Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20845
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein pr...    33   1.0  
BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligas...    33   1.0  
BC108705-1|AAI08706.1|  244|Homo sapiens UBE3B protein protein.        33   1.0  
BC068221-1|AAH68221.1|  244|Homo sapiens UBE3B protein protein.        33   1.0  
BC051266-1|AAH51266.1|  244|Homo sapiens UBE3B protein protein.        33   1.0  
BC032301-1|AAH32301.1| 1026|Homo sapiens UBE3B protein protein.        33   1.0  
AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein.      33   1.0  
AY358738-1|AAQ89098.1|  285|Homo sapiens EPA6 protein.                 30   7.3  

>BX537403-1|CAD97645.1| 1068|Homo sapiens hypothetical protein
           protein.
          Length = 1068

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 20  FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 184
           F++ +    K + LCI KI  ++  +FR     E F+ +C  I+++M   ++ K+
Sbjct: 61  FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115


>BC141880-1|AAI41881.1| 1068|Homo sapiens ubiquitin protein ligase
           E3B protein.
          Length = 1068

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 20  FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 184
           F++ +    K + LCI KI  ++  +FR     E F+ +C  I+++M   ++ K+
Sbjct: 61  FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115


>BC108705-1|AAI08706.1|  244|Homo sapiens UBE3B protein protein.
          Length = 244

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 20  FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 184
           F++ +    K + LCI KI  ++  +FR     E F+ +C  I+++M   ++ K+
Sbjct: 61  FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115


>BC068221-1|AAH68221.1|  244|Homo sapiens UBE3B protein protein.
          Length = 244

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 20  FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 184
           F++ +    K + LCI KI  ++  +FR     E F+ +C  I+++M   ++ K+
Sbjct: 61  FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115


>BC051266-1|AAH51266.1|  244|Homo sapiens UBE3B protein protein.
          Length = 244

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 20  FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 184
           F++ +    K + LCI KI  ++  +FR     E F+ +C  I+++M   ++ K+
Sbjct: 61  FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115


>BC032301-1|AAH32301.1| 1026|Homo sapiens UBE3B protein protein.
          Length = 1026

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 20  FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 184
           F++ +    K + LCI KI  ++  +FR     E F+ +C  I+++M   ++ K+
Sbjct: 61  FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115


>AF251046-1|AAK28419.2| 1068|Homo sapiens UBE3B variant 1 protein.
          Length = 1068

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 20  FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKI 184
           F++ +    K + LCI KI  ++  +FR     E F+ +C  I+++M   ++ K+
Sbjct: 61  FKADDPESTKRSALCIFKIARKLLFLFRIKEDNERFEKLCRSILSSMDAENEPKV 115


>AY358738-1|AAQ89098.1|  285|Homo sapiens EPA6 protein.
          Length = 285

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = +2

Query: 71  KIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDE 178
           KIY EM    R  NSI      C E  N  Y  SDE
Sbjct: 99  KIYVEMKFTLRDCNSIPWVLGTCKETFNLFYMESDE 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,026,219
Number of Sequences: 237096
Number of extensions: 1624998
Number of successful extensions: 2506
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2506
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)