Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20846
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    29   0.026
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    29   0.026
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    29   0.026
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    29   0.026
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 0.026
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 211 LGMDSDDHRRTREHLG-DMDNFYECLKTALF 300
           L  D   HR  REHLG   DN+YE L+T +F
Sbjct: 12  LDQDQCSHRIVREHLGLKHDNYYE-LETHIF 41


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 29.1 bits (62), Expect = 0.026
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 211 LGMDSDDHRRTREHLG-DMDNFYECLKTALF 300
           L  D   HR  REHLG   DN+YE L+T +F
Sbjct: 326 LDQDQCSHRIVREHLGLKHDNYYE-LETHIF 355


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 29.1 bits (62), Expect = 0.026
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 211 LGMDSDDHRRTREHLG-DMDNFYECLKTALF 300
           L  D   HR  REHLG   DN+YE L+T +F
Sbjct: 559 LDQDQCSHRIVREHLGLKHDNYYE-LETHIF 588


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 29.1 bits (62), Expect = 0.026
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 211 LGMDSDDHRRTREHLG-DMDNFYECLKTALF 300
           L  D   HR  REHLG   DN+YE L+T +F
Sbjct: 559 LDQDQCSHRIVREHLGLKHDNYYE-LETHIF 588


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 361 WPSSAWRISTLSSKPQDSWVY 423
           W   A   S L  +P D W Y
Sbjct: 220 WAGFADSHSPLYKRPHDQWAY 240


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 461 LPQVDSLKSFLCRYTQLS 408
           +PQ++ + +FL R+T  S
Sbjct: 299 IPQLEEMSNFLKRHTGFS 316


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 385  STLSSKPQDSWVYRHRKLFK 444
            S+++ KP DSW     + +K
Sbjct: 2363 SSMTLKPHDSWADIDNEFYK 2382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,206
Number of Sequences: 336
Number of extensions: 3088
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)