Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20837
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens ... 32 1.9
BC014009-1|AAH14009.2| 476|Homo sapiens GLTSCR2 protein protein. 30 7.6
BC010095-1|AAH10095.1| 478|Homo sapiens glioma tumor suppressor... 30 7.6
BC007248-1|AAH07248.1| 474|Homo sapiens glioma tumor suppressor... 30 7.6
BC006311-1|AAH06311.1| 478|Homo sapiens glioma tumor suppressor... 30 7.6
BC004229-1|AAH04229.2| 472|Homo sapiens GLTSCR2 protein protein. 30 7.6
AY535000-1|AAS46028.1| 478|Homo sapiens preS1 binding protein p... 30 7.6
AL359336-1|CAB94787.1| 467|Homo sapiens GLTSCR2, glioma tumor ... 30 7.6
AL359335-1|CAB94786.1| 459|Homo sapiens GLTSCR2, glioma tumor ... 30 7.6
AF182076-1|AAF62873.1| 478|Homo sapiens glioma tumor suppressor... 30 7.6
>AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ42547 fis, clone BRACE3004880. ).
Length = 256
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Frame = -2
Query: 234 LISSTITLTGMSMTSFLFARRLLSMSLMVLAWS---MSSCSLDKLSTTFKGLSSASGTLS 64
L S T++ G+S T+ LFA RL S+++ + S +S+C L +++ + GLSS + +
Sbjct: 118 LSSMTLSACGLSSTT-LFACRLSSVTVSTCSLSSVTLSACGLSRVTLSACGLSSMTPSAC 176
Query: 63 GM 58
G+
Sbjct: 177 GL 178
>BC014009-1|AAH14009.2| 476|Homo sapiens GLTSCR2 protein protein.
Length = 476
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 547
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 92 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 147
>BC010095-1|AAH10095.1| 478|Homo sapiens glioma tumor suppressor
candidate region gene 2 protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 547
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 94 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 149
>BC007248-1|AAH07248.1| 474|Homo sapiens glioma tumor suppressor
candidate region gene 2 protein.
Length = 474
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 547
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 90 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 145
>BC006311-1|AAH06311.1| 478|Homo sapiens glioma tumor suppressor
candidate region gene 2 protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 547
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 94 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 149
>BC004229-1|AAH04229.2| 472|Homo sapiens GLTSCR2 protein protein.
Length = 472
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 547
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 88 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 143
>AY535000-1|AAS46028.1| 478|Homo sapiens preS1 binding protein
protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 547
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 94 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 149
>AL359336-1|CAB94787.1| 467|Homo sapiens GLTSCR2, glioma tumor
suppressor candidate region protein 2 (AF182076_1)
protein.
Length = 467
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 547
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 83 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 138
>AL359335-1|CAB94786.1| 459|Homo sapiens GLTSCR2, glioma tumor
suppressor candidate region protein 2 (AF182076_1)
protein.
Length = 459
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 547
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 75 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 130
>AF182076-1|AAF62873.1| 478|Homo sapiens glioma tumor suppressor
candidate region protein 2 protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 380 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 547
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 94 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 149
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,263,179
Number of Sequences: 237096
Number of extensions: 1712127
Number of successful extensions: 4988
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4982
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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