Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20841
(697 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 101 1e-22
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 100 2e-22
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 91 1e-19
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 88 1e-18
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 79 5e-16
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 73 3e-14
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 60 2e-10
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 39 6e-04
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 32 0.068
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 5.9
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 5.9
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 25 7.8
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 101 bits (242), Expect = 1e-22
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = +1
Query: 508 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKL 687
F DENFKL H G LSMANAG D+NGSQFFITTVKTPWLDG HVVFG+VL G D+V+K+
Sbjct: 106 FPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
Score = 96.3 bits (229), Expect = 4e-21
Identities = 47/86 (54%), Positives = 57/86 (66%)
Frame = +2
Query: 251 SQGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRV 430
++GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRV
Sbjct: 20 NRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRV 79
Query: 431 IKNFMIQXXXXXXXXXXXXRSIYGER 508
I NFMIQ +SIYG R
Sbjct: 80 IPNFMIQGGDITKGDGTGGKSIYGSR 105
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 100 bits (240), Expect = 2e-22
Identities = 46/60 (76%), Positives = 51/60 (85%)
Frame = +1
Query: 508 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKL 687
F DENF LKH G LSMANAG +TNGSQFFITTV TPWLDG+HVVFG+V EGMDVV+K+
Sbjct: 81 FPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKV 140
Score = 61.7 bits (143), Expect = 1e-10
Identities = 32/75 (42%), Positives = 38/75 (50%)
Frame = +2
Query: 284 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 463
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 464 XXXXXXXXRSIYGER 508
+SIYGE+
Sbjct: 66 TRGNGTGGKSIYGEK 80
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 91.1 bits (216), Expect = 1e-19
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +1
Query: 505 TFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQK 684
TF DENF LKH G LSMANAGKD+NG QFFITTV +LDG+HVVFG+V+EG D+V++
Sbjct: 90 TFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKE 149
Query: 685 L 687
+
Sbjct: 150 I 150
Score = 48.0 bits (109), Expect = 1e-06
Identities = 31/66 (46%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Frame = +2
Query: 278 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 433
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 434 KNFMIQ 451
+ FMIQ
Sbjct: 65 QGFMIQ 70
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 88.2 bits (209), Expect = 1e-18
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +1
Query: 508 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKL 687
FEDENF+LKH LSMANAG +TNGSQFFITTV TP LDG+HVVFGKV++G V+ +
Sbjct: 86 FEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTI 145
Score = 60.5 bits (140), Expect = 2e-10
Identities = 37/84 (44%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +2
Query: 275 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 442
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 443 MIQXXXXXXXXXXXXRSIYGERLK 514
M+Q SIYGE+ +
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFE 87
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 79.4 bits (187), Expect = 5e-16
Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 508 FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQK 684
F+DE + L H GAG LSMANAG +TN SQFFIT TPWLDG+H +FG+V+ G+ V ++
Sbjct: 72 FDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKR 131
Query: 685 L 687
+
Sbjct: 132 M 132
Score = 43.2 bits (97), Expect = 4e-05
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +2
Query: 308 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 487
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQ-GGDPTGTGRGG 64
Query: 488 RSIYGER 508
SIYG++
Sbjct: 65 TSIYGDK 71
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 73.3 bits (172), Expect = 3e-14
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = +1
Query: 508 FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQK 684
FEDE + LKH +SMAN+G +TNGSQFFITT TPWLDG+H +F + G+DVV +
Sbjct: 525 FEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHR 584
Query: 685 L 687
+
Sbjct: 585 I 585
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +2
Query: 314 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 451
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ 506
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 60.5 bits (140), Expect = 2e-10
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +1
Query: 490 QYIW*T-FEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 663
Q IW F+DE LKH G +SMAN GK+TNGSQFFI LD +H +FG+V+
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVG 398
Query: 664 GMDVVQKL 687
G++V+ L
Sbjct: 399 GLNVLDAL 406
Score = 30.7 bits (66), Expect = 0.21
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +2
Query: 308 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 451
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQ 327
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 39.1 bits (87), Expect = 6e-04
Identities = 28/70 (40%), Positives = 34/70 (48%)
Frame = +2
Query: 314 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 493
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 494 IYGERLKMKT 523
IYGE ++T
Sbjct: 78 IYGEPFAVET 87
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 526 KLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL 660
+L+ G + MA + N SQFFIT TP +G+ +FG+V+
Sbjct: 90 RLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 32.3 bits (70), Expect = 0.068
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 302 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 451
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQ 52
Score = 30.7 bits (66), Expect = 0.21
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Frame = +1
Query: 520 NFKLKHYGAGWLSMANA---GKDTN----GSQFFIT-TVKTPWLDGRHVVFGKVLEGMDV 675
N L H G +SM+ A +D GSQF IT + LD R+ ++G+V EG D
Sbjct: 83 NPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQVAEGFDT 142
Query: 676 VQKL 687
+ K+
Sbjct: 143 LLKI 146
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 490 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 338
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 173 FSSFPCYFYKIRFECLFFQNLRY 105
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 248 NSQGPKVTHKVSFDMKIGDDNIGTIVI 328
+S+GP+ SFD+ +G+D +I I
Sbjct: 193 SSRGPQARRNTSFDVFVGEDIEASITI 219
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,836,336
Number of Sequences: 5004
Number of extensions: 57855
Number of successful extensions: 156
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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