Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20845
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    32   0.48 
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        32   0.48 
U64859-7|AAC69095.1|  344|Caenorhabditis elegans Serpentine rece...    31   0.63 
Z81462-3|CAB03842.2| 1034|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    29   3.4  
M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical pr...    29   3.4  
M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    29   3.4  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 15/59 (25%), Positives = 34/59 (57%)
 Frame = +2

Query: 20  FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKISEIV 196
           ++ + H+++ S   C+ K   ++ I+ + IN+    DI+C EI+  M+    E+ +++V
Sbjct: 336 YRKEQHSILLSE-FCLHKFTPDIIILLKMINN-HTGDIVCTEIVGRMWNEFLERDAKLV 392


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 15/59 (25%), Positives = 34/59 (57%)
 Frame = +2

Query: 20  FQSQNHNLIKSN*LCIIKIYTEMDIIFRKINSIEHFDIICNEIINNMYTRSDEKISEIV 196
           ++ + H+++ S   C+ K   ++ I+ + IN+    DI+C EI+  M+    E+ +++V
Sbjct: 336 YRKEQHSILLSE-FCLHKFTPDIIILLKMINN-HTGDIVCTEIVGRMWNEFLERDAKLV 392


>U64859-7|AAC69095.1|  344|Caenorhabditis elegans Serpentine
           receptor, class h protein11 protein.
          Length = 344

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = -1

Query: 204 LFSTISEIFSSLRVYMLFIISLHIISKCSIEFIFL 100
           LF   S+IFS+ + +++  I ++IIS+C + F+ L
Sbjct: 36  LFRESSQIFSTYKYFIIVHIIINIISECYVSFMML 70


>Z81462-3|CAB03842.2| 1034|Caenorhabditis elegans Hypothetical
           protein C04H5.3 protein.
          Length = 1034

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -1

Query: 543 LYQDHKSL--YLLLIKIYSACYQLQERVLTSFRFAAPKNKLQEPIKASNNFPIRTIVMIN 370
           +Y D K L  Y+ L + +    +L E+ L S +      K++   KA  N  IRT+ +IN
Sbjct: 313 IYIDEKDLFNYVALYESFCVFAKLTEKYLHSLKEKPEDGKIRIDGKALWNMAIRTVSLIN 372

Query: 369 T 367
           +
Sbjct: 373 S 373


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +1

Query: 361 LMSIY-HHNCSYGEVITSFDWLLKLVLGSSESKTSQYPLLQLITSTI-NFNEKQIQ*FMI 534
           ++++Y HH C  GE+++     +K   G    + SQ PL+   T+ + N N   +  ++ 
Sbjct: 422 VVTLYGHHGCGSGEILSIIAGQMKPEYGEVMMEQSQRPLMISKTTDVPNVNYLNVIQYLR 481

Query: 535 LIKK 546
           LI K
Sbjct: 482 LISK 485


>M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical
           protein ZK370.4b protein.
          Length = 1353

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 297 IFSVQVFYNHVNVILFVEMIVRSSCFAV*ITLF 199
           IF V   YNHV +ILF   I+ ++ F V   LF
Sbjct: 12  IFLVTFIYNHVLLILFTVCIIGAAAFFVSYYLF 44


>M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical
           protein ZK370.4a protein.
          Length = 1342

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 297 IFSVQVFYNHVNVILFVEMIVRSSCFAV*ITLF 199
           IF V   YNHV +ILF   I+ ++ F V   LF
Sbjct: 12  IFLVTFIYNHVLLILFTVCIIGAAAFFVSYYLF 44


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +1

Query: 361 LMSIY-HHNCSYGEVITSFDWLLKLVLGSSESKTSQYPLLQLITSTI-NFNEKQIQ*FMI 534
           ++++Y HH C  GE+++     +K   G    + SQ PL+   T+ + N N   +  ++ 
Sbjct: 422 VVTLYGHHGCGSGEILSIIAGQMKPEYGEVMMEQSQRPLMISKTTDVPNVNYLNVIQYLR 481

Query: 535 LIKK 546
           LI K
Sbjct: 482 LISK 485


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +1

Query: 361 LMSIY-HHNCSYGEVITSFDWLLKLVLGSSESKTSQYPLLQLITSTI-NFNEKQIQ*FMI 534
           ++++Y HH C  GE+++     +K   G    + SQ PL+   T+ + N N   +  ++ 
Sbjct: 422 VVTLYGHHGCGSGEILSIIAGQMKPEYGEVMMEQSQRPLMISKTTDVPNVNYLNVIQYLR 481

Query: 535 LIKK 546
           LI K
Sbjct: 482 LISK 485


>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical
           protein F21G4.6 protein.
          Length = 1885

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +1

Query: 274 IEHLNTKDWNQEKLIAFLDLLKKKLSDIVLMSIYHHNCSYGEVITSFDWLLK---LVLGS 444
           +  L+   WN + L A L ++   LSD       +H    G  ++  +W+ +   +V G+
Sbjct: 553 VPKLSRMHWNSDTLPAVLQVMTVSLSDSHSKEDCYHGFHVG--MSVLNWVYRNVFIVRGA 610

Query: 445 SESKTSQYPLLQ 480
           +E+K  ++P LQ
Sbjct: 611 AETK--EFPFLQ 620


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,895,855
Number of Sequences: 27780
Number of extensions: 302583
Number of successful extensions: 810
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)