Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20835
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    27   0.17 
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    26   0.22 
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    24   0.90 
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    24   0.90 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   1.6  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   1.6  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   1.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   2.7  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   2.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.3  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.4  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 368 SSMLKVVTYLKDNFPSLWNSINRLYMPRG 282
           +++ KV+ +L DN P +W  +   Y P G
Sbjct: 79  ANVRKVLHHLIDNKPDMWKQLEAKYDPSG 107



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 119 QYLITDNTNEFHFLKNKRLL 60
           +Y+I DN +    L N+RLL
Sbjct: 19  EYVIPDNIDIDDILSNERLL 38


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 356 KVVTYLKDNFPSLWNSINRLYMPRG 282
           KV+ +L  N PS W  +   Y P+G
Sbjct: 84  KVIRHLIKNKPSWWQELQEKYDPKG 108


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 356 KVVTYLKDNFPSLWNSINRLYMPRGV 279
           KV+ YL    P  W  + + + P+G+
Sbjct: 83  KVIHYLVKQKPEWWEQLQKKFDPQGI 108


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 356 KVVTYLKDNFPSLWNSINRLY 294
           KV+ +++ N+P  WN I   Y
Sbjct: 90  KVLAFVQKNYPKEWNKILHQY 110


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 356 KVVTYLKDNFPSLWNSINRLYMPRGV 279
           KV+ +L  N   +W  +   Y P G+
Sbjct: 83  KVIHFLSHNKQQMWKELTAKYDPDGI 108


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 356 KVVTYLKDNFPSLWNSINRLYMPRG 282
           KV+ +L +N P+ W  +   + P+G
Sbjct: 85  KVIHHLIENKPNWWQELESKFDPQG 109


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 356 KVVTYLKDNFPSLWNSINRLYMPRG 282
           KV+ +L +N P+ W  +   + P+G
Sbjct: 85  KVIHHLIENKPNWWQELESKFDPQG 109


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 75  FQEVEFVRIVRNKIL 119
           FQ +EFV I+RN+ +
Sbjct: 176 FQTIEFVSIIRNRFV 190


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 353 VVTYLKDNFPSLWNSINRLYMPRGV 279
           ++ YL  N    WN +   Y P G+
Sbjct: 87  IIRYLIKNKRDWWNELEAKYDPTGI 111


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 353 VVTYLKDNFPSLWNSINRLYMPRGV 279
           ++ YL  N    WN +   Y P G+
Sbjct: 87  IIRYLIKNKRDWWNELEAKYDPTGI 111


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 489 FSGRVSTFEKLIQEAGGVH 545
           F G ++TF  ++ + GG+H
Sbjct: 371 FGGALTTFLVILFQYGGIH 389


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 329 FPSLWNSINRLYMPRGVPPVGRP 261
           +P  W S+ R   P+   P G P
Sbjct: 81  WPFAWGSLXRSSSPQTSAPTGPP 103


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 7   IIAKLFSFFIIQRKVILSSSLLFFKKW 87
           IIA     F I   +I+ +  LFF+ W
Sbjct: 255 IIATYDKQFYIHNALIVRALFLFFQLW 281


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 7   IIAKLFSFFIIQRKVILSSSLLFFKKW 87
           IIA     F I   +I+ +  LFF+ W
Sbjct: 251 IIATYDKQFYIHNALIVRALFLFFQLW 277


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 306 QPFVHAEGRPTGGQ 265
           QP+++A+  P GG+
Sbjct: 19  QPYMNAQDAPAGGE 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,562
Number of Sequences: 336
Number of extensions: 3193
Number of successful extensions: 31
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)