Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20840
(679 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 102 3e-22
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 100 1e-21
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 93 1e-19
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 91 8e-19
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 89 2e-18
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 81 5e-16
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 81 9e-16
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 81 9e-16
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 76 2e-14
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 75 4e-14
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 75 6e-14
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 73 1e-13
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 73 1e-13
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 71 5e-13
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 70 1e-12
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 68 5e-12
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 66 3e-11
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 58 4e-09
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 56 3e-08
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 54 1e-07
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 46 3e-05
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 45 5e-05
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 45 5e-05
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 42 3e-04
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 41 9e-04
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 41 9e-04
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 41 9e-04
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 37 0.014
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 30 1.2
At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl methyl... 28 4.9
At4g01970.1 68417.m00262 galactinol-raffinose galactosyltransfer... 28 4.9
At3g13380.1 68416.m01683 leucine-rich repeat family protein / pr... 27 8.6
At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putat... 27 8.6
At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putat... 27 8.6
At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putat... 27 8.6
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 102 bits (244), Expect = 3e-22
Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 SAKSDE-IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY 432
+A+ +E I KVT+KV FD++IG + G IV+GLFG+ VPKT ENF L + GY
Sbjct: 80 AAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGY 139
Query: 433 KGSKFHRVIKNFMIQGGDFTKGDGTEG 513
KGS FHR+IK+FMIQGGDFT+G+GT G
Sbjct: 140 KGSSFHRIIKDFMIQGGDFTEGNGTGG 166
Score = 80.6 bits (190), Expect = 9e-16
Identities = 40/64 (62%), Positives = 45/64 (70%)
Frame = +3
Query: 486 FYQG*WN*GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQT 665
F +G G SIYG +FEDENF LKH G G LSMANAG +TNGSQFFI TVKT W+ +
Sbjct: 158 FTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKH 217
Query: 666 CCFG 677
FG
Sbjct: 218 VVFG 221
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 100 bits (239), Expect = 1e-21
Identities = 66/156 (42%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Frame = +1
Query: 217 YPYNGFRNFVVHRSAKSDEIPKGPKVTHKVSFDMKIGDDN---IGTIVIGLFGKTVPKTT 387
Y R F V +A+ P+ K+THKV FD+ +G+ G IVIGL+G VP+T
Sbjct: 64 YTKRNHRCFSVQSNAEVVTEPQS-KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTV 122
Query: 388 ENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEGAVYMVNVLKMKTSS*STM 567
ENF L +G GYKGS FHRVI++FMIQGGDF KG+GT G K + S
Sbjct: 123 ENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLS-H 181
Query: 568 VLVGYLWLMQAKTQMD-LNFSSQLLRHPGLDGRHVV 672
V G L + A + F ++ LDGRHVV
Sbjct: 182 VGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVV 217
Score = 80.6 bits (190), Expect = 9e-16
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +3
Query: 486 FYQG*WN*GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQT 665
F +G G+S+YG F+DENFKL H G G LSMANAG +TNGSQFFI T+KT W+ +
Sbjct: 156 FEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRH 215
Query: 666 CCFG 677
FG
Sbjct: 216 VVFG 219
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 93.5 bits (222), Expect = 1e-19
Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 7/82 (8%)
Frame = +1
Query: 289 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 447
+VTHKV FD++I + G +VIGLFGK VPKT ENF L +G G YKGSKF
Sbjct: 29 EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKF 88
Query: 448 HRVIKNFMIQGGDFTKGDGTEG 513
HR+I +FMIQGGDFT G+G G
Sbjct: 89 HRIIPSFMIQGGDFTHGNGMGG 110
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG++F DENFKLKH G G LSMAN+G+DTNGSQFFITTV T W+ + FG
Sbjct: 110 GESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFG 165
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 90.6 bits (215), Expect = 8e-19
Identities = 60/139 (43%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Frame = +1
Query: 289 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 447
++THKV FD++I G IV+GLFGKTVPKT ENF L +G G YKGS F
Sbjct: 32 EITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSF 91
Query: 448 HRVIKNFMIQGGDFTKGDGTEG-AVYMVNVLKMKTSS*STMVLVGYLWLMQAKTQMDLN- 621
HR+I +FM+QGGDFT G+G G ++Y T G +L A D N
Sbjct: 92 HRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHT----GPGFLSMANAGQDTNG 147
Query: 622 --FSSQLLRHPGLDGRHVV 672
F + LDGRHVV
Sbjct: 148 SQFFITTVTTSWLDGRHVV 166
Score = 88.6 bits (210), Expect = 3e-18
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYGE+F DENFKLKH G G+LSMANAG+DTNGSQFFITTV T W+ + FG
Sbjct: 113 GESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFG 168
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 89.0 bits (211), Expect = 2e-18
Identities = 45/81 (55%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Frame = +1
Query: 292 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFH 450
VTHKV FD++I G I+IGLFG VPKT ENF L +G G +KGS FH
Sbjct: 57 VTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFH 116
Query: 451 RVIKNFMIQGGDFTKGDGTEG 513
R+I FMIQGGDFT+GDG G
Sbjct: 117 RIIPGFMIQGGDFTRGDGRGG 137
Score = 83.8 bits (198), Expect = 9e-17
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = +3
Query: 486 FYQG*WN*GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQT 665
F +G G SIYG++F DENFKLKH G G+LSMAN+G D+NGSQFFITTV T W+
Sbjct: 129 FTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHH 188
Query: 666 CCFG 677
FG
Sbjct: 189 VVFG 192
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 81.4 bits (192), Expect = 5e-16
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = +3
Query: 486 FYQG*WN*GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQT 665
F +G G SIYG +FEDENFKLKH G G LSMAN+G +TNGSQFFI T KT W+ +
Sbjct: 74 FTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKH 133
Query: 666 CCFG 677
FG
Sbjct: 134 VVFG 137
Score = 70.5 bits (165), Expect = 9e-13
Identities = 37/78 (47%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 459
KV FD+ IG G +V+ LF P+T NF L G G YKGS FHR+I
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 460 KNFMIQGGDFTKGDGTEG 513
FM QGGDFT+G+GT G
Sbjct: 65 PGFMCQGGDFTRGNGTGG 82
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 80.6 bits (190), Expect = 9e-16
Identities = 37/56 (66%), Positives = 42/56 (75%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI TVKT W+ + FG
Sbjct: 82 GESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFG 137
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/78 (51%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 459
KV FDM I G IV+ L+ P+T ENF L +G G +KGSKFHRVI
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 460 KNFMIQGGDFTKGDGTEG 513
NFM QGGDFT G+GT G
Sbjct: 65 PNFMCQGGDFTAGNGTGG 82
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = +3
Query: 486 FYQG*WN*GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQT 665
F +G G SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI TVKT W+ +
Sbjct: 75 FTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKH 134
Query: 666 CCFG 677
FG
Sbjct: 135 VVFG 138
Score = 77.0 bits (181), Expect = 1e-14
Identities = 42/78 (53%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 459
KV FDM IG G IV+ L+ PKT ENF L +G G +KGS FHRVI
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 460 KNFMIQGGDFTKGDGTEG 513
NFM QGGDFTKG+GT G
Sbjct: 66 PNFMCQGGDFTKGNGTGG 83
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 75.8 bits (178), Expect = 2e-14
Identities = 40/78 (51%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 459
KV FDM +G + G IV+ L+ T P+T ENF L G G YKGS FHRVI
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 460 KNFMIQGGDFTKGDGTEG 513
FM QGGDFT G+GT G
Sbjct: 66 PKFMCQGGDFTAGNGTGG 83
Score = 74.9 bits (176), Expect = 4e-14
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG +F+DENF KH G G LSMANAG +TNGSQFFI T KT W+ + FG
Sbjct: 83 GESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFG 138
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 74.9 bits (176), Expect = 4e-14
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG +F+DENF KH GAG LSMAN+G +TNGSQFFI T KT W+ + FG
Sbjct: 82 GESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFG 137
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/78 (47%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 459
+V FDM + IG I + LF T P T ENF L +G G +KGS FHRVI
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 460 KNFMIQGGDFTKGDGTEG 513
FM QGGDFT +GT G
Sbjct: 65 PGFMCQGGDFTAKNGTGG 82
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 74.5 bits (175), Expect = 6e-14
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Frame = +1
Query: 232 FRNFVVHRSAKSDE--IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQL 405
F F + + K +E + + ++T++V D+ I +G IVIGL+G VPKT ENF L
Sbjct: 23 FLVFALFNTGKDEEKQVIEDHEITNRVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRAL 82
Query: 406 AQKPEGE-------GYKGSKFHRVIKNFMIQGGDFTKGDG 504
+G+ YKG+ FHR+I F+IQGGD GDG
Sbjct: 83 CTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDG 122
Score = 70.5 bits (165), Expect = 9e-13
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = +3
Query: 516 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
SIYG F DENFK++H AG ++MAN G D+NGSQFFITTVK W+ + G
Sbjct: 127 SIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLG 180
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 73.3 bits (172), Expect = 1e-13
Identities = 41/83 (49%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Frame = +1
Query: 289 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 444
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 445 FHRVIKNFMIQGGDFTKGDGTEG 513
FHRVIK FM QGGDF+ G+GT G
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGG 86
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG +F DENF+L H GAG LSMAN G +TNGSQFFI + P + + FG
Sbjct: 86 GESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFG 141
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 73.3 bits (172), Expect = 1e-13
Identities = 41/83 (49%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Frame = +1
Query: 289 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 444
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 445 FHRVIKNFMIQGGDFTKGDGTEG 513
FHRVIK FM QGGDF+ G+GT G
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGG 86
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG +F DENF+L H GAG LSMAN G +TNGSQFFI + P + + FG
Sbjct: 86 GESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFG 141
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 71.3 bits (167), Expect = 5e-13
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG +F+DENF+LKH G LSMAN+G +TNGSQFFITT +T + + FG
Sbjct: 83 GESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFG 138
Score = 70.1 bits (164), Expect = 1e-12
Identities = 39/79 (49%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRV 456
K D+ IG + G IVI L+ VPKT ENF L +G G YKG++FHRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 457 IKNFMIQGGDFTKGDGTEG 513
IK FMIQGGD + DGT G
Sbjct: 65 IKGFMIQGGDISANDGTGG 83
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/54 (59%), Positives = 37/54 (68%)
Frame = +3
Query: 516 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
SIYG +FEDENF KH G G LSMAN+G +TNG QFFIT K W+ + FG
Sbjct: 110 SIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFG 163
Score = 65.3 bits (152), Expect = 4e-11
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = +1
Query: 277 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEGE--GYKGS 441
P PK V FD+ IG G I + LF PKT ENF Q + G+ GYK
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKEC 84
Query: 442 KFHRVIKNFMIQGGDFTKGDGT 507
+FHRVIK+FM+Q GDF K DG+
Sbjct: 85 QFHRVIKDFMVQSGDFLKNDGS 106
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 GRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG +FEDE N +LKH GAG LSMANAG +TNGSQFFIT P + + FG
Sbjct: 72 GESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFG 128
Score = 47.6 bits (108), Expect = 8e-06
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +1
Query: 328 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGT 507
+ ++G + ++ K P+T NF +L+++ Y FHR++K+F++QGGD T G G
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQGGDPT-GTGR 70
Query: 508 EGAVYMVNVLKMKTSS*STMVLVGYLWLMQAKTQMD-LNFSSQLLRHPGLDGRHVV 672
G + + + + G L + A + F L P LDG+H +
Sbjct: 71 GGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTI 126
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 GRSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G+SI+G FEDE K L+H LSMANAG +TNGSQFFITTV TPW+ + FG
Sbjct: 538 GQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFG 594
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/59 (44%), Positives = 32/59 (54%)
Frame = +1
Query: 337 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEG 513
+G I + L+ + PKT ENF + Y FHRVI+ FMIQ GD GDGT G
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQTGD-PLGDGTGG 538
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 GRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SI+G++F DE LKH G LSMAN+G +TNGSQFFIT K P + FG
Sbjct: 63 GTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFG 119
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/60 (48%), Positives = 33/60 (55%)
Frame = +1
Query: 334 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEG 513
N+G I +F VPK+ ENF L Y G+ FHR IK FMIQGGD KG G G
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQGGD-PKGTGKGG 63
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Frame = +1
Query: 289 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 444
K +V D+ I D T+V LF + PKT+ENF L +G G YKGS
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSF 63
Query: 445 FHRVIKNFMIQGGDFTKGDGTEG 513
FHR++K Q GDF +GT G
Sbjct: 64 FHRIMKGSSAQAGDFVNRNGTAG 86
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3
Query: 510 GRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFIT 632
G SIY +F DE+ KL+H G LSM+ A +D GS F IT
Sbjct: 86 GESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHIT 126
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 GRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWVRWQTCCFG 677
G SI+G+ F+DE N KL H G G +SMAN+G TNGSQFF+ + ++ FG
Sbjct: 406 GESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFG 462
Score = 48.8 bits (111), Expect = 3e-06
Identities = 41/116 (35%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Frame = +1
Query: 178 NSKETN*TRFNHGYPYNGFRNFVVHRSAKSD----EIPKGPKVTHKVSFDMKIGDDNIGT 345
NSK +R++ G F + K+D ++ K PK V F GD NI
Sbjct: 301 NSKMVK-SRYSSGAASRSFTSSAFTPVTKNDFELIKVEKNPKKKGYVQFQTTHGDLNIE- 358
Query: 346 IVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEG 513
L P+ ENF L ++ Y G FHR I+NFMIQGGD T G G G
Sbjct: 359 ----LHCDIAPRACENFITLCERGY---YNGVAFHRSIRNFMIQGGDPT-GTGKGG 406
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 340 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQGGDFTKGDGTEG 513
G I + L+ K PK+ NF QL EGY + FHRVI F++QGGD T G GT G
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPT-GSGTGG 75
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 510 GRSIYGERFEDE-NFKLKHYGAGWLSMANAGK-DTNGSQFFITTVKTPWVRWQTCCFG 677
G SIYG F DE + +L+ G ++MANA ++NGSQFF T K W+ + FG
Sbjct: 75 GDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFG 132
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 459
KV FD+ + G IVI LF P+T ENF L G G YKGS F ++
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 460 KNFMIQGGD 486
+ M GGD
Sbjct: 65 PDLMWCGGD 73
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +1
Query: 295 THKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMI 474
T K D+ I + IG I+IGL+G VP T F + G Y+ F +++ ++
Sbjct: 91 TKKAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQ 150
Query: 475 QGGDFTKGDGTEGAVYMVNVLK 540
GG + G E A V L+
Sbjct: 151 HGGIRSYGVDAERATAAVGSLQ 172
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 328 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQGGDFTKGDG 504
D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ GD + D
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQAGDSAEFDA 138
Query: 505 TE 510
+
Sbjct: 139 VK 140
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 340 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGG 483
G I + LF + P+ + F L QK + +KG F RVIKN+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAG 134
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 340 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGG 483
G I + LF + P+ + F L QK + +KG F RVIKN+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAG 134
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 340 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGG 483
G I + LF + P+ + F L QK + +KG F RVIKN+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAG 134
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = +1
Query: 334 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQGGDFTKGDGTEG 513
++G IVI L P T +NF +L + + Y G FH V K+F Q GD T G G G
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQTGDPT-GTGAGG 63
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Frame = +3
Query: 519 IYGER---FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFIT 632
+YGE+ ++DE + LKH G ++MA+ G++ N SQF+ T
Sbjct: 70 LYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFT 111
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 337 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRV 456
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123
>At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 354
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 516 SIYGERFEDENFKLKH--YGAGWLSMANAGKDTNGSQFFITTVKTP 647
S Y F ++ H Y WLS G + N S +ITT P
Sbjct: 123 SFYSRLFPRKSLHFVHSSYSLHWLSKVPKGLEKNSSSVYITTSSPP 168
>At4g01970.1 68417.m00262 galactinol-raffinose
galactosyltransferase, putative similar to
galactinol-raffinose galactosyltransferase GI:6634701
from [Vigna angularis]
Length = 807
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 546 FHLQNVHHIYCALSSITLGKITTLDHEIF 460
+ LQ VH I+C+ +SI +G++ D ++F
Sbjct: 507 YWLQGVHMIHCSYNSIWMGQMIQPDWDMF 535
>At3g13380.1 68416.m01683 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1164
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = +1
Query: 457 IKNFMIQGGDFTKGDGTEGAVYMVNVLKMKTSS*STMVLVGYLWLMQAKTQMDLNFSSQL 636
+++ +QG +F+ GD + + + VL + ++S + +V Y++ + +NFS
Sbjct: 103 LRSLYLQGNNFSSGDSSSSSGCSLEVLDLSSNSLTDSSIVDYVF-STCLNLVSVNFSHNK 161
Query: 637 L 639
L
Sbjct: 162 L 162
>At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 268 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 444
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 445 FHRV 456
F R+
Sbjct: 429 FPRI 432
>At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 268 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 444
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 445 FHRV 456
F R+
Sbjct: 429 FPRI 432
>At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 268 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 444
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 445 FHRV 456
F R+
Sbjct: 429 FPRI 432
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,312,677
Number of Sequences: 28952
Number of extensions: 292055
Number of successful extensions: 747
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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