Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20843
(732 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 161 2e-38
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 155 1e-36
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 153 4e-36
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 147 3e-34
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 136 4e-31
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 125 1e-27
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 124 2e-27
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 122 9e-27
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 120 5e-26
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 115 1e-24
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 106 6e-22
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 94 3e-18
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 84 4e-15
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 82 2e-14
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 79 1e-13
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 77 3e-13
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 73 7e-12
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 73 7e-12
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 69 1e-10
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 65 1e-09
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 64 3e-09
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 62 1e-08
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 61 3e-08
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 61 3e-08
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 59 1e-07
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 58 3e-07
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 58 3e-07
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 57 4e-07
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 55 2e-06
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 55 2e-06
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 50 6e-05
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 48 2e-04
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 46 7e-04
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 46 0.001
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 40 0.063
UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 38 0.33
UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransfera... 38 0.33
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.33
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 36 1.0
UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: V... 36 1.0
UniRef50_A7CME0 Cluster: Putative uncharacterized protein precur... 35 2.4
UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular ... 35 2.4
UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacill... 34 4.1
UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing pr... 33 5.5
UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein P0419B... 33 5.5
UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa... 33 5.5
UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q9Y8V1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1; Psychroba... 33 7.2
UniRef50_Q4Q5C1 Cluster: Putative uncharacterized protein; n=3; ... 33 7.2
UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p... 33 9.5
UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1; Acantha... 33 9.5
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 161 bits (390), Expect = 2e-38
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV Q
Sbjct: 8 HLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQ 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
RL+KVDGKVRTDPTYPAG+MDV++L +
Sbjct: 68 RLVKVDGKVRTDPTYPAGYMDVITLEK 94
Score = 142 bits (345), Expect = 6e-33
Identities = 63/87 (72%), Positives = 73/87 (83%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
+EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPD
Sbjct: 92 LEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPD 151
Query: 434 PLIKVNDSIQLDIATTKIMDFIKFEPG 514
PLI NDS+Q+DIA+ KI D+IKF+ G
Sbjct: 152 PLIHANDSVQVDIASGKITDYIKFDSG 178
Score = 142 bits (343), Expect = 1e-32
Identities = 63/75 (84%), Positives = 70/75 (93%)
Frame = +1
Query: 508 AGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 687
+GNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YI
Sbjct: 177 SGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYI 236
Query: 688 SLPRGKGIRLTIAEE 732
SLP+GKG++L+IAEE
Sbjct: 237 SLPKGKGVKLSIAEE 251
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 155 bits (375), Expect = 1e-36
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI Q
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQ 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
R IK+DGKVRTD TYPAGFMDV+S+
Sbjct: 68 RFIKIDGKVRTDITYPAGFMDVISI 92
Score = 144 bits (350), Expect = 1e-33
Identities = 63/87 (72%), Positives = 74/87 (85%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
I+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPD
Sbjct: 92 IDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPD 151
Query: 434 PLIKVNDSIQLDIATTKIMDFIKFEPG 514
PLIKVND+IQ+D+ T KI DFIKF+ G
Sbjct: 152 PLIKVNDTIQIDLETGKITDFIKFDTG 178
Score = 133 bits (321), Expect = 5e-30
Identities = 56/74 (75%), Positives = 68/74 (91%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 690
GNLCM+TGG NLGR+G I +RERHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K +IS
Sbjct: 178 GNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWIS 237
Query: 691 LPRGKGIRLTIAEE 732
LPRGKGIRLTIAEE
Sbjct: 238 LPRGKGIRLTIAEE 251
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 153 bits (371), Expect = 4e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI Q
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQ 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
R IK+DGKVRTD TYP GFMDV+S+
Sbjct: 68 RFIKIDGKVRTDITYPTGFMDVISI 92
Score = 132 bits (320), Expect = 6e-30
Identities = 55/73 (75%), Positives = 68/73 (93%)
Frame = +1
Query: 514 NLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISL 693
N+CM+TGG NLGR+G I +RERHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K ++SL
Sbjct: 211 NMCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSL 270
Query: 694 PRGKGIRLTIAEE 732
PRGKGIRLTIAEE
Sbjct: 271 PRGKGIRLTIAEE 283
Score = 92.7 bits (220), Expect(2) = 1e-27
Identities = 38/57 (66%), Positives = 49/57 (85%)
Frame = +2
Query: 338 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFE 508
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF+
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFD 208
Score = 54.0 bits (124), Expect(2) = 1e-27
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAK 340
I+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 92 IDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 147 bits (356), Expect = 3e-34
Identities = 66/85 (77%), Positives = 75/85 (88%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT EV+ I+ Q
Sbjct: 8 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQ 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
R I+VDGKVRTD TYPAGFMDVVS+
Sbjct: 68 RHIQVDGKVRTDKTYPAGFMDVVSI 92
Score = 127 bits (307), Expect = 2e-28
Identities = 57/90 (63%), Positives = 70/90 (77%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
I KTNE FRL+YD KGRF +H I EEAK+KLCKV+ + G K +PYL T+DGRTIRYPD
Sbjct: 92 IPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPD 151
Query: 434 PLIKVNDSIQLDIATTKIMDFIKFEPGTCV 523
PLIK ND+I+LD+ KI++FIKF+ G V
Sbjct: 152 PLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181
Score = 118 bits (283), Expect = 2e-25
Identities = 51/74 (68%), Positives = 63/74 (85%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 690
GN+ M+TGGRN GRVG I +RE+H GSF+ +HI+DSTGH FATRL NV+ IGKGTK ++S
Sbjct: 178 GNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVS 237
Query: 691 LPRGKGIRLTIAEE 732
LP+GKGI+LTI EE
Sbjct: 238 LPKGKGIKLTIIEE 251
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 136 bits (330), Expect = 4e-31
Identities = 60/92 (65%), Positives = 70/92 (76%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRLNAP WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G EV IVK
Sbjct: 8 HLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKN 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRRLMNCF 278
R IK+DGK+RTD YP GFMDV+S+ R F
Sbjct: 68 RTIKIDGKIRTDTRYPVGFMDVLSIPRTKENF 99
Score = 105 bits (252), Expect = 1e-21
Identities = 45/87 (51%), Positives = 66/87 (75%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
I +T E FRL+Y+ K RF + +T E+AK+KLCK+++ G +PY+VTHDGRTIRYP
Sbjct: 92 IPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDGRTIRYPH 151
Query: 434 PLIKVNDSIQLDIATTKIMDFIKFEPG 514
P ++ ND+I+L++ T KI+DF+KF+ G
Sbjct: 152 PELQANDTIKLNLETGKIVDFVKFDIG 178
Score = 102 bits (244), Expect = 1e-20
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 690
GN M+ GG +GRVG IV RE HPGSF+IVHIKD+ G+TF TRLNNVF+IGKGT+ ++
Sbjct: 178 GNTAMMIGGNGMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVN 237
Query: 691 LPRGKGIRLTIAEE 732
LP KGI+ + ++
Sbjct: 238 LPLDKGIKKPLLQQ 251
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 125 bits (302), Expect = 1e-27
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRL AP W+L K G +A PSTGPHKLRECLP+ IFLR+RLKYALT E + IVK+
Sbjct: 22 HLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKR 81
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRRLMNCF 278
RL+KVDGKVRT+ YP G MDV+ L + F
Sbjct: 82 RLVKVDGKVRTNYRYPTGLMDVIELGKSNELF 113
Score = 99 bits (238), Expect = 6e-20
Identities = 42/85 (49%), Positives = 62/85 (72%)
Frame = +2
Query: 260 KTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPL 439
K+NELFR+IYD KGRF +H I +EA +KL +V + G K +P++VTHDGRTI Y DP
Sbjct: 108 KSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPS 167
Query: 440 IKVNDSIQLDIATTKIMDFIKFEPG 514
++V+D+++ +I T ++ IKF+ G
Sbjct: 168 VRVHDALKFNIKTGEVESVIKFKVG 192
Score = 83.0 bits (196), Expect = 7e-15
Identities = 38/73 (52%), Positives = 52/73 (71%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 690
G++ M+T G N+GRVGTI E+ SFDIVH+KD++G FATR+ NVF+IG+ IS
Sbjct: 192 GDVAMVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLIS 251
Query: 691 LPRGKGIRLTIAE 729
LP +G+R +I E
Sbjct: 252 LPAREGVRPSILE 264
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 124 bits (299), Expect = 2e-27
Identities = 52/74 (70%), Positives = 64/74 (86%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 690
GNLCM+TGG NLGR+G I +RE HPGSFD+VH+KD+ G++FATRL+N+F+IGKG +IS
Sbjct: 150 GNLCMVTGGTNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNIPWIS 209
Query: 691 LPRGKGIRLTIAEE 732
LP GKGIR TIAEE
Sbjct: 210 LPHGKGIRFTIAEE 223
Score = 119 bits (287), Expect = 6e-26
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = +2
Query: 290 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 469
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 470 IATTKIMDFIKFEPG 514
+ T KI DF KF+ G
Sbjct: 136 LETGKITDFFKFDTG 150
Score = 116 bits (280), Expect = 5e-25
Identities = 53/68 (77%), Positives = 58/68 (85%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLK + APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI Q
Sbjct: 8 HLKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIRMQ 67
Query: 183 RLIKVDGK 206
IK+DGK
Sbjct: 68 HFIKMDGK 75
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 122 bits (294), Expect = 9e-27
Identities = 60/88 (68%), Positives = 69/88 (78%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKR+ A + WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALTG+EV KI Q
Sbjct: 19 HLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALTGDEVKKICMQ 77
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRRL 266
IKVDGK+RTD P MDV+S+ ++
Sbjct: 78 WFIKVDGKIRTDNNLPYWIMDVISIDKM 105
Score = 108 bits (259), Expect = 2e-22
Identities = 52/109 (47%), Positives = 68/109 (62%)
Frame = +2
Query: 224 LSSWIYGCCLIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVT 403
L WI I+K E F LIY + RF +HRITPEE KYKLCK++++ K +P+LV
Sbjct: 92 LPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRKIFVRAKGIPHLVI 151
Query: 404 HDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFEPGTCV*SREAVTWG 550
HD T+R+PD LIKVND+IQ+D+ T KI +KF+ G WG
Sbjct: 152 HDIHTVRHPDSLIKVNDTIQIDLETGKI-TALKFDTGNLCLVTGGGNWG 199
Score = 76.6 bits (180), Expect = 6e-13
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 690
GNLC++TGG N GR+G I +RERHP SFD H+KD+ ++F+ +F+I KG K +IS
Sbjct: 187 GNLCLVTGGGNWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWIS 242
Query: 691 LP 696
LP
Sbjct: 243 LP 244
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 120 bits (288), Expect = 5e-26
Identities = 55/85 (64%), Positives = 63/85 (74%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRL APK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I++Q
Sbjct: 5 HLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQ 64
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
L+ VD R D YPAGFMDVV +
Sbjct: 65 GLVHVDNHPRRDGKYPAGFMDVVEI 89
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/90 (45%), Positives = 53/90 (58%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
I KT + FRL+YDVKGRF + ++ EA+ KL KV + T VP VTHDG IRYPD
Sbjct: 89 IPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRVPVAVTHDGHRIRYPD 148
Query: 434 PLIKVNDSIQLDIATTKIMDFIKFEPGTCV 523
P + D+I ++ K +D IK G V
Sbjct: 149 PHTSIGDTIVYNVKEKKCVDLIKNRQGKAV 178
Score = 79.0 bits (186), Expect = 1e-13
Identities = 33/75 (44%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKG-TKAYI 687
G ++TGG N GR+G IV E HPG+F+I H+KD++G FATR N+F+IGK +
Sbjct: 175 GKAVIVTGGANRGRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQV 234
Query: 688 SLPRGKGIRLTIAEE 732
++P+ +G+R+ + +E
Sbjct: 235 TVPKQQGLRMNVIQE 249
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 115 bits (276), Expect = 1e-24
Identities = 50/86 (58%), Positives = 66/86 (76%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
H KRLNAPK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E L I+K+
Sbjct: 8 HYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNILKK 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLR 260
I VDGKVR D +PAG MDV+S++
Sbjct: 68 NEIYVDGKVRADKNFPAGVMDVISIK 93
Score = 112 bits (270), Expect = 7e-24
Identities = 52/91 (57%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
I+ T E +R++YD G F +HRIT +E+ +KLCKV RV+ G K +PY+VTHDGRTIR+P+
Sbjct: 92 IKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRVSIGSKGIPYIVTHDGRTIRFPN 151
Query: 434 PLIKVNDSIQLDIATTKIMDFIKFEPGT-CV 523
LIK NDSI LD+ K++DFIKF G+ CV
Sbjct: 152 LLIKSNDSIVLDLLNNKVIDFIKFSIGSLCV 182
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/68 (47%), Positives = 49/68 (72%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 690
G+LC++ G N+GR+G ++ GS IV +KD G +F+T+ N+F+IGKGTK++IS
Sbjct: 178 GSLCVVIKGSNIGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFIS 237
Query: 691 LPRGKGIR 714
LPR +G+R
Sbjct: 238 LPRFRGLR 245
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 106 bits (254), Expect = 6e-22
Identities = 45/87 (51%), Positives = 62/87 (71%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
IEKT++ FR++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD RTIR+P+
Sbjct: 204 IEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPN 263
Query: 434 PLIKVNDSIQLDIATTKIMDFIKFEPG 514
P IK+ D+++ D+ KI +F E G
Sbjct: 264 PEIKIGDTLKYDLVNNKIENFAHLESG 290
Score = 98.7 bits (235), Expect = 1e-19
Identities = 42/75 (56%), Positives = 56/75 (74%)
Frame = +1
Query: 508 AGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 687
+GN+C I G N+GRVG I E+H GSFDI H+KD+ G+ FATRL N+F++G+G K++I
Sbjct: 289 SGNVCYIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWI 348
Query: 688 SLPRGKGIRLTIAEE 732
LP G G+R TI EE
Sbjct: 349 ELPSGDGVRETILEE 363
Score = 80.6 bits (190), Expect = 4e-14
Identities = 53/123 (43%), Positives = 66/123 (53%), Gaps = 31/123 (25%)
Frame = +3
Query: 3 HLKRLNAPKAWMLD-------------------------KLGGVY----APRPSTGPHKL 95
HLKR+NAPK+WML+ KL +Y A RPS GPHKL
Sbjct: 89 HLKRINAPKSWMLNKLGGIWVITFFAFRLRKNDFITTIPKLKFIYFKKQATRPSQGPHKL 148
Query: 96 RECLPLVIFLRNRLKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAGFMDVVSLRRLM 269
RE LPL + L+ RL YAL G +V I+ K++ + VDGKVR D YP G MDVV + +
Sbjct: 149 RESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEKTD 208
Query: 270 NCF 278
F
Sbjct: 209 QSF 211
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 94.3 bits (224), Expect = 3e-18
Identities = 42/87 (48%), Positives = 59/87 (67%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKR APK+WMLDK GG +A P++GPHK EC+PL + L+YA E+ I+ +
Sbjct: 8 HLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAE 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRR 263
+ IKV+G+VRT+ +P G DVVS+ +
Sbjct: 68 KNIKVNGRVRTNSHFPVGLFDVVSIEK 94
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/82 (40%), Positives = 56/82 (68%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
IEKT E FR++Y+V +F +HRI+ EEA Y+L KV + + +PY+V+ G +IR+ D
Sbjct: 92 IEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKVTKKYEN-QGIPYIVSSCGLSIRFCD 150
Query: 434 PLIKVNDSIQLDIATTKIMDFI 499
P I + +I++ T+K++++I
Sbjct: 151 PAIDLGYTIKISNETSKVIEYI 172
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +3
Query: 3 HLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 179
H+KRL AP AW + K GG +APRP GPH + +PL+I +R+ L YA E KI+
Sbjct: 11 HVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKIIT 70
Query: 180 QRLIKVDGKVRTDPTYPAGFMDVVSLRR 263
+ I VDG VR +P +P G MDVV + R
Sbjct: 71 RGEIYVDGVVRKEPKFPVGIMDVVEIPR 98
Score = 37.1 bits (82), Expect = 0.44
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT--IRY 427
I +T + +R++ + R + I+ EEA+ K+C++K + HDG+ +
Sbjct: 96 IPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNKTYVRGGNLQITMHDGKNWLVEI 155
Query: 428 PDP------LIKVNDSIQLDI------ATTKIMDFIKFEPGTCV 523
DP + V DS+ L++ + K++D I FE G V
Sbjct: 156 EDPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHIPFEEGVWV 199
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 81.8 bits (193), Expect = 2e-14
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 HLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 179
HL+R AP W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+
Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIIS 62
Query: 180 QRLIKVDGKVRTDPTYPAGFMDVVSL 257
+ +KVDG VR D +P G MDV+ +
Sbjct: 63 RGYVKVDGVVRRDYKFPVGLMDVIEI 88
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HL+R +P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ +
Sbjct: 3 HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGK 62
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
+KVDGKVR D YP G MDV+ L
Sbjct: 63 GYVKVDGKVRRDYKYPVGLMDVIEL 87
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKRL AP W L + + RPS GPH + + LPL++ +R+ LKYA E KI++
Sbjct: 9 HLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQT 68
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
I +DG R + +PAG MDV+S+
Sbjct: 69 GKILIDGLKRKEYKHPAGLMDVLSI 93
Score = 37.9 bits (84), Expect = 0.25
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGK 669
G L ITGG+++G IV E DIV +++ G F T VFI+G+
Sbjct: 185 GKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HL+R AP W + + V+ +PS GPH L +P+ I LR+ YA T E +I+
Sbjct: 11 HLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILAS 70
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
R+I+VDG+V TD +P G MDV+ +
Sbjct: 71 RVIEVDGRVVTDYKFPVGLMDVLHI 95
Score = 37.5 bits (83), Expect = 0.33
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +2
Query: 275 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTI-------RYPD 433
+R++ D + I PEEA YKL +++R T HDGR + Y
Sbjct: 102 YRVVPDPARKLRFVEIKPEEAGYKLAQIRRKMTVKNGDLQFTLHDGRNVLIRKGSEAYST 161
Query: 434 PL-IKVNDSIQLDIATTKIMDFIKFEPGT 517
+ K D++ + I I+ + FE GT
Sbjct: 162 AISYKTYDALLITIPRQSIVSHVPFEVGT 190
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 72.9 bits (171), Expect = 7e-12
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +3
Query: 6 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 185
LK L AP+ W + + +A +P GPH + LPL++ +RN L YA T E K++ +
Sbjct: 10 LKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEG 69
Query: 186 LIKVDGKVRTDPTYPAGFMDVVSL 257
+VDG VR D +P GFMDV+ +
Sbjct: 70 HFRVDGVVRKDYKFPVGFMDVIEV 93
Score = 50.0 bits (114), Expect = 6e-05
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPG-SFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYI 687
G + +I GGRN+GRVG + S ++ G +V ++D++G+ F T L+ VF+IG + I
Sbjct: 187 GAIAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVI 245
Query: 688 SLPRG 702
SLP G
Sbjct: 246 SLPEG 250
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLKR+ AP+ W + + + +P G H +PLV+ LR+ LK A +E+ KI+ +
Sbjct: 5 HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHE 64
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
+ VDGKVR D Y G D +S+
Sbjct: 65 GKVLVDGKVRKDYRYTVGMFDTISI 89
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/85 (34%), Positives = 44/85 (51%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
HLK APK W + + +PS G H + L L + +R+ LK A E +I+
Sbjct: 9 HLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRIINS 68
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
+ VDG+V D +P GFMD++ +
Sbjct: 69 GNVLVDGRVIKDYKFPVGFMDIIEI 93
Score = 50.0 bits (114), Expect = 6e-05
Identities = 28/90 (31%), Positives = 46/90 (51%)
Frame = +2
Query: 254 IEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 433
I KT E++R++ D KGR +++I EE KLCK+ +T + HDG+ + +
Sbjct: 93 IPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVNKSTIKGGKIQVNLHDGKNVIIDE 150
Query: 434 PLIKVNDSIQLDIATTKIMDFIKFEPGTCV 523
V D I L + +I + + + G CV
Sbjct: 151 NDYNVGDVIDLKVPDHEINEVFELKEGACV 180
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/85 (40%), Positives = 45/85 (52%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
H+ R AP + K + R GPHK++E +PL I L+ LK T E +I+
Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFD 62
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
+ VDGKVR D YP G MDVV +
Sbjct: 63 GKVLVDGKVRRDYKYPVGLMDVVEI 87
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
H+KRL P++W L + ++ +P+ G H C+PL + LR+ L A E +++
Sbjct: 5 HMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLAT 64
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
R + VDG++ TD G MDV+++
Sbjct: 65 RQVLVDGRIETDLGRGVGLMDVLTV 89
Score = 36.3 bits (80), Expect = 0.77
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +2
Query: 275 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD-PLIKVN 451
FR I DV G+ I+ + A KLC+V +T + HDGR I D L
Sbjct: 94 FRCILDVNGKLRYRSISDKAAASKLCRVMGKSTITDGKTQIHLHDGRNILVSDAKLYDSG 153
Query: 452 DSIQLDIATTKIMDFIKFEPG 514
D++ + + + F G
Sbjct: 154 DTLVISLPDQSVAGHHPFSKG 174
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
H KR++ PK+W + K + GPH + +PL + LR+ L E +++ +
Sbjct: 4 HQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSE 63
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
+ VDG R D +P G MD++++
Sbjct: 64 GNVLVDGVARKDLRFPVGLMDIITI 88
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/85 (34%), Positives = 44/85 (51%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
H KRL+ PK+W + + G + GPH LPL + +R+ LK E +I+ +
Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSE 62
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSL 257
+ VDG R D +P G DV++L
Sbjct: 63 GKVLVDGISRKDLRFPVGLFDVITL 87
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/88 (36%), Positives = 45/88 (51%)
Frame = +2
Query: 251 LIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 430
+IE E +R++Y+ +G + + T E A KL KV+ P N L THDGRT
Sbjct: 85 VIEINGESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITD 144
Query: 431 DPLIKVNDSIQLDIATTKIMDFIKFEPG 514
D KV D + + KI + IK +PG
Sbjct: 145 DKSKKVGDVWAVSVPDMKISEIIKMQPG 172
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +3
Query: 9 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 188
KRL + + + + P P+ G H + + L+ +R+ LK + E +I+ L
Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 65
Query: 189 IKVDGKVRTDPTYPAGFMDVVSL 257
+KVDGK + + GFMDV+ +
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEI 88
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/91 (28%), Positives = 50/91 (54%)
Frame = +3
Query: 9 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 188
K + A + + + ++ P+ H + +P++I LR+ LK E+ +I+ +
Sbjct: 7 KIMMASRKLKIPRKTNFWSVTPTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNM 66
Query: 189 IKVDGKVRTDPTYPAGFMDVVSLRRLMNCFV 281
+KVDG++ D +P GFMDV+S+ L N ++
Sbjct: 67 VKVDGRIVKDRRFPVGFMDVLSIDTLENDYI 97
Score = 35.1 bits (77), Expect = 1.8
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 281 LIYDVKGRFTIHRITPEEAKYKLCK-VKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 457
++YD KG+ I + P KL K VK+ G + L HDG+TI I +D
Sbjct: 98 IVYDRKGKLVIRQNAPGNKGLKLFKVVKKTIIGTGKI-QLGFHDGKTIVTDRKDINTSDV 156
Query: 458 IQLDIATTKIMDFIKFEPG 514
+ + I +I + +K G
Sbjct: 157 LLMKIPDLEIENVLKIAEG 175
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/72 (44%), Positives = 40/72 (55%)
Frame = -1
Query: 732 FLGDGEADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAH 553
F+ DGE D LA +RD RL A D EHV + R + ++ GVL VHN EG + LA D
Sbjct: 30 FVDDGELDTLALGKRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALDHPD 89
Query: 552 TPQVTASRDHTQ 517
V + DH Q
Sbjct: 90 ATGVVTTGDHAQ 101
Score = 38.3 bits (85), Expect = 0.19
Identities = 25/88 (28%), Positives = 46/88 (52%)
Frame = -3
Query: 517 SSRLKLDEVHNLRSCNV*LDGIVDFDKWVWIADGAAIMRYQVRNILRSGRHTLDFTQLVL 338
S+ ++LD + +L +V +G+ D + + +GAA+++ R+ L QLVL
Sbjct: 102 SADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHALVPELLAPHLAQLVL 161
Query: 337 SLLRGDTVDCESALNIID*TKQFISLLN 254
D V ES+L ++D + FI+L +
Sbjct: 162 RFDSLDAVHNESSLGVVDEPEVFIALFD 189
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/86 (32%), Positives = 47/86 (54%)
Frame = +3
Query: 9 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 188
KR+ AP AW + + Y S+GPH LP+ I+LR+ +++AL EV KI+ R
Sbjct: 5 KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63
Query: 189 IKVDGKVRTDPTYPAGFMDVVSLRRL 266
+ ++G + TD D++S ++
Sbjct: 64 VLLNGHIVTDEHIGIDVFDIISFPKI 89
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/88 (34%), Positives = 48/88 (54%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
+LKRL AP +W + K + + + GPH LP+ ++LR + A +EV KI+ Q
Sbjct: 4 YLKRLVAPGSWHIPKKVQKFVMKTAPGPHN-AGALPVGVWLREHIGLAQNASEVKKILHQ 62
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVSLRRL 266
R + V+G+ D G D+VS+ +L
Sbjct: 63 RDVLVNGRACKDSRMGLGVFDIVSIPKL 90
Score = 38.7 bits (86), Expect = 0.15
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSF--DIVHIKDSTGHTFATRLNNVFIIGKGTKA 681
GN+ MI GG++ G+VG IV R S ++ DS G F T VF++G+ A
Sbjct: 177 GNVAMIVGGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGRSAIA 235
Score = 33.9 bits (74), Expect = 4.1
Identities = 22/81 (27%), Positives = 34/81 (41%)
Frame = +2
Query: 236 IYGCCLIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGR 415
++ I K + +R+ DVKG I E AK +LCK++ T L G
Sbjct: 81 VFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKIRNKTTVKGGKVQLNFAFGA 140
Query: 416 TIRYPDPLIKVNDSIQLDIAT 478
+ D K DS+ + + T
Sbjct: 141 NV-LADNTYKAKDSVVVTLGT 160
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 HLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 179
HL+ L P+ W + K G + +PS GPH +P+ ++LR+ L A EV ++
Sbjct: 8 HLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLN 67
Query: 180 QRLIKVDGKVRTDPTYPAGFMDVVSL 257
+ VDG+ D +P G DV+++
Sbjct: 68 NGKVLVDGRPIKDYKFPVGLFDVLAI 93
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
H KRL+ P +W +++ + + GPH +PL+I LR+ L YA E + +
Sbjct: 4 HQKRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNE 62
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVS 254
+ ++GK +D P G D+++
Sbjct: 63 DNVLINGKAISDEERPVGMFDILA 86
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +2
Query: 266 NELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIK 445
N+ +R++ G+ T++ I E K+CKV ++ ++T D R ++ IK
Sbjct: 96 NKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKNKIIITDDLRELKINYAKIK 155
Query: 446 VNDSIQLDIATTKIMDFIKFEPGT-CV*SR 532
V DS+ + +I+ +KFE G+ C+ +R
Sbjct: 156 VEDSLLIKTINDEIVYALKFEVGSLCLITR 185
Score = 40.3 bits (90), Expect = 0.048
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +3
Query: 3 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 182
H KR+++ K G++ + S+GPH + + L+ ++ A E K+VK
Sbjct: 8 HQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKT 67
Query: 183 RLIKVDGKVRTDPTYPAGFMDVVS 254
+ V+GK +P MD +S
Sbjct: 68 GFLYVNGKKCLSHKFPISLMDTIS 91
Score = 37.1 bits (82), Expect = 0.44
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +1
Query: 511 GNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYIS 690
G+LC+IT G++LG + I + ++H++ G + +++ +IG+ + +S
Sbjct: 178 GSLCLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILS 237
Query: 691 L 693
L
Sbjct: 238 L 238
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +3
Query: 9 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 188
K + AP+ + + +A G HK +PL+I LR+ LK E+ +I+ L
Sbjct: 6 KIMMAPRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSL 65
Query: 189 IKVDGKVRTDPTYPAGFMDVVSL 257
+ VDGKV + GFMD +++
Sbjct: 66 VMVDGKVVKERRRGIGFMDTLTV 88
Score = 36.7 bits (81), Expect = 0.59
Identities = 26/79 (32%), Positives = 35/79 (44%)
Frame = +2
Query: 287 YDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQL 466
YD KG+ I E KL +VK + HDG T+ IK DS+ +
Sbjct: 97 YDRKGKLVILPKPGETKGLKLLRVKGKTYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLV 156
Query: 467 DIATTKIMDFIKFEPGTCV 523
I +I+D +KF PG V
Sbjct: 157 KIPKKEIVDVLKFAPGNRV 175
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/84 (32%), Positives = 37/84 (44%)
Frame = +3
Query: 6 LKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 185
LKR AP W + + G + G H +P + LR+ L T E K +
Sbjct: 10 LKRQMAPSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIYSG 69
Query: 186 LIKVDGKVRTDPTYPAGFMDVVSL 257
++VDG RT + G MDVV L
Sbjct: 70 NVEVDGVKRTSLHHGIGLMDVVEL 93
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 39.9 bits (89), Expect = 0.063
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = -1
Query: 723 DGEADALAARQRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEGAGMSLAGHDGAHTPQ 544
D + D L R+R RL LA+ EH+ Q + + G+L+V ++G + L D ++T
Sbjct: 99 DRQLDXLTLRKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVLLPVLDDSNTAP 158
Query: 543 VTASRDHTQVP 511
V ++ H +P
Sbjct: 159 VPSTSHHDNIP 169
>UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630024D08
product:hypothetical Histidine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 3
days neonate thymus cDNA, RIKEN full-length enriched
library, clone:A630024D08 product:hypothetical
Histidine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 139
Score = 37.5 bits (83), Expect = 0.33
Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 552 CGHHRVPRETSR-LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 722
C HH R LLR + G H RH +R H RQ EGV R+GHP HH
Sbjct: 55 CAHHLSADPAERVLLRGVSPPGEALGHQRHY--ERQHVRQHVEGVGQHGERRGHPAHH 110
>UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransferase;
n=4; Rhodospirillaceae|Rep: Predicted SAM-dependent
methyltransferase - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 820
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +3
Query: 606 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 731
H+G TH R + RQGH+ V AA R GHP HHR G
Sbjct: 24 HRGDQETHDRIGPQLVPGTRQGHQAVDHAAPR-GHPQHHREG 64
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 37.5 bits (83), Expect = 0.33
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 639 EVEQRVHNRQ---GHEGVHLAAARQGHPPHHRRG 731
E Q+VH R+ G E +HL + HPPHHR+G
Sbjct: 441 EYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKG 474
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 35.9 bits (79), Expect = 1.0
Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 715 GGCP--CRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQ----CRR-SRDVSRGTRWC 557
GGC C C CR R RRC PWSP CAQ C + RDV +G C
Sbjct: 128 GGCEHDCVQLTANQHQCRCRRQYRLREDGRRCAPWSP-CAQRNGGCMQLCRDV-QGAARC 185
Query: 556 PHAPSYGL 533
P Y L
Sbjct: 186 ECRPGYRL 193
>UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: VrrB
- Bacillus anthracis
Length = 115
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +3
Query: 597 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVH----LAAARQGHPPHH 722
H HQG HG H H +Q+VH+ GH +H L QGH HH
Sbjct: 41 HHHHQGHHGHHGHH--QQQVHH-HGHHHIHPQAILYQTHQGHQGHH 83
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/42 (45%), Positives = 20/42 (47%)
Frame = +3
Query: 597 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 722
H HQG HG H H H+ QGH G H QGH HH
Sbjct: 17 HQGHQGHHG-HQGH------HHHQGHHGHHGHHHHQGHHGHH 51
>UniRef50_A7CME0 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 533
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 531 GRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQ-RVHNRQGHEG-VHLAAARQ 704
G+P + A HRV +E + R H+ + H+ EQ RVH R G EG + A Q
Sbjct: 317 GKPAVQALEAHRVDQERADRRRDAPHRNVQRFHVDARAEQERVHQRDGAEGHEDVFAEEQ 376
Query: 705 GH 710
H
Sbjct: 377 AH 378
>UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular
organisms|Rep: Tryptophan-rich antigen - Plasmodium
vivax
Length = 2662
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 597 HCAHQGLHGTHLRHEVEQRVHNRQGHE-GVHLAAARQG--HPPH-HRRG 731
H H G H +H ++ VH Q H+ GVH A Q HP H H+RG
Sbjct: 389 HPKHAHQKGVHPKHAHQKGVHPEQAHQRGVHPEQAHQKGVHPKHAHQRG 437
>UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacillus
anthracis
Length = 265
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 597 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 728
H HQG HG H H + GH+G H GH HH++
Sbjct: 128 HHHHQGHHGHHGHHHHQ----GHHGHQGHHHHQGHHGHHGHHQQ 167
Score = 33.1 bits (72), Expect = 7.2
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +3
Query: 597 HCAHQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARQGHPPHH 722
H H G HG H H H+ QGH G QGH HH
Sbjct: 119 HQGHHGHHGHHHHQGHHGHHGHHHHQGHHGHQGHHHHQGHHGHH 162
>UniRef50_A0YER0 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 110
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 525 DHGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHE 677
DH R A HR R RL + H+G+ L+H++EQ +G +
Sbjct: 60 DHQRLFKAALARHRKSRRDQRLHKSLRHKGIAQAELQHKIEQDYQETKGQK 110
>UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing protein
35; n=1; Xenopus tropicalis|Rep: Coiled-coil
domain-containing protein 35 - Xenopus tropicalis
Length = 957
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 588 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 728
LLRHC + T L++ Q V +++ HE + Q + PHH R
Sbjct: 893 LLRHCGPEASSETELQNTGPQVVASQKTHEKLDNLPTDQANTPHHHR 939
>UniRef50_Q5QMN1 Cluster: Putative uncharacterized protein
P0419B01.9; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0419B01.9 - Oryza sativa subsp. japonica (Rice)
Length = 123
Score = 33.5 bits (73), Expect = 5.5
Identities = 29/67 (43%), Positives = 30/67 (44%), Gaps = 14/67 (20%)
Frame = -3
Query: 706 PC-RAAARCTPSC---PCRL*TR-------CSTSWRRCV-PWSP*CAQ--CRRSRDVSRG 569
PC RAAA C P C PCR R C + CV P SP CA CRR R R
Sbjct: 41 PCVRAAAPCVPPCTSRPCRRPRRHLRPPSACVRAAALCVPPSSPPCASRPCRRPRHRLRP 100
Query: 568 TRWCPHA 548
C HA
Sbjct: 101 PAACVHA 107
>UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0101400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 361
Score = 33.5 bits (73), Expect = 5.5
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 597 HCAHQGLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRR 728
H HQ LH +H + Q VH+R H R+ HP HHRR
Sbjct: 128 HLRHQHLHPSHQQQPPPPQPVHHRHRHH----VRRRRAHPRHHRR 168
>UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 228
Score = 33.5 bits (73), Expect = 5.5
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 558 HHRV-PRETSRLLRHCAHQGLHGTH-LRHEVEQRVH-NRQGHEGVHLAAARQGHPPHHRR 728
HH + P + + L H HQ LH TH L H + Q + Q H +H PHH R
Sbjct: 95 HHTLQPPQVTVQLHHHIHQHLHHTHQLHHHIHQLLQVIVQHHHPIHQHHHHTHQHPHHIR 154
>UniRef50_Q9Y8V1 Cluster: Putative uncharacterized protein; n=1;
Aeropyrum pernix|Rep: Putative uncharacterized protein -
Aeropyrum pernix
Length = 688
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 633 EGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPG--SNLMKSIIFVVAMSNW 460
+ +++G++D+ G G G HTP+V A + T PG + + +++ + + W
Sbjct: 505 KSLAKGMIDLLWSPGGGYFRLSPPGPHTPEVPAEAEDTAYPGAYATAIHALLLIHRATGW 564
Query: 459 MES 451
M++
Sbjct: 565 MKA 567
>UniRef50_A5WHY9 Cluster: TonB-dependent receptor; n=1;
Psychrobacter sp. PRwf-1|Rep: TonB-dependent receptor -
Psychrobacter sp. PRwf-1
Length = 836
Score = 33.1 bits (72), Expect = 7.2
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +3
Query: 561 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPH 719
HR+ R T L H H H H+ E+ H GHE GH H
Sbjct: 314 HRINRLTCGLDEHEHGAHEHHDHEEHDHEEHEHEEHGHEAHEHGHEEHGHQEH 366
>UniRef50_Q4Q5C1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 667
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 642 PRGEGVS-RGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPGS--NLMKSIIFVVA 472
PR +G+S R V VH+ + H G +P + +R PGS N M + A
Sbjct: 83 PRTDGISERDVNQVHSASRKDAAFGHHFGTSSPSASITRARAAKPGSGVNAMLQLARYHA 142
Query: 471 MSNWMESL 448
+W E++
Sbjct: 143 SGSWSEAV 150
>UniRef50_Q8SZT1 Cluster: GH27708p; n=18; Eumetazoa|Rep: GH27708p -
Drosophila melanogaster (Fruit fly)
Length = 647
Score = 32.7 bits (71), Expect = 9.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 558 HHRVPRETSRLLRHCAH-QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP--PHH 722
HH+ ++ + +H H Q H H +H ++Q+ +Q H GHP PHH
Sbjct: 123 HHQQQQQHQQQQQHQQHLQQHHQAHHQHVLQQQQQQQQQHSQHQHQQQHHGHPLHPHH 180
>UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Cysteinyl-tRNA
synthetase - Mimivirus
Length = 509
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +3
Query: 36 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKV 197
+LDKLG +Y S+ HK+++ + ++I R++L+ ++ +K++L +
Sbjct: 421 LLDKLGFIYRVGNSSSSHKIKDLMNILIETRSQLRQLTRNPDLSPGIKKQLFDI 474
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,337,879
Number of Sequences: 1657284
Number of extensions: 18993164
Number of successful extensions: 61631
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 57524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61441
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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