Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20849
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    36   3e-04
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +1

Query: 553 DEDFVLTERACTVFMRQICEGIEFVHRQNILHLDLKPENILCLTKTGNRIKIIDFGL 723
           + DF++  +      RQ+  G+E + +  ++H DL   N+L      + +K+ DFGL
Sbjct: 584 ENDFIIQPKHLLSIARQVALGMEHLAKTRVVHRDLAARNVLVC--ENHTVKVSDFGL 638


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -1

Query: 347 LCTSILFRICLVRFPRASHSSRSHPCFF*S*ISTRERGLDL 225
           LCT I++    ++  + + +S   P  +   ++ RE+  DL
Sbjct: 550 LCTHIIYAFATLKDHKLAEASDKDPEMYDRVVALREKNPDL 590


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,501
Number of Sequences: 336
Number of extensions: 3130
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)