Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20840
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    29   0.18 
AY748836-1|AAV28184.1|   89|Anopheles gambiae cytochrome P450 pr...    23   6.7  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   8.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = -2

Query: 339  NIVITNLHVKAHLMSNFRSFGNFIRFGTTMNNKIPKAIVRVPMIKTSLVRFLAIFTKFVS 160
            N+V+ NL + A L+SNF S            NKI +A  R+      +   LA   KFV 
Sbjct: 1018 NLVVLNLFL-ALLLSNFGSSSLSAPTADNETNKIAEAFNRISRFSNWIKMNLANALKFVK 1076

Query: 159  N 157
            N
Sbjct: 1077 N 1077


>AY748836-1|AAV28184.1|   89|Anopheles gambiae cytochrome P450
           protein.
          Length = 89

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 142 NLRYKIRNLI*KPSQFTILL 83
           N+RY+ RNLI +P    +LL
Sbjct: 2   NIRYRERNLIKRPDFIHLLL 21


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -2

Query: 285 SFGN-FIRFGTTMNNKIPKAIVRVPMIKTSL 196
           + GN F +FGT  +N   +    VPM +T+L
Sbjct: 486 TMGNLFGQFGTGFSNAATQPNASVPMFETNL 516


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,484
Number of Sequences: 2352
Number of extensions: 13255
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)