Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20835
(625 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122220-1|AAM52732.1| 273|Drosophila melanogaster LP11234p pro... 138 4e-33
AE014134-937|AAN10546.1| 273|Drosophila melanogaster CG6957-PB,... 138 4e-33
AE014134-936|AAF52263.1| 273|Drosophila melanogaster CG6957-PA,... 138 4e-33
Y09064-1|CAA70285.1| 509|Drosophila melanogaster succinate dehy... 29 5.1
AY051472-1|AAK92896.1| 661|Drosophila melanogaster GH13919p pro... 29 5.1
AE013599-2872|AAN16127.1| 661|Drosophila melanogaster CG17246-P... 29 5.1
AE013599-2871|AAM70849.1| 661|Drosophila melanogaster CG17246-P... 29 5.1
AE013599-2870|AAG22257.1| 661|Drosophila melanogaster CG17246-P... 29 5.1
BT010094-1|AAQ22563.1| 861|Drosophila melanogaster GH26833p pro... 29 6.8
BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p pro... 29 6.8
AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p pro... 29 6.8
AE014297-3842|AAO41604.1| 826|Drosophila melanogaster CG31092-P... 29 6.8
AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-P... 29 6.8
AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA... 29 6.8
AY070868-1|AAL48490.1| 111|Drosophila melanogaster HL03025p pro... 28 8.9
AE014296-3180|AAF49138.2| 111|Drosophila melanogaster CG9368-PC... 28 8.9
>AY122220-1|AAM52732.1| 273|Drosophila melanogaster LP11234p
protein.
Length = 273
Score = 138 bits (335), Expect = 4e-33
Identities = 58/79 (73%), Positives = 65/79 (82%)
Frame = +1
Query: 292 MYKRLIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVL 471
MYK LIEFHK+GK+SF+YV TFNMDEYVGL RDH ESYHY+MWN FFKHIDIEP N H+L
Sbjct: 48 MYKELIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHIL 107
Query: 472 DGNASDLVVECRPSRNSYR 528
DGNA+DLV EC + R
Sbjct: 108 DGNAADLVAECNKFEDQIR 126
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +3
Query: 510 FEKLIQEAGGVHLFIGGIGPDGHIAFNEPGSSLVSRTR 623
FE I+EAGGV LFIGGIGPDGHIAFNEPGSSLVSRTR
Sbjct: 121 FEDQIREAGGVELFIGGIGPDGHIAFNEPGSSLVSRTR 158
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 152 MRLIILEDASIVADWAARFVLQRITQFAPGPGRHSCWACPPVGRP 286
MRL+ILE + V WAA++V++RI F P R+ P P
Sbjct: 1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTP 45
>AE014134-937|AAN10546.1| 273|Drosophila melanogaster CG6957-PB,
isoform B protein.
Length = 273
Score = 138 bits (335), Expect = 4e-33
Identities = 58/79 (73%), Positives = 65/79 (82%)
Frame = +1
Query: 292 MYKRLIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVL 471
MYK LIEFHK+GK+SF+YV TFNMDEYVGL RDH ESYHY+MWN FFKHIDIEP N H+L
Sbjct: 48 MYKELIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHIL 107
Query: 472 DGNASDLVVECRPSRNSYR 528
DGNA+DLV EC + R
Sbjct: 108 DGNAADLVAECNKFEDQIR 126
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +3
Query: 510 FEKLIQEAGGVHLFIGGIGPDGHIAFNEPGSSLVSRTR 623
FE I+EAGGV LFIGGIGPDGHIAFNEPGSSLVSRTR
Sbjct: 121 FEDQIREAGGVELFIGGIGPDGHIAFNEPGSSLVSRTR 158
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 152 MRLIILEDASIVADWAARFVLQRITQFAPGPGRHSCWACPPVGRP 286
MRL+ILE + V WAA++V++RI F P R+ P P
Sbjct: 1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTP 45
>AE014134-936|AAF52263.1| 273|Drosophila melanogaster CG6957-PA,
isoform A protein.
Length = 273
Score = 138 bits (335), Expect = 4e-33
Identities = 58/79 (73%), Positives = 65/79 (82%)
Frame = +1
Query: 292 MYKRLIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVL 471
MYK LIEFHK+GK+SF+YV TFNMDEYVGL RDH ESYHY+MWN FFKHIDIEP N H+L
Sbjct: 48 MYKELIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHIL 107
Query: 472 DGNASDLVVECRPSRNSYR 528
DGNA+DLV EC + R
Sbjct: 108 DGNAADLVAECNKFEDQIR 126
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +3
Query: 510 FEKLIQEAGGVHLFIGGIGPDGHIAFNEPGSSLVSRTR 623
FE I+EAGGV LFIGGIGPDGHIAFNEPGSSLVSRTR
Sbjct: 121 FEDQIREAGGVELFIGGIGPDGHIAFNEPGSSLVSRTR 158
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 152 MRLIILEDASIVADWAARFVLQRITQFAPGPGRHSCWACPPVGRP 286
MRL+ILE + V WAA++V++RI F P R+ P P
Sbjct: 1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTP 45
>Y09064-1|CAA70285.1| 509|Drosophila melanogaster succinate
dehydrogenase flavoproteinsubunit protein.
Length = 509
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 602 GARFVERDVTVRTDTSDEQMHSASLLYEFLEGRHSTTKSD 483
G RF+ER V D + + S S+ E +EGR + + D
Sbjct: 302 GERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKD 341
>AY051472-1|AAK92896.1| 661|Drosophila melanogaster GH13919p
protein.
Length = 661
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 602 GARFVERDVTVRTDTSDEQMHSASLLYEFLEGRHSTTKSD 483
G RF+ER V D + + S S+ E +EGR + + D
Sbjct: 320 GERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKD 359
>AE013599-2872|AAN16127.1| 661|Drosophila melanogaster CG17246-PC,
isoform C protein.
Length = 661
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 602 GARFVERDVTVRTDTSDEQMHSASLLYEFLEGRHSTTKSD 483
G RF+ER V D + + S S+ E +EGR + + D
Sbjct: 320 GERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKD 359
>AE013599-2871|AAM70849.1| 661|Drosophila melanogaster CG17246-PB,
isoform B protein.
Length = 661
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 602 GARFVERDVTVRTDTSDEQMHSASLLYEFLEGRHSTTKSD 483
G RF+ER V D + + S S+ E +EGR + + D
Sbjct: 320 GERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKD 359
>AE013599-2870|AAG22257.1| 661|Drosophila melanogaster CG17246-PA,
isoform A protein.
Length = 661
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 602 GARFVERDVTVRTDTSDEQMHSASLLYEFLEGRHSTTKSD 483
G RF+ER V D + + S S+ E +EGR + + D
Sbjct: 320 GERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKD 359
>BT010094-1|AAQ22563.1| 861|Drosophila melanogaster GH26833p
protein.
Length = 861
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = -2
Query: 360 VESGHIFER*FPFLVELYQPFVHAEG----RPTGGQAQHECLPGPGAN 229
V + H+ E P +V +Y P+ +G + G H CLP P N
Sbjct: 647 VTATHMLEH--PMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRIN 692
>BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p
protein.
Length = 1064
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = -2
Query: 360 VESGHIFER*FPFLVELYQPFVHAEG----RPTGGQAQHECLPGPGAN 229
V + H+ E P +V +Y P+ +G + G H CLP P N
Sbjct: 850 VTATHMLEH--PMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRIN 895
>AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p
protein.
Length = 701
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 358 NMDEYVGLPRDHPESYHYYMWNEFFKHID-IEPSNAHVLD 474
N+ Y G+P+ H E++H + ++HI+ +E V+D
Sbjct: 298 NLRTYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMD 337
>AE014297-3842|AAO41604.1| 826|Drosophila melanogaster CG31092-PB,
isoform B protein.
Length = 826
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = -2
Query: 360 VESGHIFER*FPFLVELYQPFVHAEG----RPTGGQAQHECLPGPGAN 229
V + H+ E P +V +Y P+ +G + G H CLP P N
Sbjct: 647 VTATHMLEH--PMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRIN 692
>AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-PA,
isoform A protein.
Length = 1069
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = -2
Query: 360 VESGHIFER*FPFLVELYQPFVHAEG----RPTGGQAQHECLPGPGAN 229
V + H+ E P +V +Y P+ +G + G H CLP P N
Sbjct: 890 VTATHMLEH--PMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRIN 935
>AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA
protein.
Length = 701
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 358 NMDEYVGLPRDHPESYHYYMWNEFFKHID-IEPSNAHVLD 474
N+ Y G+P+ H E++H + ++HI+ +E V+D
Sbjct: 298 NLRTYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMD 337
>AY070868-1|AAL48490.1| 111|Drosophila melanogaster HL03025p
protein.
Length = 111
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 319 CGTLSTVCTCRGASHRWAGPARVSSRTRSELRD 221
CG ST+C+C R G R +R R+ D
Sbjct: 40 CGRRSTMCSCGLRRRRTGGQLRARNRNRARKND 72
>AE014296-3180|AAF49138.2| 111|Drosophila melanogaster CG9368-PC,
isoform C protein.
Length = 111
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 319 CGTLSTVCTCRGASHRWAGPARVSSRTRSELRD 221
CG ST+C+C R G R +R R+ D
Sbjct: 40 CGRRSTMCSCGLRRRRTGGQLRARNRNRARKND 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,113,595
Number of Sequences: 53049
Number of extensions: 646759
Number of successful extensions: 1930
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1930
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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