Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20840
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.3  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    24   1.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.0  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   4.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   4.0  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   4.0  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   4.0  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   4.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.3  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 586 IDNQPAP*CFSLKFSSSKRSPYI 518
           + NQ +  CFSLK  + K  P++
Sbjct: 517 LGNQNSEMCFSLKLKNKKLPPFL 539


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 466 FMIQGGDFTKGDGT 507
           F I GGDF  G GT
Sbjct: 78  FWIHGGDFVTGSGT 91


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 331 DNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIK-NFMIQGGDFTKGDG 504
           DNI   +I  + K +     +  +  +K E   ++   FH++ K  ++++  D  K  G
Sbjct: 124 DNIVKPIIAFYYKPIKTLNGHEIKFIRKEEYISFESKVFHKLKKMKYLVEVQDEVKPRG 182


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 205 NEFSSFPCYFYKIRFE 158
           N+ SS P YFY++  E
Sbjct: 401 NKTSSVPIYFYRMSIE 416


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 205 NEFSSFPCYFYKIRFE 158
           N+ SS P YFY++  E
Sbjct: 401 NKTSSVPIYFYRMSIE 416


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 205 NEFSSFPCYFYKIRFE 158
           N+ SS P YFY++  E
Sbjct: 401 NKTSSVPIYFYRMSIE 416


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 205 NEFSSFPCYFYKIRFE 158
           N+ SS P YFY++  E
Sbjct: 401 NKTSSVPIYFYRMSIE 416


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 205 NEFSSFPCYFYKIRFE 158
           N+ SS P YFY++  E
Sbjct: 400 NKTSSVPIYFYRMSIE 415


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 223 YNGFRNFVVHRSAKSDEI 276
           YN   N +VHRS  S+++
Sbjct: 103 YNFTNNVLVHRSQNSNDV 120


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +1

Query: 379 KTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFT 492
           + T+N      K + +GYK   ++     + ++ G FT
Sbjct: 70  RKTDNSLSATSKKDKDGYKVVCYYTNWSQYRVKIGKFT 107


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 109 KPSQFTILLIRNNHTVLSLASSVE 38
           KP+ F++L      TVLSL ++ E
Sbjct: 71  KPALFSVLCEIKEKTVLSLRNTQE 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,006
Number of Sequences: 336
Number of extensions: 3622
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)