Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20840
(679 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 107 1e-23
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 93 2e-19
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 91 7e-19
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 87 2e-17
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 83 3e-16
09_06_0359 + 22508900-22509439 81 1e-15
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 77 1e-14
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 77 1e-14
02_01_0160 + 1116160-1116678 77 2e-14
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 75 7e-14
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 66 2e-11
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 66 3e-11
10_01_0309 + 3417602-3418147 64 7e-11
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 62 4e-10
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 56 2e-08
06_01_0214 + 1634171-1634173,1634263-1634742 55 5e-08
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 51 7e-07
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 49 3e-06
01_01_0077 - 585670-585787,585921-586687 44 1e-04
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 40 0.002
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 38 0.010
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 35 0.069
05_04_0435 - 21198234-21198379,21199012-21199030,21199093-211993... 29 2.6
11_05_0103 - 19083663-19083856,19083962-19084169,19084239-190843... 29 3.4
03_02_0241 - 6731004-6731078,6731200-6731409,6731503-6731632,673... 29 3.4
10_01_0310 + 3425099-3425218 29 4.5
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 107 bits (256), Expect = 1e-23
Identities = 65/150 (43%), Positives = 84/150 (56%), Gaps = 6/150 (4%)
Frame = +1
Query: 241 FVVHRSAKSDEIPKGPKVTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQ 411
FV +A E+ K+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCT 123
Query: 412 KPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEGAVYMVNVLKMKTSS*STMVLVGYLWL 591
+G GYKGS FHRVIK+FMIQGGDF KG+GT G K + +V G +
Sbjct: 124 GEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFK---LVHTGPGVV 180
Query: 592 MQAKTQMDLNFSSQLL---RHPGLDGRHVV 672
A + N S + + P LDGRHVV
Sbjct: 181 SMANAGPNTNGSQFFICTVKTPWLDGRHVV 210
Score = 81.8 bits (193), Expect = 5e-16
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G+SIYG F+DENFKL H G G +SMANAG +TNGSQFFI TVKTPW+ + FG
Sbjct: 157 GKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFG 212
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = +1
Query: 289 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 468
KV K FD+++G + G IVIGLFG+ VPKT +NF L +G GYKG FHR+IK+F
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDF 122
Query: 469 MIQGGDFTKGDGTEG 513
MIQGGDF +GT G
Sbjct: 123 MIQGGDFQNNNGTGG 137
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVK 641
GRSIYGE F+DENF LKH G G LSMANAG DTNGSQFFI TVK
Sbjct: 137 GRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVK 180
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/82 (56%), Positives = 55/82 (67%), Gaps = 7/82 (8%)
Frame = +1
Query: 289 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 447
+VTHKV FD++I G +V+GLFGKTVPKT ENF L +G G +KGS F
Sbjct: 48 EVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAF 107
Query: 448 HRVIKNFMIQGGDFTKGDGTEG 513
HR+I +FMIQGGDFT GDG G
Sbjct: 108 HRIIPSFMIQGGDFTLGDGRGG 129
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG +F DENFK+KH G G LSMANAG+DTNGSQFFITTV T W+ + FG
Sbjct: 129 GESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFG 184
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 86.6 bits (205), Expect = 2e-17
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Frame = +1
Query: 286 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSK 444
P VT++V D++I +IG IVIGL+G VPKT NF L EG G YKGS+
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 445 FHRVIKNFMIQGGDFTKGDGTEGAVYMVN 531
FHR+I FMIQGGD +GDG + M N
Sbjct: 94 FHRIIPGFMIQGGDIVRGDGKGSVIAMAN 122
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 579 LSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
++MAN+G D+NGSQF+ITT+KT W+ + FG
Sbjct: 118 IAMANSGPDSNGSQFYITTIKTSWLDGEHVVFG 150
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 82.6 bits (195), Expect = 3e-16
Identities = 55/140 (39%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Frame = +1
Query: 289 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 447
KVT KV FD+ I G IV+GLFG TVPKT ENF + +G G YKG+ F
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPF 96
Query: 448 HRVIKNFMIQGGDFTKGDGT-----EGAVYMVNVLKMKTSS*STMVLVGYLWLMQAKTQM 612
HR+I FMIQGGD G+GT G ++ K+ S+ + + Y AK
Sbjct: 97 HRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANY-----AKDTN 151
Query: 613 DLNFSSQLLRHPGLDGRHVV 672
F ++ LDG+HVV
Sbjct: 152 GSQFFITTVKLTRLDGKHVV 171
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = +3
Query: 516 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
SIYG F DENFK+ H G LSMAN KDTNGSQFFITTVK + + FG
Sbjct: 120 SIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFG 173
>09_06_0359 + 22508900-22509439
Length = 179
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 486 FYQG*WN*GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQT 665
F +G G SIYG+RF DENFKL+H G G LSMANAG +TNGSQFFI T +T W+ +
Sbjct: 76 FTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTTRTTWLDGKH 135
Query: 666 CCFG 677
FG
Sbjct: 136 VVFG 139
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 459
KV FD+ IG G +V+ LF TVPKT ENF L +G G YKGS FHR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 460 KNFMIQGGDFTKGDGTEG 513
NFM QGGDFT+G+GT G
Sbjct: 67 PNFMCQGGDFTRGNGTGG 84
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 77.0 bits (181), Expect = 1e-14
Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Frame = +1
Query: 277 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA---QKPEG--EGYKGS 441
P PK V FD+ IG G I + LF VPKT ENF Q + G +GYKG
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGC 89
Query: 442 KFHRVIKNFMIQGGDFTKGDGT 507
+FHRVIK+FMIQGGD+ KGDGT
Sbjct: 90 QFHRVIKDFMIQGGDYMKGDGT 111
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 516 SIYGERFEDENFKLKHYGAGWLSMANA 596
SIYG +F+DENF KH G G LSM +
Sbjct: 115 SIYGTKFDDENFIAKHTGPGLLSMVRS 141
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/56 (66%), Positives = 40/56 (71%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG FEDENF LKH G LSMANAG DTNGSQFFITT +TP + + FG
Sbjct: 126 GESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRTPHLDGKHVVFG 181
Score = 54.8 bits (126), Expect = 6e-08
Identities = 49/149 (32%), Positives = 63/149 (42%), Gaps = 29/149 (19%)
Frame = +1
Query: 313 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-------------------- 432
D+ IG D G IV+ L+ P+T ENF L +G
Sbjct: 38 DVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAASVCTR 97
Query: 433 --KGSKFHRVIKNFMIQGGDFTKGDGTEG-AVYMVN------VLKMKTSS*STMVLVGYL 585
KGS HR++K FM+QGGD T GDGT G ++Y +N VLK + +M G
Sbjct: 98 WTKGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAG-- 155
Query: 586 WLMQAKTQMDLNFSSQLLRHPGLDGRHVV 672
F R P LDG+HVV
Sbjct: 156 -----PDTNGSQFFITTTRTPHLDGKHVV 179
>02_01_0160 + 1116160-1116678
Length = 172
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 459
+V FDM +G G IV+ L+ K VP+T ENF L +G G YKGS FHRVI
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 460 KNFMIQGGDFTKGDGTEG 513
FM QGGDFT+G+GT G
Sbjct: 65 PEFMCQGGDFTRGNGTGG 82
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/64 (56%), Positives = 41/64 (64%)
Frame = +3
Query: 486 FYQG*WN*GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQT 665
F +G G SIYGE+F DE FK KH G LSMANAG +TNGSQFFI TV W+ +
Sbjct: 74 FTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFICTVPCSWLDGKH 133
Query: 666 CCFG 677
FG
Sbjct: 134 VVFG 137
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 74.5 bits (175), Expect = 7e-14
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG +FEDENF LKH G LSMAN+G +TNGSQFFITT +TP + + FG
Sbjct: 144 GESIYGLKFEDENFVLKHERKGMLSMANSGPNTNGSQFFITTTRTPHLDGKHVVFG 199
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 433 KGSKFHRVIKNFMIQGGDFTKGDGTEGAVYMVNVLKMKTSS*STMVLVGYLWLMQAKTQM 612
+GS FHRVIK FM+QGGD T GDGT G + LK + + + L A +
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGE--SIYGLKFEDEN-FVLKHERKGMLSMANSGP 174
Query: 613 DLNFSSQLL---RHPGLDGRHVV 672
+ N S + R P LDG+HVV
Sbjct: 175 NTNGSQFFITTTRTPHLDGKHVV 197
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +1
Query: 313 DMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 468
D+ IG + G IVI L+ VP+T ENF L +G G K H K+F
Sbjct: 31 DVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVGAVTGK-HLHYKDF 81
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/78 (47%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = +1
Query: 304 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 459
V D+ IGD+ +V LF P+T ENF L G G YKGS FHRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 460 KNFMIQGGDFTKGDGTEG 513
K FM QGGDF+ GDG+ G
Sbjct: 69 KGFMAQGGDFSNGDGSGG 86
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +3
Query: 486 FYQG*WN*GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFIT 632
F G + G SIYG FEDENF L+H G LSMANAG +TNGSQFFIT
Sbjct: 78 FSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFIT 126
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 GRSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G+SI+G FEDE K L+H LSMANAG +TNGSQFFITTV TPW+ + FG
Sbjct: 558 GQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFG 614
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = +1
Query: 334 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEG 513
++G I + L+ + PKT ENF + Y FHRVIK FMIQ GD GDGT G
Sbjct: 503 SMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQTGD-PLGDGTGG 558
>10_01_0309 + 3417602-3418147
Length = 181
Score = 64.5 bits (150), Expect = 7e-11
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Frame = +1
Query: 289 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKF 447
K +V D+ IG + +G +VI L VP T ENF +L ++ G YKGS F
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 448 HRVIKNFMIQGGDFTKGDGTEGAVYMVNVLKMKTSS*STMVLVGYLWLMQAKTQMDLNFS 627
HRV+ FM QGGD T G+GT G + + + G + A + N S
Sbjct: 68 HRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGS 127
Query: 628 SQLL---RHPGLDGRHV 669
+ + P LDGRHV
Sbjct: 128 QFFITVDKAPWLDGRHV 144
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +3
Query: 534 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
F DE F +KH G G +SMANAG +TNGSQFFIT K PW+ + FG
Sbjct: 100 FPDEGFAVKHDGPGVVSMANAGPNTNGSQFFITVDKAPWLDGRHVAFG 147
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/42 (73%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = +3
Query: 510 GRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFIT 632
G SIYG +FEDE +LKH GAG LSMANAG +TNGSQFFIT
Sbjct: 72 GESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFIT 113
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +1
Query: 328 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGT 507
+ ++G I ++ K PKT NF +L+++ Y FHR+IK+F++QGGD T G G
Sbjct: 15 ETSMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQGGDPT-GTGR 70
Query: 508 EG 513
G
Sbjct: 71 GG 72
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 GRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SI+G+ F+DE N KL H G G +SMAN+G TNGSQFFI P + ++ FG
Sbjct: 407 GESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFG 463
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/81 (40%), Positives = 38/81 (46%)
Frame = +1
Query: 271 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 450
++ K PK V GD N+ L P+T ENF E Y G FH
Sbjct: 336 KVEKNPKKKGYVQLHTTHGDLNLE-----LHCDITPRTCENFLTHC---ENGYYNGLIFH 387
Query: 451 RVIKNFMIQGGDFTKGDGTEG 513
R IKNFMIQGGD T G G+ G
Sbjct: 388 RSIKNFMIQGGDPT-GTGSGG 407
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +3
Query: 510 GRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTP 647
G SI+G++F DE LKH G +SMAN+G +TNGSQFFIT K P
Sbjct: 63 GTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQP 109
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 334 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEG 513
N+G I +F P+T ENF L Y G+ FHR IK FMIQGGD T G G G
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPT-GTGKGG 63
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 51.2 bits (117), Expect = 7e-07
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = +1
Query: 340 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEG 513
G + I L+ K PK NF QL EG Y G+ FHRVIK+F++QGGD T G GT G
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGGDPT-GSGTGG 75
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 510 GRSIYGERFEDE-NFKLKHYGAGWLSMANAGKD-TNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG F DE + +L+ G ++ ANAG +NGSQFFI+ + W+ + FG
Sbjct: 75 GESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFG 132
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 274 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------- 429
+PK K H V FD+ IG I LF VPKTTENF L G G
Sbjct: 1 MPKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLY 59
Query: 430 YKGSKFHRVIKNFMIQ 477
+KG+ HR++K FM Q
Sbjct: 60 FKGTNMHRILKGFMAQ 75
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 292 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 471
VT K D+ IG + G I IGLFG P F L G GY+ +F +++ ++
Sbjct: 73 VTAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEFVKIVPGYV 129
Query: 472 IQGG 483
GG
Sbjct: 130 QHGG 133
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 334 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEG 513
++G I + L P TT+NF +L + + Y G FH+V K+F+ Q GD T G G G
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQTGDPT-GTGAGG 63
Query: 514 -AVY 522
+VY
Sbjct: 64 DSVY 67
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Frame = +3
Query: 519 IYGE--RFEDENFK--LKHYGAGWLSMANAGKDTNGSQFFIT 632
+YG+ RF D+ + L+H G ++MA+AG++ N SQF+IT
Sbjct: 70 LYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYIT 111
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 340 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDF 489
G+I I ++ + F L + +KG F VIKNF+IQGGDF
Sbjct: 103 GSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQGGDF 149
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 34.7 bits (76), Expect = 0.069
Identities = 16/34 (47%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Frame = +3
Query: 534 FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFIT 632
F+DE + +L+H G ++MA+AG++ N SQF+IT
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYIT 141
>05_04_0435 -
21198234-21198379,21199012-21199030,21199093-21199302,
21199393-21199522,21199625-21199795,21199931-21200053,
21200185-21200289,21200412-21201124
Length = 538
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 217 YPYNGFRNFVVHRSAKSDEIPKGPKVTHKVS-FDMK--IGDDN--IGTIVIGLFGKTVPK 381
Y + G VVHR KS I + KVS F + +G DN + T V+G FG P+
Sbjct: 317 YLHEGLEPKVVHRDIKSSNILLDKRWNPKVSDFGLAKLLGSDNNYVTTRVMGTFGYVAPE 376
>11_05_0103 -
19083663-19083856,19083962-19084169,19084239-19084323,
19084591-19084865
Length = 253
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 522 YGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRW 659
+ +RF E L+ + G + KD G ++++ + PWV W
Sbjct: 114 FQQRFGMEIVGLEWWAVGHMVKRPDNKDNKGLEWWVKEIVGPWVTW 159
>03_02_0241 -
6731004-6731078,6731200-6731409,6731503-6731632,
6731719-6731889,6731991-6732113,6732238-6732342,
6732483-6732490
Length = 273
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +1
Query: 217 YPYNGFRNFVVHRSAKSDEIPKGPKVTHKVS-FDM-KI---GDDNIGTIVIGLFGKTVPK 381
Y + G VVHR KS I K KVS F M K+ G + T V+G FG P+
Sbjct: 82 YLHEGLEPKVVHRDIKSSNILLDKKWNPKVSDFGMAKVLGSGSSYVTTRVMGTFGYVAPE 141
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 340 GTIVIGLFGKTVPKTTENF 396
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,112,717
Number of Sequences: 37544
Number of extensions: 334299
Number of successful extensions: 684
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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