Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20836
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.46 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.80 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.9  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 380 ELVSLSRGTDKSTEKSLERQFIQINILCVFMYF*LSYFTRLSMGM 514
           EL+  + G  ++  K L+  F  I +L + +YF L  F+RL+  +
Sbjct: 429 ELLVGNLGMRRNFRKKLDFIFTFITLLTIGLYFQLCEFSRLNFSV 473


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
 Frame = +1

Query: 382 VSVIIAWHRQVD*EKSRAPVY-TNKY-----IMCVHVFLIIVFYTSLDGYDN 519
           VS+++  H     +  R  V  TNKY     +  + VF+I+V+Y SLD   N
Sbjct: 296 VSLLLGPHPTYFGKTGRKTVLKTNKYCNFIILFYLSVFVILVYYASLDETPN 347


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = -3

Query: 163  GHSTPQCFERHFLFLPTEHMQRNVSRITCLGLDLLGTET*SPK 35
            GH  PQ       + P EHM     ++ C+G   L  +   PK
Sbjct: 1227 GHLVPQNCAPGLHYNPEEHMCDWKYKVKCVGRKQLAQKYQLPK 1269


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -3

Query: 622 YRLLRSTFYNTFLSLFFLIIYLKRQINSTVRLSI 521
           Y++ + T+    +SL   ++Y+   +  T +LSI
Sbjct: 40  YKIYKYTYNIVAVSLTAYMVYITTNLRITQKLSI 73


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 522 IDNLTVELIWRLRYIIKKK 578
           + N T +  WR+RY++  K
Sbjct: 250 VRNCTGDTSWRVRYMVADK 268


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 236 NFVVFKMTCVTYLNPSCRIRH 174
           NF  ++  CV   NP C + H
Sbjct: 476 NFEPWREKCVVEGNPHCWVPH 496


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 623 LSFTQKHFLQHIFITFFFNY 564
           +S++  HF+ +I   FFF +
Sbjct: 208 ISYSTLHFVNYIDDLFFFRF 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,049
Number of Sequences: 336
Number of extensions: 3464
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)