Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20838
         (662 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027561-1|BAB55198.1|  819|Homo sapiens protein ( Homo sapiens ...    33   0.91 
AK124538-1|BAC85878.1|  256|Homo sapiens protein ( Homo sapiens ...    32   1.6  
BC110537-1|AAI10538.1|  819|Homo sapiens IWS1 homolog (S. cerevi...    32   2.1  
BC110536-1|AAI10537.1|  819|Homo sapiens IWS1 homolog (S. cerevi...    32   2.1  
BC065279-1|AAH65279.1|  375|Homo sapiens IWS1 protein protein.         32   2.1  
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.     32   2.1  

>AK027561-1|BAB55198.1|  819|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14655 fis, clone NT2RP2002292. ).
          Length = 819

 Score = 33.1 bits (72), Expect = 0.91
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 165 QPPREQKXXXXXXXXXXXXXNQTVVEE*FRNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 341
           +PP+ +              + +  EE  R+     ENEE+ RP + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPRPRISDSESEDPPRHQAS 261

Query: 342 ETQNPE 359
           +++N E
Sbjct: 262 DSENEE 267


>AK124538-1|BAC85878.1|  256|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42547 fis, clone BRACE3004880. ).
          Length = 256

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
 Frame = -1

Query: 230 LISSTITLTGMSMTSFLFARRLLSMSLMVLAWS---MSSCSLDKLSTTFKGLSSASGTLS 60
           L S T++  G+S T+ LFA RL S+++   + S   +S+C L +++ +  GLSS + +  
Sbjct: 118 LSSMTLSACGLSSTT-LFACRLSSVTVSTCSLSSVTLSACGLSRVTLSACGLSSMTPSAC 176

Query: 59  GM 54
           G+
Sbjct: 177 GL 178


>BC110537-1|AAI10538.1|  819|Homo sapiens IWS1 homolog (S.
           cerevisiae) protein.
          Length = 819

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 165 QPPREQKXXXXXXXXXXXXXNQTVVEE*FRNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 341
           +PP+ +              + +  EE  R+     ENEE+ +P + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 342 ETQNPE 359
           +++N E
Sbjct: 262 DSENEE 267


>BC110536-1|AAI10537.1|  819|Homo sapiens IWS1 homolog (S.
           cerevisiae) protein.
          Length = 819

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 165 QPPREQKXXXXXXXXXXXXXNQTVVEE*FRNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 341
           +PP+ +              + +  EE  R+     ENEE+ +P + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 342 ETQNPE 359
           +++N E
Sbjct: 262 DSENEE 267


>BC065279-1|AAH65279.1|  375|Homo sapiens IWS1 protein protein.
          Length = 375

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 165 QPPREQKXXXXXXXXXXXXXNQTVVEE*FRNVEVPDENEEIKRPLV-DLRNPGPPQHQEH 341
           +PP+ +              + +  EE  R+     ENEE+ +P + D  +  PP+HQ  
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 342 ETQNPE 359
           +++N E
Sbjct: 262 DSENEE 267


>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
          Length = 1967

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +3

Query: 279  EEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSD 455
            EE + P    +  G  + +E +    E  ++ E   SSVKN++   E+    G + +S+
Sbjct: 1414 EEPENPAAKEKCEGKEEEEETDGSGKESKQECEAEASSVKNELKGVEVGADTGSKSISE 1472


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,488,874
Number of Sequences: 237096
Number of extensions: 1640877
Number of successful extensions: 4930
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4920
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)