Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20850
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 34 0.092
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 0.28
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 0.28
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 0.28
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 31 0.65
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 30 2.0
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 30 2.0
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 30 2.0
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 30 2.0
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 29 4.6
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 29 4.6
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 29 4.6
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 29 4.6
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 29 4.6
AC006645-9|AAF39841.2| 293|Caenorhabditis elegans Nematode asta... 28 6.0
U58734-5|AAB52504.3| 870|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 34.3 bits (75), Expect = 0.092
Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 10/161 (6%)
Frame = +3
Query: 249 EEAEPAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAK 428
E + AP +V P AKK D + DSD ++ + AK
Sbjct: 156 EPPKKAPAVTTKVAPKPMAKKQDTSDSDSDSEDSDDGKSKKANPVKVTPVANVLQKVVAK 215
Query: 429 -----SADIKVEE--PAAQPEDSKTEVQATVAEIQKKKNLVLLMQKVL--PTQLPSFPN- 578
S+D +E PAA+P +K + V + + + +K + PT + P
Sbjct: 216 KAASSSSDSSDDEKKPAAKPTPAKPTPKPVVKKAESSSDSSDDEKKPVAKPTSAKATPKP 275
Query: 579 MVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEAS 701
KK DL+ D A P KTP A APK A + +S
Sbjct: 276 AAKKADLSSDFSDDEA--PAKKTPAKA-APKPASKKAESSS 313
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 32.7 bits (71), Expect = 0.28
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Frame = +3
Query: 252 EAEPAPVSNDEVPAIPEAKKDDIAPEDSDIA-XXXXXXXXXXXXXXXXAKSSEIPDAEAK 428
E +PA + +V +PE + P +A K +P+ A
Sbjct: 5510 EVQPAEIVEQKVVPVPETSAPTVEPTVEKLAPVESKETSEVEPAEIVEQKDVPVPETSAP 5569
Query: 429 SADIKVEEPAAQPEDSKTEVQATVAEIQKKKNLVLLMQKVLPTQLPSFPNM-------VK 587
+ + VE+ A P +SK + AEI ++K+ V + + PT P+ +
Sbjct: 5570 TVEPTVEKLA--PVESKETSEVEPAEIVEQKD-VPVPETSAPTVEPTIEKLAPVESKETS 5626
Query: 588 KIDLAPTVESDAAAIPEIKTP 650
+++ A VE ++PE P
Sbjct: 5627 EVEPAEIVEQKDVSVPETSAP 5647
Score = 30.7 bits (66), Expect = 1.1
Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 12/174 (6%)
Frame = +3
Query: 252 EAEPAPVSNDEVPAIPEAKKDDIAPEDSDI-AXXXXXXXXXXXXXXXXAKSSEIPDAEAK 428
E EPA + + +PE + P + + K +P+ A
Sbjct: 5291 EVEPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIEQKDVPVPETSAP 5350
Query: 429 SADIKVEEPAAQPEDSKTEVQATVAEIQKKKNLV-------LLMQ---KVLPTQLPSFPN 578
+ + VE+ A P DSK + AEI ++K++ LL + ++L +Q F
Sbjct: 5351 TVEPTVEKLA--PVDSKETSEVEPAEIVEQKDVTCEEEIKELLTEVEVELLFSQAEVFSG 5408
Query: 579 MVKKIDLAPTVESDA-AAIPEIKTPEAADAPKLADNPVDEASLLTFHLMRRKLK 737
PTVE A E E A+ + D PV E S T KLK
Sbjct: 5409 STAAPAQEPTVEKLAPVESKETSEVEPAEIVEQKDVPVPETSAPTVEPTVEKLK 5462
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +3
Query: 252 EAEPAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXA-KSSEIPDAEAK 428
E EPA + + +PE + P +A K +P+ A
Sbjct: 4774 EVEPAEIVEQKDVPVPETSAPSVEPTVEKLAPVESKETSEVQQAEIVEQKDVPVPETSAP 4833
Query: 429 SADIKVEEPAAQPEDSKTEVQATVAEIQKKKNL 527
S + VE+ A P +SK + AEI ++K++
Sbjct: 4834 SVEPTVEKLA--PAESKETSEVQPAEIVEQKDV 4864
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 32.7 bits (71), Expect = 0.28
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Frame = +3
Query: 252 EAEPAPVSNDEVPAIPEAKKDDIAPEDSDIA-XXXXXXXXXXXXXXXXAKSSEIPDAEAK 428
E +PA + +V +PE + P +A K +P+ A
Sbjct: 5530 EVQPAEIVEQKVVPVPETSAPTVEPTVEKLAPVESKETSEVEPAEIVEQKDVPVPETSAP 5589
Query: 429 SADIKVEEPAAQPEDSKTEVQATVAEIQKKKNLVLLMQKVLPTQLPSFPNM-------VK 587
+ + VE+ A P +SK + AEI ++K+ V + + PT P+ +
Sbjct: 5590 TVEPTVEKLA--PVESKETSEVEPAEIVEQKD-VPVPETSAPTVEPTIEKLAPVESKETS 5646
Query: 588 KIDLAPTVESDAAAIPEIKTP 650
+++ A VE ++PE P
Sbjct: 5647 EVEPAEIVEQKDVSVPETSAP 5667
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +3
Query: 252 EAEPAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXA-KSSEIPDAEAK 428
E EPA + + +PE + P +A K +P+ A
Sbjct: 4774 EVEPAEIVEQKDVPVPETSAPSVEPTVEKLAPVESKETSEVQQAEIVEQKDVPVPETSAP 4833
Query: 429 SADIKVEEPAAQPEDSKTEVQATVAEIQKKKNL 527
S + VE+ A P +SK + AEI ++K++
Sbjct: 4834 SVEPTVEKLA--PAESKETSEVQPAEIVEQKDV 4864
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 32.7 bits (71), Expect = 0.28
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Frame = +3
Query: 252 EAEPAPVSNDEVPAIPEAKKDDIAPEDSDIA-XXXXXXXXXXXXXXXXAKSSEIPDAEAK 428
E +PA + +V +PE + P +A K +P+ A
Sbjct: 5530 EVQPAEIVEQKVVPVPETSAPTVEPTVEKLAPVESKETSEVEPAEIVEQKDVPVPETSAP 5589
Query: 429 SADIKVEEPAAQPEDSKTEVQATVAEIQKKKNLVLLMQKVLPTQLPSFPNM-------VK 587
+ + VE+ A P +SK + AEI ++K+ V + + PT P+ +
Sbjct: 5590 TVEPTVEKLA--PVESKETSEVEPAEIVEQKD-VPVPETSAPTVEPTIEKLAPVESKETS 5646
Query: 588 KIDLAPTVESDAAAIPEIKTP 650
+++ A VE ++PE P
Sbjct: 5647 EVEPAEIVEQKDVSVPETSAP 5667
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +3
Query: 252 EAEPAPVSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXA-KSSEIPDAEAK 428
E EPA + + +PE + P +A K +P+ A
Sbjct: 4774 EVEPAEIVEQKDVPVPETSAPSVEPTVEKLAPVESKETSEVQQAEIVEQKDVPVPETSAP 4833
Query: 429 SADIKVEEPAAQPEDSKTEVQATVAEIQKKKNL 527
S + VE+ A P +SK + AEI ++K++
Sbjct: 4834 SVEPTVEKLA--PAESKETSEVQPAEIVEQKDV 4864
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical protein
F52H3.7a protein.
Length = 1245
Score = 31.9 bits (69), Expect = 0.49
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 10/149 (6%)
Frame = +3
Query: 252 EAEPAPVSN--DEVPAIPEAKKDDIAPED--SDI-AXXXXXXXXXXXXXXXXAKSSEIPD 416
E+ PA S + PA+ E KD+ AP + D+ A E
Sbjct: 565 ESTPAEHSAPAESAPALAEEHKDEAAPSEPVQDVPVEEVIEAVHIAPAESAPASVEEAAP 624
Query: 417 AEAKSADIKVEEPAAQPEDS-----KTEVQATVAEIQKKKNLVLLMQKVLPTQLPSFPNM 581
+E+ A ++ + A DS K E A AE + + + PT L S ++
Sbjct: 625 SESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEEHKDEASPTALESVEDV 684
Query: 582 VKKIDLAPTVESDAAAIPEIKTPEAADAP 668
++ + +A T ES A + + + ++ AP
Sbjct: 685 IEAVHVAST-ESAPAPVEDAASADSTQAP 712
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 249 EEAEPAPVSNDEVPAIPEAKKDDIAPEDSDI 341
E+ P P +E+P +PE ++ P DS+I
Sbjct: 532 EDTTPGPAVTEEIPEVPEPTEEPPTPTDSEI 562
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 249 EEAEPAPVSNDEVPAIPEAKKDDIAPEDSDI 341
E+ P P +E+P +PE ++ P DS+I
Sbjct: 532 EDTTPGPAVTEEIPEVPEPTEEPPTPTDSEI 562
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 127 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 243
V++ +PVA EKDV+PA+ +L ++ + PTE A T
Sbjct: 317 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 353
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 127 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 243
V++ +PVA EKDV+PA+ +L ++ + PTE A T
Sbjct: 515 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 551
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 127 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 243
V++ +PVA EKDV+PA+ +L ++ + PTE A T
Sbjct: 317 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 353
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 127 VSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAAT 243
V++ +PVA EKDV+PA+ +L ++ + PTE A T
Sbjct: 515 VTVVIPVASEKDVLPARKLLARQARL--CLFPTEEARKT 551
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 28.7 bits (61), Expect = 4.6
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Frame = +3
Query: 417 AEAKSADIKVEEPAAQPEDSKTE-VQATVAEIQKKKNLVLLMQKVLPTQLPSFPNMVKKI 593
AE K D K E P +P K E V A E +KK+ +K T
Sbjct: 341 AEKKKPDTKKETPTKKP---KVELVTAKTVEGEKKET-----KKPKSTTKKPTKTAAAST 392
Query: 594 DLAPTVESDAAAIPEIKTPEAADAPKLA-----DNPVDEASLLT 710
PT E A E+K+ AA P + PV+E SL T
Sbjct: 393 KRPPTTEKPTATTEEVKSTTAAAKPSERPTGHDETPVEENSLET 436
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 393 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIQKKKNLVLLMQKVLPTQLPSF 572
A + P A SA + A+ P+ EVQ V + + + P
Sbjct: 50 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 108
Query: 573 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLADNPVDEASLL 707
P + D +S DA+A + PEA +AP++A +DE LL
Sbjct: 109 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEEVLL 156
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 393 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIQKKKNLVLLMQKVLPTQLPSF 572
A + P A SA + A+ P+ EVQ V + + + P
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 573 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLADNPVDEASLL 707
P + D +S DA+A + PEA +AP++A +DE LL
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEEVLL 193
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 393 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIQKKKNLVLLMQKVLPTQLPSF 572
A + P A SA + A+ P+ EVQ V + + + P
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 573 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLADNPVDEASLL 707
P + D +S DA+A + PEA +AP++A +DE LL
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEEVLL 193
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 393 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIQKKKNLVLLMQKVLPTQLPSF 572
A + P A SA + A+ P+ EVQ V + + + P
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 573 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLADNPVDEASLL 707
P + D +S DA+A + PEA +AP++A +DE LL
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEEVLL 193
>AC006645-9|AAF39841.2| 293|Caenorhabditis elegans Nematode astacin
protease protein 2 protein.
Length = 293
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 190 VAPKIDDSVKPTEVAAATEEKKPNL-LQLVTTRYPLYQRPK 309
VAPK+ + K E+A +T+ +K ++L+ T+ P ++ K
Sbjct: 15 VAPKVLEPEKDDEIAVSTQREKTFFDMKLILTKLPTFEPSK 55
>U58734-5|AAB52504.3| 870|Caenorhabditis elegans Hypothetical
protein T27A10.6 protein.
Length = 870
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +3
Query: 411 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIQKKKNLVLLMQKVLPTQLPSFPNMVKK 590
P EA + D+ V + +S+ + Q + ++ +K + PT+L + +
Sbjct: 195 PAPEATTEDVPVSQELDTSFESRQDKQNPLKVVKTQKGA-----EAPPTKLRVPMHPPSR 249
Query: 591 IDLAPTVESDAAAIPEIKTPEAAD 662
++ AP VE A+P I+ AD
Sbjct: 250 VEAAPVVEFQQPAVPLIEIKSDAD 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,265,028
Number of Sequences: 27780
Number of extensions: 232532
Number of successful extensions: 1011
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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