Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20838
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 29 2.2
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 29 2.9
U23484-14|AAC46763.1| 194|Caenorhabditis elegans Hypothetical p... 29 3.9
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 28 6.8
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 28 6.8
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 28 6.8
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 27 9.0
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 27 9.0
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 284 FLIFIRHFNVSKSLFNDGLISSTITLT--GMSMTSFLFARRLLSMSLMVLAWSMSSCSL 114
FL ++ F K++ L+ ITLT G +T FL +R++ +L S CSL
Sbjct: 25 FLCYLAIFQSPKAIRTYSLVLINITLTNVGACVTGFLLDQRIIQSGKSMLYVSYGYCSL 83
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 273 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 434
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 273 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 434
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -1
Query: 263 FNVSKSLFNDGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSLDKLSTTFKGL 84
F K LF + + + L+ ++T+ + LL S L + + + STT GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316
Query: 83 SSASGTLSG 57
+ SGT++G
Sbjct: 317 AYVSGTITG 325
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -1
Query: 263 FNVSKSLFNDGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSLDKLSTTFKGL 84
F K LF + + + L+ ++T+ + LL S L + + + STT GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316
Query: 83 SSASGTLSG 57
+ SGT++G
Sbjct: 317 AYVSGTITG 325
>U23484-14|AAC46763.1| 194|Caenorhabditis elegans Hypothetical
protein EEED8.3 protein.
Length = 194
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/112 (19%), Positives = 53/112 (47%)
Frame = +1
Query: 61 DKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSL 240
+ V E + + + DN + Q + + NT+K++ ++ +N+K+ + P++++ I
Sbjct: 17 EMVEEEKFEKIENTDNSENFQYVSTKGNTVKEV--NINSNEKKKKEAPIQILTAMIGKWK 74
Query: 241 KSDLETLKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRILNTTKMLKKSFLPS 396
+ E L+ + K + + G K +++ T +L KS +P+
Sbjct: 75 LASSENLQEYFTLEKFPEITQMAWEHGITCYKMNGNQLHVHTDLLGKSLIPT 126
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 318 GPPQHQEHETQNPEHHEDAEKIVSSVKN 401
GPP HQ+H Q +H+ A SS N
Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN 160
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 273 ENEEIKRPLVDLRNPGPPQHQEHETQNPE 359
EN+ + V+ + P P QHQ+ + Q PE
Sbjct: 404 ENQRYEGNFVEYQPPPPQQHQQQQPQAPE 432
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 46 RXSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIK-DIDNSLRANKKEVID 198
+ S P KVP A K + S+QEL ++ + D+ ++L +NKKE+ID
Sbjct: 489 KPSQPAKVPAAPIKAPRL-----SDQELESESQKLALDVISNLFSNKKEIID 535
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +3
Query: 231 TVVEE*FRNVEVPDENEEIKRPLVDLRNPGP----PQHQEHETQNPEHHEDAEKIVSSVK 398
TV+EE V V E EI+ P P P P+ +E + HED + S ++
Sbjct: 359 TVIEEHHNEVTVAPEAPEIQEPSEPATEPIPEPNEPKDEEIQRNEEMFHEDTSE--SHLE 416
Query: 399 NDINTA 416
+ NT+
Sbjct: 417 SSTNTS 422
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +3
Query: 231 TVVEE*FRNVEVPDENEEIKRPLVDLRNPGP----PQHQEHETQNPEHHEDAEKIVSSVK 398
TV+EE V V E EI+ P P P P+ +E + HED + S ++
Sbjct: 349 TVIEEHHNEVTVAPEAPEIQEPSEPATEPIPEPNEPKDEEIQRNEEMFHEDTSE--SHLE 406
Query: 399 NDINTA 416
+ NT+
Sbjct: 407 SSTNTS 412
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +3
Query: 231 TVVEE*FRNVEVPDENEEIKRPLVDLRNPGP----PQHQEHETQNPEHHEDAEKIVSSVK 398
TV+EE V V E EI+ P P P P+ +E + HED + S ++
Sbjct: 349 TVIEEHHNEVTVAPEAPEIQEPSEPATEPIPEPNEPKDEEIQRNEEMFHEDTSE--SHLE 406
Query: 399 NDINTA 416
+ NT+
Sbjct: 407 SSTNTS 412
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 55 IPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKP 234
+P+ PE +PL VV + L Q I + ++ + V++ V+V+ P
Sbjct: 126 VPESTPEPISEPLPVVQEEPASDSLTVQDEQIAQAEPAVEPEEPVVVE-HVEVVTASEDP 184
Query: 235 SLKS 246
+L+S
Sbjct: 185 TLES 188
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 315 PGPPQHQEHETQNPEHH 365
P PPQ Q + Q+P HH
Sbjct: 469 PPPPQQQHQQQQHPPHH 485
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 315 PGPPQHQEHETQNPEHH 365
P PPQ Q + Q+P HH
Sbjct: 794 PPPPQQQHQQQQHPPHH 810
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 315 PGPPQHQEHETQNPEHH 365
P PPQ Q + Q+P HH
Sbjct: 794 PPPPQQQHQQQQHPPHH 810
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 327 QHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQA 506
+HQ+HE Q + E+AEK + +K D+ EI + V + + K R E A
Sbjct: 567 EHQKHEDQT-DKSEEAEKKM-KIKADLAAKEIWDKNMEHNVDEILMKRVNRVEMCRIQMA 624
Query: 507 SCNISKKI 530
N+ +K+
Sbjct: 625 LQNLDQKL 632
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,268,735
Number of Sequences: 27780
Number of extensions: 263461
Number of successful extensions: 1252
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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