Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20834
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132... 33 0.17
05_06_0212 + 26410330-26410419,26410562-26410846,26411005-264112... 32 0.52
02_04_0223 + 21047240-21047304,21047577-21047706,21048783-210488... 32 0.52
05_01_0142 - 940421-940701,941262-941574 31 0.91
04_04_1148 + 31264847-31264870,31264987-31265062,31265226-31265887 30 1.6
01_07_0082 - 40965947-40967023 30 2.1
03_01_0289 + 2242584-2242931,2242973-2243005,2244158-2244241,224... 29 2.8
01_06_1682 - 39130696-39131705,39132355-39132583 29 2.8
08_02_0461 - 17432493-17432878,17434327-17434611,17435911-17436406 29 3.7
07_03_1067 + 23728642-23728690,23728832-23729010 29 3.7
03_05_0057 + 20350971-20351405 29 3.7
03_02_0996 - 13082540-13082818,13083107-13083221,13084135-130842... 29 3.7
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 4.8
02_05_1039 + 33707196-33708815 29 4.8
01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164... 29 4.8
01_02_0111 - 11220179-11220322,11220430-11220497,11220611-112206... 29 4.8
10_01_0270 - 2876907-2877547,2877838-2878012 28 6.4
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 28 6.4
06_01_0824 - 6219477-6219556,6220427-6220808,6221415-6221448,622... 28 6.4
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 28 6.4
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 28 6.4
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 28 6.4
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 28 6.4
04_01_0263 - 3532481-3532656,3532710-3532719,3532754-3532785,353... 28 8.5
03_06_0032 + 31182115-31182390,31182801-31183459,31183597-311837... 28 8.5
03_01_0474 + 3646724-3646789,3648952-3649067,3649547-3649595,364... 28 8.5
>03_01_0164 -
1326002-1326409,1326410-1326428,1326523-1326647,
1327482-1327530,1328834-1328855,1328969-1329071
Length = 241
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 253 PPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 345
P YP PP SY PQ +Y PPQ Y
Sbjct: 209 PQGGAYPPPGSYPPPGSYPPQGSYPPPQGYY 239
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 247 ADPPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 345
A PP YPQ PP SY P +Y PPQ +Y
Sbjct: 202 AYPPAG-YPQGGAYPPPGSYPPPGSY-PPQGSY 232
>05_06_0212 +
26410330-26410419,26410562-26410846,26411005-26411208,
26411636-26411692,26411859-26412926
Length = 567
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 190 EPE-PAYPVETSKYVERSTQADPPINTYPQNNYAPPQNS 303
EPE P+Y VET + V T ADP + T P + +N+
Sbjct: 404 EPEVPSYQVETEEKVAELTVADPTVETMPLQDIHNEENA 442
>02_04_0223 +
21047240-21047304,21047577-21047706,21048783-21048871,
21049592-21049647,21049721-21049776,21050163-21050202,
21050505-21050629,21050715-21050808,21051401-21051480,
21051598-21051640,21057539-21057630,21057746-21057919
Length = 347
Score = 31.9 bits (69), Expect = 0.52
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 245 KPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPPG 358
KP+ R L+ +TPP+ ++ ++ + P+ PPG
Sbjct: 296 KPLTRLPLVGPLLTPPVSVASVAKVAVRAATDPVFPPG 333
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 253 PPINTYPQNNYAPPQNSY-YPQNTYAPPQNTY 345
PP YP Y PP +Y P Y PP Y
Sbjct: 30 PPHQGYPPQGYPPPPGAYPPPPGAYPPPPGAY 61
>04_04_1148 + 31264847-31264870,31264987-31265062,31265226-31265887
Length = 253
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 570 VYTVHYWADKTGYHAYGDHLPTPPPVPAAIQ 662
V+ +Y A+ T Y+A G + P PPP+PA ++
Sbjct: 196 VHLPYYAANATPYYA-GGYYPIPPPMPAMLR 225
>01_07_0082 - 40965947-40967023
Length = 358
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 184 TFEPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPP 333
T+ P AYP T+ + S A P PQ+ Y PP P Y PP
Sbjct: 175 TYPPPTAYP--TAAKADGSAAAAYP----PQSAYPPPGKGNEPSTAYPPP 218
>03_01_0289 +
2242584-2242931,2242973-2243005,2244158-2244241,
2244640-2245782
Length = 535
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 235 RSTQADPPINTYPQNNY--APPQNSYYPQNTYAPP 333
++TQ+ PP + QN+ A P Y PQN+++ P
Sbjct: 350 QTTQSQPPSSAVSQNSVTAARPLRGYSPQNSFSAP 384
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +1
Query: 253 PPINTYP---QNNY-APPQNSYYPQNTYAPPQNTY 345
PP + YP Q++Y +PP Y P N+Y P +Y
Sbjct: 222 PPSHQYPSPPQSSYHSPPPYQYTPPNSYQAPPTSY 256
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 11/68 (16%)
Frame = +1
Query: 175 LVRTFEPEP--AYPVETSKYV---ERSTQADPPINTYPQNNYAPPQNSY------YPQNT 321
L F P P +P + +Y + S + PP P N+Y P SY Y N+
Sbjct: 208 LPNQFSPPPFNKFPPPSHQYPSPPQSSYHSPPPYQYTPPNSYQAPPTSYNHPPPPYGYNS 267
Query: 322 YAPPQNTY 345
PP N Y
Sbjct: 268 PIPPTNKY 275
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +1
Query: 271 PQNNYAPPQ---NSYYPQNTYAPPQNTY 345
P N Y PP NS PQ ++PP N+Y
Sbjct: 271 PTNKYLPPPYYFNSPPPQYQHSPPANSY 298
>08_02_0461 - 17432493-17432878,17434327-17434611,17435911-17436406
Length = 388
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 187 FEPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAP 330
+ P Y + Y+ PP TYP ++ PPQ YP Y P
Sbjct: 204 YPPHQGY-TQAQSYLLLPEAYPPPPWTYPLSSAYPPQPVGYPSGGYPP 250
>07_03_1067 + 23728642-23728690,23728832-23729010
Length = 75
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 253 PPINTYPQNNYAPPQNSYYPQNTYAPPQ 336
PP YP Y PPQ Y P PPQ
Sbjct: 35 PPAQGYPPAGY-PPQQGYPPPYAQPPPQ 61
>03_05_0057 + 20350971-20351405
Length = 144
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -3
Query: 564 HQLQCKSTSPFSPGLPLLYGIREVAFLAYVCSIGDLILVFVTAIITI 424
H +C S SP + L YG ++VAF Y + ++ +FV ++++
Sbjct: 87 HDPECCSRSPSAGPRMLSYGYKDVAFSPYSNYVRNMRKLFVVELLSM 133
>03_02_0996 -
13082540-13082818,13083107-13083221,13084135-13084235,
13084890-13085117,13085789-13086106,13086200-13086484,
13086566-13086913
Length = 557
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 630 PTPPPVPAAIQAALDQNAKEEAAQLKP 710
P PPP AA +AA ++ +EE + KP
Sbjct: 21 PPPPPAVAAEKAAAEEEEEEEEEEKKP 47
>10_08_0608 + 19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 255 ADKHLSPKQLRPPSKLILSSEYLCTSSK 338
+D LSP++ R PS L LSS YL S+K
Sbjct: 1454 SDAALSPEESRKPSGLQLSSTYLQGSTK 1481
>02_05_1039 + 33707196-33708815
Length = 539
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 531 KKGWYSYTGADGKVYTVHYWADKTGY---HAYGDHLPTPPPVPAAIQAA 668
K+ + + +D V W D+ G+ + +G +PPPVPA ++ A
Sbjct: 382 KELYLNLRSSDTWVAEYRRWMDRAGHGMPYYFGHSTLSPPPVPAVVEQA 430
>01_07_0046 -
40714701-40714763,40715266-40715343,40716398-40716462,
40717075-40717201,40717279-40717319,40717621-40717690,
40718070-40718191,40719047-40719107,40719182-40719292,
40719387-40719461,40719815-40719842,40719929-40719978,
40720228-40720290,40720385-40720426,40720562-40720631,
40720663-40720713,40721857-40722041,40722374-40722775
Length = 567
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 278 TITPPLKTHTILRIPMHLLKTPIVPP 355
T+ PP+KT T LR P + + PP
Sbjct: 163 TVVPPIKTSTTLRTPSPIPPVAVEPP 188
>01_02_0111 -
11220179-11220322,11220430-11220497,11220611-11220644,
11220735-11220766,11220900-11220959,11221276-11221729
Length = 263
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 230 WNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPPGARLH 370
W A P P R L T P + +P L P PP +RLH
Sbjct: 18 WGAAPSPAPRGELGTTGDTSPRAPTHVALLPRPLYTNPRQPPPSRLH 64
>10_01_0270 - 2876907-2877547,2877838-2878012
Length = 271
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 193 PEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSY-YPQNTYAPP 333
P P P K T PP+ +YP Y+ P Y P T +PP
Sbjct: 173 PSPPAPAAYHKPPPSYTHPAPPVYSYPTPAYSHPTPVYKQPLPTPSPP 220
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 205 YPVETSKYVERSTQAD-PPINTYPQNNYAPPQNSYYPQNTYAPP 333
YP TS + A PP YP +YA P + YP TY PP
Sbjct: 14 YPSPTSAPLATYPSASAPPYTPYPATDYAAP--AAYP--TYPPP 53
>06_01_0824 -
6219477-6219556,6220427-6220808,6221415-6221448,
6222214-6222370,6224449-6224575,6224663-6224914
Length = 343
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 193 PEPAYPVETSKYVERSTQADPPINTYPQ-NNYAPPQNSYYPQNT--YAPPQNTYR 348
P PA+ + Y+ R T PP PQ ++ PP Y+P + + PP Y+
Sbjct: 138 PPPAF--QGPPYIARGTPP-PPAQMMPQPQHHGPPATIYHPSQSWYWYPPDYQYQ 189
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 238 STQADPPINTYPQNNYAPPQNSYYPQNTYAPPQNT 342
ST + PP + P +PP S P APP N+
Sbjct: 1139 STSSSPPSSQSPPPGSSPPPASPPPSTPSAPPTNS 1173
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 594 DKTGYHAYGDHLPTPPPVPAAIQAALDQNAKEEAAQLK 707
D G+H D P PPP+ + ++ D +AK +K
Sbjct: 173 DSHGWHPEADVPPPPPPLEPPVPSSSDYHAKPPLQAVK 210
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +3
Query: 624 HLPTPPPVP-AAIQAALDQ-NAKEEAAQLKPK 713
+LP PPP P A ++AA+++ A+E A+ +PK
Sbjct: 110 NLPPPPPPPKAKVEAAVEETKAEETKAEEEPK 141
>01_06_0293 -
28254673-28254878,28255189-28255306,28255767-28255961,
28256701-28256800,28256887-28256972,28257078-28257239,
28257965-28258101,28258233-28258281,28258688-28258746,
28258862-28258896,28259384-28259433,28260173-28260332,
28260898-28260963,28261065-28261162,28261649-28261696,
28262114-28262242,28262667-28262769,28262858-28262954,
28263181-28263241,28263659-28263740,28263845-28263962,
28264039-28266325
Length = 1481
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 243 PSRSADKHLSPKQLR-PPSKLILSSEYLCTSSKHLSSHLEHAFISDF 380
PS SA LSP PP+ LI S +L + +H F+S F
Sbjct: 36 PSASAASPLSPVPASVPPTALIPGSRFLVDAFRHAGDFTASYFLSHF 82
>04_01_0263 -
3532481-3532656,3532710-3532719,3532754-3532785,
3533237-3533348,3533586-3533649,3533778-3533843,
3533946-3534073,3534205-3534342,3534427-3534539,
3534611-3534776,3535045-3535107,3535197-3535304,
3535408-3535524,3535620-3535785,3535942-3536039,
3536136-3536233,3536378-3536514,3536654-3536878,
3536971-3537176,3537286-3537525
Length = 820
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 621 DHLPTPPPVPAAIQAALDQNAKEEAAQLKP 710
D LP PPPVPA + + + E KP
Sbjct: 9 DELPPPPPVPANVVPIKADDVESEVPANKP 38
>03_06_0032 +
31182115-31182390,31182801-31183459,31183597-31183740,
31184025-31184061
Length = 371
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 229 VERSTQADPP-INTYPQ---NNYAPPQNSYYPQNTYAPP 333
VE A PP I+ PQ NYAPP + +P +PP
Sbjct: 73 VEEDVAAAPPGISLAPQFSMANYAPPPSYQHPATLVSPP 111
>03_01_0474 +
3646724-3646789,3648952-3649067,3649547-3649595,
3649641-3649697,3649743-3650993
Length = 512
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -3
Query: 648 VREEEWVNGPRKHGSQSCRPSSGRCKLCHQLQCKSTSPFSPGLP 517
V ++V G + +P+ + + H+ +C++ +P PGLP
Sbjct: 114 VSARKFVPGAKLCMQPDIKPNKRKSRSSHKERCRTQAPLLPGLP 157
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,700,747
Number of Sequences: 37544
Number of extensions: 468114
Number of successful extensions: 2072
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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