Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20849
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    36   0.001
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    31   0.027
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.78 
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    25   3.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.6  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 562 FVLTERACTVFMRQICEGIEFVHRQNILHLDLKPENILCLTKTGNR-IKIIDFG 720
           FV +E     ++RQI E + + H  +I+H D++P   L  T   +  +K+  FG
Sbjct: 90  FVYSEAVACHYLRQILEALRYCHENDIIHRDVRPACALLATADNSAPVKLGGFG 143


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 31.5 bits (68), Expect = 0.027
 Identities = 19/72 (26%), Positives = 37/72 (51%)
 Frame = +1

Query: 508  LLELITGGELFERVIDEDFVLTERACTVFMRQICEGIEFVHRQNILHLDLKPENILCLTK 687
            + +L+  G L + V +    +  +A   +  QI  G+ ++  + ++H DL   N+  L +
Sbjct: 911  ITQLMPLGCLLDYVRNNKDKIGSKALLNWSTQIARGMAYLEERRLVHRDLAARNV--LVQ 968

Query: 688  TGNRIKIIDFGL 723
            T + +KI  FGL
Sbjct: 969  TPSCVKITVFGL 980


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = +2

Query: 284 ENYEMLSEIGRGKFGTVY--LCREKSTGLEL 370
           +N +++S IG+GK+GTV+  +  EK   +++
Sbjct: 241 DNLKLVSMIGQGKYGTVWKGIVNEKPVAVKI 271


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 368 VPDPC-SFLCTSILFRICLVRFPRASHSSRSHPCFF 264
           +PDP  ++L + ++ R   VR     H SRS PCFF
Sbjct: 93  LPDPLVAWLRSYLMGRTYSVRM--GPHLSRSIPCFF 126


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 658 LDPGGVYSGGERTR 617
           +DPGG  SGG R +
Sbjct: 655 VDPGGTLSGGARAK 668


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -2

Query: 493 PPVVSVVQLDQSRVPESSHHVHLPFHVASLVPP 395
           PP         S V   SHH+H   H A+  PP
Sbjct: 799 PPHPHSALSSHSPVGAGSHHLHHLHHHAAQQPP 831


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,518
Number of Sequences: 2352
Number of extensions: 13361
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)