Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20838
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 30 0.34
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 27 1.8
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 2.4
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 27 2.4
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 27 2.4
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 27 2.4
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 27 3.2
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 27 3.2
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 27 3.2
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 26 5.6
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 26 5.6
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 5.6
SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme... 26 5.6
SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak... 25 7.4
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 25 7.4
SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces ... 25 7.4
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 29.9 bits (64), Expect = 0.34
Identities = 22/105 (20%), Positives = 53/105 (50%)
Frame = +1
Query: 64 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLK 243
K P +E P V L+ + I +I +++ + ++ +V++ P + ++ +I+ +
Sbjct: 377 KAPTSEAPPKGHVKQLAKQLGNIYMPQSINNVEPTSHSSISKVVN-PSEKVISKIERACL 435
Query: 244 SDLETLKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLK 378
+ + +KM K+ L P PR++ +T+H+I + ++ K
Sbjct: 436 AGNGNVHPSIKMEKNLEL-----NPHPRTLNATEHKINSRIQVSK 475
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 27.5 bits (58), Expect = 1.8
Identities = 26/107 (24%), Positives = 44/107 (41%)
Frame = +1
Query: 64 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLK 243
++ E E V+D E+EL +K +N ++ E+ P + + K
Sbjct: 646 EIEELEPVVQKVLDEEKQERELKIAERDLKKGENIMKYGD-EIRSRPARTWFQSEKDKQA 704
Query: 244 SDLETLKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLKKS 384
S K + + K + E+P R+ K TK+ L+ K KKS
Sbjct: 705 SKASEAKDKKSLAKRKKQMEKEEVP--RAYKKTKNDRLSNKKSTKKS 749
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 112 SSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLETLK 264
S+ +EL+D+ KD+ +A K EV+D+ VK E+++ KS+ E K
Sbjct: 465 STYKELMDRVQN-KDLLCQEQARKLEVLDLNVKSSREQLQYVSKSNQEHKK 514
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = -2
Query: 550 LLYLSAEIFLEMLQLAWSSLICSVRAY---HFPIPSDTS 443
L L AEI LE LQ +W L C A HF I D+S
Sbjct: 3894 LFSLDAEISLEKLQNSWKRL-CQKNAILRTHFAISEDSS 3931
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 282 EIKRPLVDLRNPGPPQHQEHETQNPEHHEDA--EKIVSSVKNDINTAE 419
E +P D RN GP Q + + + PE H ++ E+ + + ++ N E
Sbjct: 148 EEPKPSGDFRNEGPKQCDDSKIEKPELHVNSKIEEPIHRIDSEHNEPE 195
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 381 IVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASCNISKK 527
+V +KND T E + + SDG Y R + I+ QAS N S +
Sbjct: 1 MVEELKNDAQTNEE--ESEYSDFSDGSDNDYFREDDIDWNQASSNYSAR 47
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 372 AEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASCNISKK 527
A K S+ + D N +EI + + +W + TEQ+ ELQ SC S +
Sbjct: 556 ALKFSSNDQKDDNVSEIPT-ESLEYKKLRCLRWKSLTEQVVELQPSCKSSSQ 606
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 324 PQHQEHETQNPEHHEDAEKIVSSVKNDIN 410
P +++ T++ E HED + V +++D N
Sbjct: 24 PNNKKSRTRSTESHEDRQAKVQKIQSDFN 52
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 313 IPGPRSIKSTKHRILNTTKMLKKSFLPSKMTLTQRK 420
+P P S+ HR LN K+ F P + T++K
Sbjct: 224 LPSPVSLSRYMHRSLNWKKLYDIGFAPFPLGSTEKK 259
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Frame = +1
Query: 94 NVVDNLSSEQE--------LIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEI 228
NVVD+LS EQE L DQ N + NSLR+ +P + V++I
Sbjct: 137 NVVDDLSKEQESRKESAPQLYDQINAFIEKVNSLRSG-----SVPFTITVDDI 184
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +3
Query: 321 PPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQ 488
PP H ++ TQ HEDA+ S + + I R ++ G + EQ
Sbjct: 609 PPLHLKNTTQTNNAHEDAQSSNLSQNHSLFYERIPQRPSYRIEKQNKGIYEDENEQ 664
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 25.8 bits (54), Expect = 5.6
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +1
Query: 58 PDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD----IDN----SLRANKKEVIDIPVKV 213
PD A + L++ DN+SS NTI + ID+ +L N +++ + + +
Sbjct: 434 PDSYLAAPKERLSISDNMSSSSSQTATVNTISNYLNVIDSVREIALTVNDEKIYGLAISL 493
Query: 214 IVEEIKPSLKSDLET 258
++++ S + T
Sbjct: 494 LIQKFSRKFDSRVST 508
>SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme
Spe2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -2
Query: 649 PIRLFQKKLYFAFPRQKGRDGVSWFNKM*RFIQLLYLS 536
P+R+F + F +P ++ SW ++ R++QL + S
Sbjct: 123 PLRIFYSRKNFLYPERQLAPHTSWEEEV-RYLQLFFPS 159
>SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 708
Score = 25.4 bits (53), Expect = 7.4
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +3
Query: 291 RPLVDLRNPGPPQHQEHE--TQNPEHHEDAEKIVSSVKNDI---NTAEIALRQGFQEVSD 455
RPL++LR P P E + +N ++ + I+ S + N+ ++ GF++ ++
Sbjct: 597 RPLINLRQPKPLLRSEADCIIKNLQNFSTDDLIIKSNEKFTAAKNSLINVIKSGFEQ-NE 655
Query: 456 GIGKWYARTEQINELQASC 512
I ++ +T + L C
Sbjct: 656 FINPYFLQTNYLKNLLCCC 674
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 7 RGPVANYIRARRTRXSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRAN 180
+G N +R +IP + A P N+SS +NTI ++D++L+A+
Sbjct: 222 KGLEMNGFSKKRDNVNIPKRTYSARSIP----SNISSTNVATTPSNTIFEMDDTLKAD 275
>SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 199
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 316 PGPRSIKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTV 459
P + + K I +K++ + LP+ +T Q K LFVK+ C+ V
Sbjct: 39 PAVNTASALKSVISEESKIIVSN-LPTDVTEAQVKELFVKSIGPCKRV 85
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,377,535
Number of Sequences: 5004
Number of extensions: 45596
Number of successful extensions: 196
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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