGAAP 411
Query: 457 QGGYGGLSVPSPP 495
QGG GG S P+PP
Sbjct: 412 QGGGGGDSNPNPP 424
>AK095734-1|BAC04618.1| 515|Homo sapiens NA. protein.
Length = 515
Score = 33.5 bits (73), Expect = 0.78
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 283 ASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKPTQQLQSPPPQHYNHVGY-- 456
A+ V + A A+ + Q + A + + QQ Q PP H+ G
Sbjct: 407 AAAAAVAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQQQQQQQQQPPPHFQSPGAAP 466
Query: 457 QGGYGGLSVPSPP 495
QGG GG S P+PP
Sbjct: 467 QGGGGGDSNPNPP 479
>AB070238-1|BAB85125.1| 576|Homo sapiens nuclear matrix
transcription factor4 protein.
Length = 576
Score = 33.5 bits (73), Expect = 0.78
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 283 ASVKKVWEMPAVAENTEELQFTGFEETNTESAPPNVCKVKPTQQLQSPPPQHYNHVGY-- 456
A+ V + A A+ + Q + A + + QQ Q PP H+ G
Sbjct: 468 AAAAAVAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQQQQQQQQQPPPHFQSPGAAP 527
Query: 457 QGGYGGLSVPSPP 495
QGG GG S P+PP
Sbjct: 528 QGGGGGDSNPNPP 540
>BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 361 TNTESAPPNVCKVKPTQQLQSPPPQHYNHVGYQGGYGGLSVPSPPAMLFTHHS 519
++ ++ P V P Q S PP YN GY GY P PP + + S
Sbjct: 638 SSANTSTPTVSSYSPPQPSYSQPP--YNQGGYSQGYTAPPPPPPPPPAYNYGS 688
>BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 361 TNTESAPPNVCKVKPTQQLQSPPPQHYNHVGYQGGYGGLSVPSPPAMLFTHHS 519
++ ++ P V P Q S PP YN GY GY P PP + + S
Sbjct: 638 SSANTSTPTVSSYSPPQPSYSQPP--YNQGGYSQGYTAPPPPPPPPPAYNYGS 688
>BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 856
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 361 TNTESAPPNVCKVKPTQQLQSPPPQHYNHVGYQGGYGGLSVPSPPAMLFTHHS 519
++ ++ P V P Q S PP YN GY GY P PP + + S
Sbjct: 738 SSANTSTPTVSSYSPPQPSYSQPP--YNQGGYSQGYTAPPPPPPPPPAYNYGS 788
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,627,117
Number of Sequences: 237096
Number of extensions: 2508303
Number of successful extensions: 6941
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6936
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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